Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0355 ATGGAGTCCAGTTCTTTTGATCAGAACAGGGGTGTACCCACCCATGGTGGTCGATACATTCAATACAATGTGTATGGGAATCTATTTGAAGTTCCTAGGAAGTATACTCCACCCATAAGGCCAGTTGGGAGAGGAGCTTATGGAATTGTATGTGCTGCTTTGAACTCAGAAACAAATGAAGAGGTTGCAATTAAGAAGGTTGGCAATGCATTTGACAATAGAATTGATGCTAAAAGGACCTTACGAGAAATCAAGCTTCTTCGACACATGGATCATGAAAATATCACTGCTCTCAAAGATATTATAAGACCTCCTCAAAAGGAGAATTTCAATGATGTTTACCTTGTTTATGAATTGATGGATACGGATCTAAATCAGATAATACGGTCCAACCAATCATTGACTGATGACCATTGCCGGTTCTTTCTGTACCAGTTGTTACGAGGGCTAAAATATGTACATTCTGCGAATGTTCTACACCGTGATTTGAAACCAAGCAATTTGTTCCTCAATGCAAATTGTGACCTAAAAATTGGAGACTTTGGGCTTGCAAGGACAACTTCTGAAACCGATTTTATGACCGAGTATGTTGTTACTCGGTGGTATCGTGCACCTGAATTGCTTCTTAATTGCTCAGAATACACTGGAGCAATCGATATCTGGTCTGTTGGCTGTATACTCGGTGAAATTATTCACAGACAACCATTGTTTCCTGGAAGAGACTATGTCCATCAGCTAAAACTTATCACTGAGCTCATTGGTTCACCCGATGACTCGAGTCTCGGATTCTTACGAAGTGACAATCCACAAAGATATTTTAGACATCTTCCTCAATTCCCCAAGCAACAGTTCTCCACTAGATTTCCCACCATGTCTCCTGCTGCCATTGACTTGCTGGAGAAGATGCTAGTCTTTGATCCTACTAAGCGCATTACAGTTGAGGAGGCTCTATCTCATCCATACTTGGCACCTCTTCATGATATCAATGAGGAGCCAGTATGTCCAAGGCCTTTCAGTTTTGATTTCGAGCAACCATCGTATACCGAAGAGAACATCAAGGAACTTGTATGGAGAGAATCTGTGAAGTTCAACCCCGATCCCGCTTTTTGA 1110 41.44 MESSSFDQNRGVPTHGGRYIQYNVYGNLFEVPRKYTPPIRPVGRGAYGIVCAALNSETNEEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENITALKDIIRPPQKENFNDVYLVYELMDTDLNQIIRSNQSLTDDHCRFFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTGAIDIWSVGCILGEIIHRQPLFPGRDYVHQLKLITELIGSPDDSSLGFLRSDNPQRYFRHLPQFPKQQFSTRFPTMSPAAIDLLEKMLVFDPTKRITVEEALSHPYLAPLHDINEEPVCPRPFSFDFEQPSYTEENIKELVWRESVKFNPDPAF 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4074134 4078385 + CePI673135_06g003550.1 Cec06g0355 205092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0355 369 FunFam Mitogen-activated protein kinase 120 349 - -
Cec06g0355 369 ProSitePatterns Protein kinases ATP-binding region signature. 42 66 IPR017441 GO:0005524(InterPro)
Cec06g0355 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g0355 369 Gene3D Transferase(Phosphotransferase) domain 1 120 349 - -
Cec06g0355 369 CDD STKc_TEY_MAPK 29 365 - -
Cec06g0355 369 SMART serkin_6 36 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0355 369 ProSitePatterns MAP kinase signature. 71 174 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0355 369 ProSiteProfiles Protein kinase domain profile. 36 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0355 369 SUPERFAMILY Protein kinase-like (PK-like) 39 329 IPR011009 -
Cec06g0355 369 Pfam Protein kinase domain 40 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0355 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 29 358 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cec06g0355 369 Gene3D Phosphorylase Kinase; domain 1 19 359 - -
Cec06g0355 369 FunFam Mitogen-activated protein kinase 21 130 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0208 Cec-Chr3:2185387 Cec06g0355 Cec-Chr6:4074134 7.20E-165 dispersed
Cec06g0355 Cec-Chr6:4074134 Cec08g1048 Cec-Chr8:22357171 1.50E-159 dispersed
Cec08g1526 Cec-Chr8:26958400 Cec06g0355 Cec-Chr6:4074134 1.10E-114 transposed
Cec01g0232 Cec-Chr1:2316600 Cec06g0355 Cec-Chr6:4074134 5.90E-183 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72062 PF00069 Pkinase 6.80E-71 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0355 K20600 - csv:101215189 717.613