Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0365 ATGGCTTCTCTTCATAGAAAGCAAGCTAACCATGCTTGCTTTCTCCTCCTCTTCCTCTTCTTGTCTCTGCCATCTCTCTCCGTCTCCATCTCGGAAGCCGAAGCTTCGTATCTCACTCGCCGTCAACTTTTGGCTCTCAAAGAACACGATCAACTCCCAGATGATTACAAATACCAACTTGACATTCCTGACACTTTTCCAAATGAAAGGTTGAAAAAGGCTTATGTAGCCCTTCAAGCTTGGAAATTGGCCATTTATTCTGACCCTCAGAACATGACAGCCAATTGGGTTGGCGCCGATGTCTGTTCTTACACCGGCATCTACTGTACTACGGCGCTTGACAACTCAGACATGGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTATTTGCCGCCAGAAATTGGCCTCATCACCGATTTGGCTCTCTTCCATATTAACTCTAACAGGTTCTGTGGGATCATTCCTTCCAGCTTCTCCAAGCTTGTTCTCATGTTCGAGTTCGATGTCAGCAACAACCGCTTCGTCGGCCATTTTCCTCTCGTCGTCCTTGAATGGTCCACCGCTAAGTTCCTTGATCTCAGGTATAATGACTTCGAAGGAGAAATCCCCTCCACACTCTTCACCAAGGAGTTCGATGCCATTTTCTTAAACAACAACAGATTCACCTCTCTAATTCCAGACACCATCGGAAACTCAACCGTCTCCGTTGTCTCCTTTGCCAACAATGAGTTCCATGGCTGCATTCCCAGCACTGTTGGCCAAATGTCCAACCTCAACCAAATTCTCTTCATCGGCAACAAGCTTGGCGGTTGTTTCCCACCCGAGATCGGAAACCTCGTCAATCTTACGGTCTTCGATGCGAGTGCCAATGGCTTCATCGGCCAACTGCCTGAAACCTTATATGGCCTCCAAAATCTTGAGATTATGGACGTCAGCAACAATGAATTGAGGGGCTCTATTCCTGGAGGCCTTTGCAAGTTGCCCAAATTAGCTAACTTCACTTTCTCTTTTAATTATTTTGATGGTGAAGATGCAGCGTGTGTTGGAACTAAGGGATCAGAGAAACTCTTTGATGATGCTCAAAATTGTTTGGCCAATCGACCGGAGCAAAAAGATGCAAACAAATGTAGCATTGTCCTAAAGAAATCAGTGGACTGTGGAAACTGTGGTGGTGGTGGTTCGGGTTCTCCTGGAGTGCCAATGACTCCTGAGGATCCATTTGATCAATCTCCATCGCCGAGATATAGGTCTCCACCACCTCCAGTGACCTCTCCACCTCCTGAATCGATTGTATCACCAGTTCATTCACCACCACCTCCCGTTCATTCACCACCAACCCCAGTCCATTCCCCACCACCACCGGTCCATTCTCCTCCACCACCAGTTCATTCCCCACCACCTCCTGTCAACTCTCCTCCACCACCGGTCCATTCTCCTGTACCACCGGTTCATTCCCCACCACCTCCTGTCCACTCTCCTCCACTGCCAGTCCACTCTCCTCCACCGCCAATCCACTCCCCACCACCACCTGTCTCCTCTCCTCCATCACCAGTTCACTCCCCACCTCCACCTGTCTACTCTCCACCACCACCGGTCCACTCCCCACCTCTACCGATCCATTCTCCAGCACCACCAGTCCACTCCCCACCTCCACCAGTCCACTCCCTACCCCCACCGGTCTACTTTCCACCGCCACCGGTCTACTCCCCACCACCCCCGGTCCATTCTCCACCAACTCCTGTTTACTCTCCACCGCCACCAGTCCAATCTCCACCACCTCCAACTGCATCTCCTCCTCCTTCTCCTCCTCCTCCCGATTCTTCTCCACCGCCATCATTCGAGGACATCATCCTCCCCCCAAATATCGGCTTCCAATATGCATCACCACCTCCACCACAATTCCCTGGCTACTGA 1929 50.75 MASLHRKQANHACFLLLFLFLSLPSLSVSISEAEASYLTRRQLLALKEHDQLPDDYKYQLDIPDTFPNERLKKAYVALQAWKLAIYSDPQNMTANWVGADVCSYTGIYCTTALDNSDMEVVAGIDLNHGDIAGYLPPEIGLITDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPLVVLEWSTAKFLDLRYNDFEGEIPSTLFTKEFDAIFLNNNRFTSLIPDTIGNSTVSVVSFANNEFHGCIPSTVGQMSNLNQILFIGNKLGGCFPPEIGNLVNLTVFDASANGFIGQLPETLYGLQNLEIMDVSNNELRGSIPGGLCKLPKLANFTFSFNYFDGEDAACVGTKGSEKLFDDAQNCLANRPEQKDANKCSIVLKKSVDCGNCGGGGSGSPGVPMTPEDPFDQSPSPRYRSPPPPVTSPPPESIVSPVHSPPPPVHSPPTPVHSPPPPVHSPPPPVHSPPPPVNSPPPPVHSPVPPVHSPPPPVHSPPLPVHSPPPPIHSPPPPVSSPPSPVHSPPPPVYSPPPPVHSPPLPIHSPAPPVHSPPPPVHSLPPPVYFPPPPVYSPPPPVHSPPTPVYSPPPPVQSPPPPTASPPPSPPPPDSSPPPSFEDIILPPNIGFQYASPPPPQFPGY 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4170135 4172063 + CePI673135_06g003650.1 Cec06g0365 205102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0365 642 Gene3D Ribonuclease Inhibitor 73 242 IPR032675 -
Cec06g0365 642 MobiDBLite consensus disorder prediction 577 642 - -
Cec06g0365 642 PRINTS Proline rich extensin signature 455 472 - -
Cec06g0365 642 PRINTS Proline rich extensin signature 473 498 - -
Cec06g0365 642 PRINTS Proline rich extensin signature 414 435 - -
Cec06g0365 642 PRINTS Proline rich extensin signature 438 454 - -
Cec06g0365 642 FunFam Leucine-rich repeat extensin-like protein 1 75 236 - -
Cec06g0365 642 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 254 348 - -
Cec06g0365 642 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 559 IPR051582 -
Cec06g0365 642 MobiDBLite consensus disorder prediction 397 560 - -
Cec06g0365 642 MobiDBLite consensus disorder prediction 577 621 - -
Cec06g0365 642 Pfam Leucine rich repeat N-terminal domain 77 110 IPR013210 -
Cec06g0365 642 Pfam Leucine Rich Repeat 310 332 IPR001611 GO:0005515(InterPro)
Cec06g0365 642 MobiDBLite consensus disorder prediction 409 560 - -
Cec06g0365 642 SUPERFAMILY L domain-like 83 348 - -
Cec06g0365 642 Gene3D Ribonuclease Inhibitor 243 379 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0363 Cec-Chr6:4159538 Cec06g0365 Cec-Chr6:4170135 1.40E-06 dispersed
Cec06g0365 Cec-Chr6:4170135 Cec06g1179 Cec-Chr6:23995130 4.60E-39 dispersed
Cec06g0364 Cec-Chr6:4166402 Cec06g0365 Cec-Chr6:4170135 7.50E-09 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0365 - - - 0.0