Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0423 GCATTGAAAGGGAAGGTATCAGAAGACGAAGGCAGAAAAATCTTCCAACAGTTAATTGATGGTGTGAGTTACTGCCATAGGAAAGGTGTTTACCATAGGGATCTCAAGCTAGAGAACATACTTGTGGATGCCAGAGGAAATATCAAGATATCTGATTTTGGATTAAGTGCATTACAAGAGCATTTAAGGGAAGATGGTCTGCTTCACACTACTTGTGGAAGCCCAAACTACGTGGCACCCGAGATTCTTGCTAATAGAGGCTATGATGGTGTGACGTCAGATATTTGGTCTTGCGGTGTTATCTTGTTTGTAATTCTCACAGGATCACTCCCTTTCGATGACACAAATTTGTGTGTCCTTTATCACAAGATCTTGAAAGGAGAAACTCAATTACCAATGTGGCTGTCACAAGGGGCCCAAAATTTAGTTAGACGGATTCTTGATCCCAACCCTATTTCTAGGGCAACTATGGAATCCATCAAAATGGACCATTGGTTTAGTAAGGACTATCATCCACCCAATTTTTACGATGAAGATCAAGAGGATATATACGTGGCCATCTCAACAAATCAAGAGAGCTCAGAGTATCCCACTACTATAAATGCTTTTCAACTGATTGGAATGTCCTTATGCTTGGACCTTTCAGGTTTCTTTGAGGAAGAGGACATTTCGGAAAGGAAGATAAGATTTACAACCAATCACTCTACAAAAGGAGATATCCTTAAGCGAATGGAGGATCTTGTAACAGATATGGGGTTTCTTGTCCAAAAGAAGGAAGGAAGGTTGAAAGTAATTAGAGAGGAAAGGGGTGAGAATGGTGTGGACAGCATATTTTCAATATCAGCTCAGGTTTTTGAGATATGTCCATCACTATTCGTTGTAGAATTAAGAAAGTTGCATGGAGATTCATCTTCATTTAGACAGATCGTCGCAACTTACGCTTCCGGCGAAATGGCCAGCGGCTTGCAGATGAGTCCTCAGTTAGAGCAGATCCATGGGGAAATTCGTGACAATTTTCGGGCTCTTTCAAATGGGTTCCAAAGACTGGATAAGATCAAAGATTCCAGTAGACAAAGTAAGCAGTTGGAGGAGCTCACAGGAAAGATGAGGGAATGTAAAAGATTAATAAAAGATTTTGACCGTGAAATCAAGGAGGAAGAGAGTAAAAATCCACCGGAAGTGAATAAGCAGCTCAATGACGAGAAGCAATCAATGATCAAGGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTATATGAATAGTCTTGGTAATAAAAGGGTTGAGCTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCTGATGATAATGTTCGGATGGCCTCATCAATGACAAATCAAGAACTTATAGATGCTGGGAAGAAGACAATGGATGACACCGATCAGGCTATTGAACGCACGCAAAAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGTTACATTAAAAGGCCAAACTGAGCAAATGGGCCGTATAGTAAATGAGCTTGACACAATTAATTTTTCAATTAAGAAGGCTTCCCAGCTTGTGAAAGAAATTGGCAGACAGGTTGCTACAGATAAATGCATCATGCTGTTTCTGTTCCTAATTGTCTGTGGAGTAATAGCCATTATTGTAGTTAAGATTGTGAACCCCAACAACAAAAACATCAGGGATATTCCTGGATTGGCACCTCCAGCTCCTGCAAGGAGGCTTTTGTATCTGAGGACACCTGAACATTTCAAGTAA 1758 40.61 ALKGKVSEDEGRKIFQQLIDGVSYCHRKGVYHRDLKLENILVDARGNIKISDFGLSALQEHLREDGLLHTTCGSPNYVAPEILANRGYDGVTSDIWSCGVILFVILTGSLPFDDTNLCVLYHKILKGETQLPMWLSQGAQNLVRRILDPNPISRATMESIKMDHWFSKDYHPPNFYDEDQEDIYVAISTNQESSEYPTTINAFQLIGMSLCLDLSGFFEEEDISERKIRFTTNHSTKGDILKRMEDLVTDMGFLVQKKEGRLKVIREERGENGVDSIFSISAQVFEICPSLFVVELRKLHGDSSSFRQIVATYASGEMASGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIKDFDREIKEEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVSEPTADDNVRMASSMTNQELIDAGKKTMDDTDQAIERTQKVVEQTIEVGTQTAVTLKGQTEQMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNNKNIRDIPGLAPPAPARRLLYLRTPEHFK 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4770123 4785761 + CePI673135_06g004230.1 Cec06g0423 205160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0423 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 30 42 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g0423 585 Gene3D Kinase associated domain 1, KA1 194 329 - -
Cec06g0423 585 CDD CIPK_C 201 309 - -
Cec06g0423 585 CDD SNARE_SNAP25N_23N_29N_SEC9N 460 522 IPR044766 GO:0005484(InterPro)|GO:0031201(InterPro)
Cec06g0423 585 Gene3D - 452 531 - -
Cec06g0423 585 SMART serkin_6 1 166 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0423 585 SUPERFAMILY SNARE fusion complex 451 524 - -
Cec06g0423 585 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 3 307 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cec06g0423 585 FunFam novel plant SNARE 11 452 531 - -
Cec06g0423 585 ProSiteProfiles NAF domain profile. 195 219 IPR018451 GO:0007165(InterPro)
Cec06g0423 585 Coils Coil 362 389 - -
Cec06g0423 585 Pfam NAF domain 197 257 IPR004041 GO:0007165(InterPro)
Cec06g0423 585 Pfam Protein kinase domain 3 166 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0423 585 SMART tSNARE_6 456 523 IPR000727 -
Cec06g0423 585 SUPERFAMILY Protein kinase-like (PK-like) 4 189 IPR011009 -
Cec06g0423 585 Gene3D Transferase(Phosphotransferase) domain 1 1 173 - -
Cec06g0423 585 FunFam Maternal embryonic leucine zipper kinase 2 196 - -
Cec06g0423 585 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0423 585 FunFam Non-specific serine/threonine protein kinase 195 320 - -
Cec06g0423 585 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 461 523 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0819 Cec-Chr5:6899384 Cec06g0423 Cec-Chr6:4770123 5.70E-113 dispersed
Cec06g0423 Cec-Chr6:4770123 Cec10g0213 Cec-Chr10:2333718 2.90E-88 dispersed
Cec06g0420 Cec-Chr6:4709224 Cec06g0423 Cec-Chr6:4770123 1.30E-20 proximal
Cec06g0422 Cec-Chr6:4751714 Cec06g0423 Cec-Chr6:4770123 6.00E-144 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72065 PF00069 Pkinase 1.10E-41 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0423 K07198 - csv:101206030 473.396