Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0364 ATGGCTTCTCTTCATAGAAAGCAAGCTAACCATGCTTGCTTTCTCCTCATCTTCCTTTTCTTTTCACTGCCATCTCTCTCCGTCTCCATCTCAGAAGCCGAAGCTTCGTATCTCACTCGCCGTCAACTTTTGGCTCTCAAAGAACACGATCAACTCCCAGATGATTACAAATACCAACTTGACATTCCTGACACTTTTCCAAATGAAAGGTTGAAAAAGGCTTATGTAGCCCTTCAAGCTTGGAAATTGGCCATTTATTCTGACCCTCAGAACATGACAGCCAATTGGGTTGGCGCCGATGTCTGTTCTTACACCGGCATCTACTGTACTACGGCGCTTGACAACTCAGACATGGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTATTTGCCGCCAGAAATTGGCCTCATCACTGATTTGGCTCTCTTCCATATTAACTCTAACAGGTTCTGTGGGATCGTTCCTTCCAGCTTCTCCAAGCTTGTTCTCATGTTCGAGTTCGATGTCAGCAACAACCGCTTCGTCGGCCATTTTCCTCACGTCGTCCTTGAATGGCCCACCGCTAAGTTCCTTGATCTCAGGTATAATGACTTCGAAGGAGAAATCCCCTCCACACTCTTCACCAAGGAGTTCGATGCCATTTTCTTAAACAACAACAGATTCACCTCTCTAATTCCGGACACCATCGGAAACTCAACCGTCTCCGTTGTCTCCTTTGCCAACAATGAGTTCCATGGCTGCATTCCCAGCACTGTTGGCCAAATGTCCAACCTCAACCAAATTCTCTTCATCGGCAACAAGCTTGGCGGTTGTTTCCCACCCGAGATCGGAAACCTCGTCAATCTTACAGTCTTCGATGTGAGCGCCAATGGCTTCGTGGGCCAGCTGCCCGAAACCTTATCGGGCCTCCAAAATTTGGAGATTATGGACGTTAGCAACAATGAATTGAGGGGCTCTGTTCCTGGAGGCTTTTGCAAGTTGCCCAAATTAGCTAACTTCACTTTCTCCTTTAATTATTTTGATGGCAAAGATGCAGCGTGTGTTGGAACTAAGGGATCAGATAAACTCTTTGATGATGCTCAAAATTGTTTGGCCAATCGACCGGAGCAGAAAGATGCAAACAAATGTAGCATTGTCCTAAAGAAATCAGTGGACTGTGGAAACTGTGGTGGTGGTGGTTCGGGTTCTCCTGGAGTGCCAATGACTCCTGAGGATCCATTTGATCAATCTCCATCGCCGAGATATAGGTCTCCACCACCTCCAGTGACCTCTCCACCTGAATCGATCGACACCTCGGTCCCAGAAGTGGGGACTCCTCCTTCTCCAAGTGAAACTTCTATTACATCATCACCACCTTCTCCAATTGAGTATTCACCACCAACCTCTGCACCACAATTGTCACCAACCTCTGCTCCATCATTATCACCAACCTCCTCTCCGATCTCACCACCTACCCTTGAAACCCCCAGTCCATCCCCAGCTGAATCTCCCGAACGACCACTTCATTCACCACCACCCCCAGTCTATTCCCCCCCACCACCAGTCTATTCACCTCCACCACCAGTTCATTCCCCACCACCTCTTGTCCACTCTCCTCCACCACCAGTCCATTCTCCTCCACCACCGGTTCATTCCCCACCACCTCCTGTCCACTCTCCTCCACCACCGGTCCATTCTCCACCACCTCCTGTCCACTCTCCTCCACCACCAGTCCACTCCCCACCACCTCCAGTCCACTCCCCACCACCACCTGTCTCCTCTCCTCCACCACCAGTTCATTCCCCACCTCCTCCTGTCCACTCTCCACCACCACCTACCCACTCCCCACCACCACCAGTCCACTCTCCACCACCCCCCGTCCACTCACCACCACCACCCGTCCACTCCCCACCACCACCGGTCCACTCACCACCACCCCCCATCCACTCACCACCACCACCCGTCCACTCTCCACCCCCACCAGTTTACTCCTCACCCCCACCAGTTCATTCTCCACCCCCACCGGTTCACTCCCCACCCCCACCAGTCCATTCTCCACCACCGCCTGTTTACTCCCCACCGCCACCAGTCCAATCTCCACCACCTCCGACTGCATCTCCTCCTCCTCCTCCTCCCAATTCTTCTCCACCGCCATCATTCGAGGACGTCATCCTCCCGCCAAATATCGGCTTCCAATACGCATCACCACCTCCTCCACAGTTTCCTGGCTATTGA 2229 51.95 