Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0360 ATGGCTTCTTTTCATAGAAAGCAAGCTAACCATGCTTGCTTTCTCCTCCTTTTCCTTTTCTTTTCTCTGCCATCTCTCTCCTTCTCCATCTCGAAAGATGAAGCTTCGTATCTCACTCATCGTCAACTTTTGGCTCTAAAAGAACACGATCAACTCCCAGATGATTACAAATACCAACTTGACATTCCTGACACTTTTCCAAATGAAAGGTTGAAGAAGGCTTATGTAGCCCTTCAAGCTTGGAAATTGGCCATTTATTCTGACCCTCAGAACATGACAGCCAATTGGGTTGGCGCCGATGTCTGTTCTTACACCGGCATCTACTGTACTACAGCGCTTGACGACTCAGACATGGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTATTTGCCGCCGGAAATTGGCCTTATCAACGATTTGGCGCTCTTCCATATTAACTCTAACAGGTTCTGTGGGATCATTCCTTCCAGCTTCTCCAAGCTTGTTCTCATGTTCGAGTTCGATGTCAGCAACAATCGCTTCGTCGGCCATTTTCCTCACGTCGTCCTTGAATGGCCTACCGCTAAGTTCCTTGATCTTCGGTATAATGACTTCGAAGGAGAAGTCCCCTCCACACTCTTCACCAAGGAGTTCGATGCCATTTTCTTAAACAACAACAGATTCACCTCTCTAATTCCAGACACCATCGGAAACTCAACCGTCTCTGTTGTCTCCTTTGCCAACAATGAGTTTCATGGTTGCATTCCCAGCACTATTGGCCAAATGTCCAACCTCAACCAAATTCTCTTCATCGGCAACAAGCTTGACGGCTGTTTCCCACCCGAGATTGGAAACCTCGTCAATCTTACGGTCTTCGATGCCAGCGCCAATGGTTTCATTGGCCATCTGCCCGAAACCTTATCTGGCCTCCAAAATTTGGAGATCATGGACGTTAGCAACAATGAATTGAGGGGCTCTGTTCCTGGAGGCCTTTGCAAGTTGCCTAAATTGGCTAACTTCACTTTCTCCTTTAATTATTTTGATGGCGAAGATGCAACGTGTGTTGGAACTAAGGGATCAGATAAACTCTTTGATGATGCTCAAAATTGTTTGACGAATCAACCGGAGCAAAAAGATGCAAATAAATGTAGCGTTGTCTTAAAGAAATCTGTGGATTGCGGAAACTGTAGTGGTGGTGGTTCAGGTTCTCCCGGAGTGCCAATGACTCCTGCGGATCCATTTGATCAATCTCCATCGCCGAGATATAGGTCTCCACCAACTCCAGTGAACTCTCCACCAGAATCGAACGACACCTCGGTCCCAGAAGTGGAGACTCCTCTTGCCCCATCATTGTCACCAACCTCTGCTCCGTTCTCACCACCTAACCTTGAAACCCCCAATCCATCCCCAGTTGACTCTCTCGAACCACCAGTTCACTCACCACCACCTCCAGTCCATTCACCACCACTACCGGTTCATTCCCCACCACCTCCTGTCCACTCTCCTCCACCACCAGTCCACTCTCCACCACCCCCTGTTCACTCCCCACCACCACCTGTCTCCTCCCCTCCACCACCAGTTCATTCTCCACCTCCTCTTGTTCACTCTCCACCTCTACCGGTCCACTCCCTACCACCACCGGTCCACTCCCCACCTCCACCAGTCCACTCCCCACCTCCACCGGTCCACTCCCCACCACCCCCACCAGTTCATTCTCCACCTCCTCCTGTTCACTCTCCACCACCACCGGTCCACTCCCCACCTCCACCGGTCCACTCCCCACCACCCCCTGTCCACTCCCCACCCCCACCAGTTTACTCCCCACCTCCACCGGTCCACTCCCCACCTCCCCCGGTCCACTCCCCACCACCCCCTGTCCACTCCCCACCCCCACCAGTTTACTCCCCACCTCCACCAGTCCACTCCCCACCCCCACCGGTCCATTCCCCACCCCCACCGGTCTACTCCCCACCGCCACCTATCCATTCTCCACCACCACCTGTTTACTCCCCACCGCCACCAGTCCAATCTCCACCACCTCCAACTGCATCTCCTCCTCCTCCTCCTCCCGATTATTCTCCACCGCCAACATTCGAGGACGTCATCCTCCCACCAAATATCGGCTTTCAATACACATCACCACCTCCACCACAGTTTCCTGGCTATTAA 2163 51.64 