Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0423 | GCATTGAAAGGGAAGGTATCAGAAGACGAAGGCAGAAAAATCTTCCAACAGTTAATTGATGGTGTGAGTTACTGCCATAGGAAAGGTGTTTACCATAGGGATCTCAAGCTAGAGAACATACTTGTGGATGCCAGAGGAAATATCAAGATATCTGATTTTGGATTAAGTGCATTACAAGAGCATTTAAGGGAAGATGGTCTGCTTCACACTACTTGTGGAAGCCCAAACTACGTGGCACCCGAGATTCTTGCTAATAGAGGCTATGATGGTGTGACGTCAGATATTTGGTCTTGCGGTGTTATCTTGTTTGTAATTCTCACAGGATCACTCCCTTTCGATGACACAAATTTGTGTGTCCTTTATCACAAGATCTTGAAAGGAGAAACTCAATTACCAATGTGGCTGTCACAAGGGGCCCAAAATTTAGTTAGACGGATTCTTGATCCCAACCCTATTTCTAGGGCAACTATGGAATCCATCAAAATGGACCATTGGTTTAGTAAGGACTATCATCCACCCAATTTTTACGATGAAGATCAAGAGGATATATACGTGGCCATCTCAACAAATCAAGAGAGCTCAGAGTATCCCACTACTATAAATGCTTTTCAACTGATTGGAATGTCCTTATGCTTGGACCTTTCAGGTTTCTTTGAGGAAGAGGACATTTCGGAAAGGAAGATAAGATTTACAACCAATCACTCTACAAAAGGAGATATCCTTAAGCGAATGGAGGATCTTGTAACAGATATGGGGTTTCTTGTCCAAAAGAAGGAAGGAAGGTTGAAAGTAATTAGAGAGGAAAGGGGTGAGAATGGTGTGGACAGCATATTTTCAATATCAGCTCAGGTTTTTGAGATATGTCCATCACTATTCGTTGTAGAATTAAGAAAGTTGCATGGAGATTCATCTTCATTTAGACAGATCGTCGCAACTTACGCTTCCGGCGAAATGGCCAGCGGCTTGCAGATGAGTCCTCAGTTAGAGCAGATCCATGGGGAAATTCGTGACAATTTTCGGGCTCTTTCAAATGGGTTCCAAAGACTGGATAAGATCAAAGATTCCAGTAGACAAAGTAAGCAGTTGGAGGAGCTCACAGGAAAGATGAGGGAATGTAAAAGATTAATAAAAGATTTTGACCGTGAAATCAAGGAGGAAGAGAGTAAAAATCCACCGGAAGTGAATAAGCAGCTCAATGACGAGAAGCAATCAATGATCAAGGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTATATGAATAGTCTTGGTAATAAAAGGGTTGAGCTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCTGATGATAATGTTCGGATGGCCTCATCAATGACAAATCAAGAACTTATAGATGCTGGGAAGAAGACAATGGATGACACCGATCAGGCTATTGAACGCACGCAAAAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGTTACATTAAAAGGCCAAACTGAGCAAATGGGCCGTATAGTAAATGAGCTTGACACAATTAATTTTTCAATTAAGAAGGCTTCCCAGCTTGTGAAAGAAATTGGCAGACAGGTTGCTACAGATAAATGCATCATGCTGTTTCTGTTCCTAATTGTCTGTGGAGTAATAGCCATTATTGTAGTTAAGATTGTGAACCCCAACAACAAAAACATCAGGGATATTCCTGGATTGGCACCTCCAGCTCCTGCAAGGAGGCTTTTGTATCTGAGGACACCTGAACATTTCAAGTAA | 1758 | 40.61 | ALKGKVSEDEGRKIFQQLIDGVSYCHRKGVYHRDLKLENILVDARGNIKISDFGLSALQEHLREDGLLHTTCGSPNYVAPEILANRGYDGVTSDIWSCGVILFVILTGSLPFDDTNLCVLYHKILKGETQLPMWLSQGAQNLVRRILDPNPISRATMESIKMDHWFSKDYHPPNFYDEDQEDIYVAISTNQESSEYPTTINAFQLIGMSLCLDLSGFFEEEDISERKIRFTTNHSTKGDILKRMEDLVTDMGFLVQKKEGRLKVIREERGENGVDSIFSISAQVFEICPSLFVVELRKLHGDSSSFRQIVATYASGEMASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIKDFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVSEPTADDNVRMASSMTNQELIDAGKKTMDDTDQAIERTQKVVEQTIEVGTQTAVTLKGQTEQMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNNKNIRDIPGLAPPAPARRLLYLRTPEHFK | 585 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4770123 | 4785761 | + | CePI673135_06g004230.1 | Cec06g0423 | 205160 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0423 | 585 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 30 | 42 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec06g0423 | 585 | Gene3D | Kinase associated domain 1, KA1 | 194 | 329 | - | - | |
Cec06g0423 | 585 | CDD | CIPK_C | 201 | 309 | - | - | |
Cec06g0423 | 585 | CDD | SNARE_SNAP25N_23N_29N_SEC9N | 460 | 522 | IPR044766 | GO:0005484(InterPro)|GO:0031201(InterPro) | |
Cec06g0423 | 585 | Gene3D | - | 452 | 531 | - | - | |
Cec06g0423 | 585 | SMART | serkin_6 | 1 | 166 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0423 | 585 | SUPERFAMILY | SNARE fusion complex | 451 | 524 | - | - | |
Cec06g0423 | 585 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 3 | 307 | - | GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Cec06g0423 | 585 | FunFam | novel plant SNARE 11 | 452 | 531 | - | - | |
Cec06g0423 | 585 | ProSiteProfiles | NAF domain profile. | 195 | 219 | IPR018451 | GO:0007165(InterPro) | |
Cec06g0423 | 585 | Coils | Coil | 362 | 389 | - | - | |
Cec06g0423 | 585 | Pfam | NAF domain | 197 | 257 | IPR004041 | GO:0007165(InterPro) | |
Cec06g0423 | 585 | Pfam | Protein kinase domain | 3 | 166 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0423 | 585 | SMART | tSNARE_6 | 456 | 523 | IPR000727 | - | |
Cec06g0423 | 585 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 189 | IPR011009 | - | |
Cec06g0423 | 585 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 173 | - | - | |
Cec06g0423 | 585 | FunFam | Maternal embryonic leucine zipper kinase | 2 | 196 | - | - | |
Cec06g0423 | 585 | ProSiteProfiles | Protein kinase domain profile. | 1 | 166 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0423 | 585 | FunFam | Non-specific serine/threonine protein kinase | 195 | 320 | - | - | |
Cec06g0423 | 585 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 461 | 523 | IPR000727 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g0819 | Cec-Chr5:6899384 | Cec06g0423 | Cec-Chr6:4770123 | 5.70E-113 | dispersed | |
Cec06g0423 | Cec-Chr6:4770123 | Cec10g0213 | Cec-Chr10:2333718 | 2.90E-88 | dispersed | |
Cec06g0420 | Cec-Chr6:4709224 | Cec06g0423 | Cec-Chr6:4770123 | 1.30E-20 | proximal | |
Cec06g0422 | Cec-Chr6:4751714 | Cec06g0423 | Cec-Chr6:4770123 | 6.00E-144 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72065 | PF00069 | Pkinase | 1.10E-41 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0423 | K07198 | - | csv:101206030 | 473.396 |