MASLHRKQANHACFLLIFLFFSLPSLSVSISEAEASYLTRRQLLALKEHDQLPDDYKYQLDIPDTFPNERLKKAYVALQAWKLAIYSDPQNMTANWVGADVCSYTGIYCTTALDNSDMEVVAGIDLNHGDIAGYLPPEIGLITDLALFHINSNRFCGIVPSSFSKLVLMFEFDVSNNRFVGHFPHVVLEWPTAKFLDLRYNDFEGEIPSTLFTKEFDAIFLNNNRFTSLIPDTIGNSTVSVVSFANNEFHGCIPSTVGQMSNLNQILFIGNKLGGCFPPEIGNLVNLTVFDVSANGFVGQLPETLSGLQNLEIMDVSNNELRGSVPGGFCKLPKLANFTFSFNYFDGKDAACVGTKGSDKLFDDAQNCLANRPEQKDANKCSIVLKKSVDCGNCGGGGSGSPGVPMTPEDPFDQSPSPRYRSPPPPVTSPPESIDTSVPEVGTPPSPSETSITSSPPSPIEYSPPTSAPQLSPTSAPSLSPTSSPISPPTLETPSPSPAESPERPLHSPPPPVYSPPPPVYSPPPPVHSPPPLVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVSSPPPPVHSPPPPVHSPPPPTHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPIHSPPPPVHSPPPPVYSSPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVQSPPPPTASPPPPPPNSSPPPSFEDVILPPNIGFQYASPPPPQFPGY 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4166402 4168630 + CePI673135_06g003640.1 Cec06g0364 205101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0364 742 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 739 IPR051582 -
Cec06g0364 742 SUPERFAMILY L domain-like 83 347 - -
Cec06g0364 742 Pfam Leucine rich repeat 286 343 IPR001611 GO:0005515(InterPro)
Cec06g0364 742 MobiDBLite consensus disorder prediction 433 457 - -
Cec06g0364 742 FunFam Leucine-rich repeat receptor protein kinase EMS1 237 326 - -
Cec06g0364 742 Gene3D Ribonuclease Inhibitor 73 243 IPR032675 -
Cec06g0364 742 MobiDBLite consensus disorder prediction 482 721 - -
Cec06g0364 742 MobiDBLite consensus disorder prediction 467 481 - -
Cec06g0364 742 FunFam Leucine-rich repeat extensin-like protein 1 75 236 - -
Cec06g0364 742 MobiDBLite consensus disorder prediction 397 742 - -
Cec06g0364 742 MobiDBLite consensus disorder prediction 409 432 - -
Cec06g0364 742 Gene3D Ribonuclease Inhibitor 244 383 IPR032675 -
Cec06g0364 742 Pfam Leucine rich repeat N-terminal domain 77 110 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0360 Cec-Chr6:4147492 Cec06g0364 Cec-Chr6:4166402 6.20E-08 dispersed
Cec06g0361 Cec-Chr6:4154996 Cec06g0364 Cec-Chr6:4166402 5.90E-09 dispersed
Cec06g0362 Cec-Chr6:4158936 Cec06g0364 Cec-Chr6:4166402 3.40E-32 dispersed
Cec06g0364 Cec-Chr6:4166402 Cec06g1179 Cec-Chr6:23995130 2.80E-40 dispersed
Cec06g0363 Cec-Chr6:4159538 Cec06g0364 Cec-Chr6:4166402 1.90E-06 tandem
Cec06g0364 Cec-Chr6:4166402 Cec06g0365 Cec-Chr6:4170135 7.50E-09 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0364 - - - 0.0