MASFHRKQANHACFLLLFLFFSLPSLSFSISKDEASYLTHRQLLALKEHDQLPDDYKYQLDIPDTFPNERLKKAYVALQAWKLAIYSDPQNMTANWVGADVCSYTGIYCTTALDDSDMEVVAGIDLNHGDIAGYLPPEIGLINDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPHVVLEWPTAKFLDLRYNDFEGEVPSTLFTKEFDAIFLNNNRFTSLIPDTIGNSTVSVVSFANNEFHGCIPSTIGQMSNLNQILFIGNKLDGCFPPEIGNLVNLTVFDASANGFIGHLPETLSGLQNLEIMDVSNNELRGSVPGGLCKLPKLANFTFSFNYFDGEDATCVGTKGSDKLFDDAQNCLTNQPEQKDANKCSVVLKKSVDCGNCSGGGSGSPGVPMTPADPFDQSPSPRYRSPPTPVNSPPESNDTSVPEVETPLAPSLSPTSAPFSPPNLETPNPSPVDSLEPPVHSPPPPVHSPPLPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVSSPPPPVHSPPPLVHSPPLPVHSLPPPVHSPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVHSPPPPVHSPPPPVYSPPPPIHSPPPPVYSPPPPVQSPPPPTASPPPPPPDYSPPPTFEDVILPPNIGFQYTSPPPPQFPGY 720
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4147492 4149654 - CePI673135_06g003600.1 Cec06g0360 205097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0360 720 Gene3D Ribonuclease Inhibitor 237 354 IPR032675 -
Cec06g0360 720 MobiDBLite consensus disorder prediction 409 430 - -
Cec06g0360 720 Pfam Leucine rich repeat N-terminal domain 77 110 IPR013210 -
Cec06g0360 720 MobiDBLite consensus disorder prediction 396 720 - -
Cec06g0360 720 SUPERFAMILY L domain-like 83 351 - -
Cec06g0360 720 MobiDBLite consensus disorder prediction 431 450 - -
Cec06g0360 720 Gene3D Ribonuclease Inhibitor 72 236 IPR032675 -
Cec06g0360 720 MobiDBLite consensus disorder prediction 451 699 - -
Cec06g0360 720 FunFam Leucine-rich repeat extensin-like protein 1 75 236 - -
Cec06g0360 720 PRINTS Proline rich extensin signature 497 514 - -
Cec06g0360 720 PRINTS Proline rich extensin signature 459 480 - -
Cec06g0360 720 PRINTS Proline rich extensin signature 480 496 - -
Cec06g0360 720 PRINTS Proline rich extensin signature 444 456 - -
Cec06g0360 720 PRINTS Proline rich extensin signature 423 439 - -
Cec06g0360 720 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 254 348 - -
Cec06g0360 720 Pfam Leucine Rich Repeat 310 332 IPR001611 GO:0005515(InterPro)
Cec06g0360 720 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 526 IPR051582 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2162 Cec-Chr5:33235578 Cec06g0360 Cec-Chr6:4147492 3.50E-32 dispersed
Cec06g0360 Cec-Chr6:4147492 Cec06g0364 Cec-Chr6:4166402 6.20E-08 dispersed
Cec06g0360 Cec-Chr6:4147492 Cec06g0361 Cec-Chr6:4154996 6.20E-08 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0360 - - - 0.0