Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0427 ATGCATGTAGCAACAATGGCACTCCAAGAGTTACCGGTTGATGTTCCACATTTTGACCTTGAGGAAGATCCATCTTTCTGGAAGGATCACAACGTGCAGGTAATGATACGTATTCGACCCTTGAGTACTACGGAGAGAGACTCTCAAGGTTATGGTCGATGCTTGCGACAGGAAACCGCAAAAACTCTTGTGTGGCTTGGTCACCCAGAAACCAGATTCACCTTTGATCATATAGCTTGCGAAACAATATCACAGACTGGTAGTGGCAAAACATATACCATGATGGGTGGGATATACGAGGTGGAGGGCAAACTCAACGAAGATTGTGGACTAACTTTACGCATTTTTGAGCATTTGTTTACAAGAATTGGAATGGAAGAAAAGAGCAATCAGGGTGTCAAATTGAAATATAGCTGCAAATGTTCCTTTCTAGAAATTTATAATGAGCAAATAACAGACCTCTTGGAACCTTCATCAACTAATTTGCAACTCAGGGAAGACCTGAAGAAAGGAGTCTACGTAGAGAATCTCACAGAACACAGTGTCACAACTATAAACGATGTCGTCAAGCTTCTCTTGCAGGGTGCTGCAAACAGAAAGATGGCTGCTACATATATGAACAGTGAGAGTAGCCGCTCCCACAGTGTTTTTACTTGTATAATTGAAAGTCACTGGGAGAAAGATTCTAGAACTCACTTTAGATTTGCGAGCTCAGCCAATGAAACACTAAGCACTCTCAAATTTGCACAGCGTGCCAAACAGATTCAGAATAATGCAAAAGTTAACGAGTGTGCTTCAGGCGATGAAACTGCCCTCCAAAGGCAAATCCTACACTTGAAGGGTCAGTTGTCCTTTCTACTGAAGCACAGTAATTTTCCAAGGTCTATACTAAATAGCGTTCCAAGACTTGAAGAGTCTGGAGTAAGTGCTCCGTTTGAAGGCTATGATCCATTAGGGGGTAGAATGCAAACTGAAAATCGTAAGATGAAACTCATGGAAGCTTCCTTAATTGGTGCATTAAGGAGGGAAGAAGTGGCCAATGCTACAATAAAAAAGCTTGAGTTCGAGATTGAACACATGAAGTGCTTGGCTTTCCAACAAGAGGAGGATGGTCAACGTACTAAAATGTTGTTAAAATTTCGTGAGGAGAAGATCAGACAACTTGAATTGTTTTTCGGTGGGATGCTGTCCGCTGACCAATATCTTTTAGAGGAAAACAAGGCCTTAGCGGTAGAGATTAAGATGCTTCAAGCAAAGATTAACCAAAATCCAGAATTGACAAGAGTCTCTTTTGAGAATTCTAAACTCACCGAGCAACTTCAAGTGTATCAAAATTTTTATGAGCAAGGAGAGCGTGAAGCGTTGCTAACTGAAGTTTCAGAATTACGCAATGAGCTTCTGATTGCTCTGGGAAAAAACTCAACCATATCTGAACAAGATAAATATCAGGATGAAACAATGTCCATCAAGAGTTATACCCAAGATGACACGCTATCTTATATTACAGGAAGTGATGAGAACTTCGAAAATACAATAGGTCAAGGTTCAGATAATGAACTCGGAGCAAAGCCCATTTGTTCTCAGAAAGATCTGATCGATGCAAAAATGTTGGCTCAATCAATGGATTCAGATAACACTATGCAAGCTGAGAATCATGGATGCAAGCAGTTCAAACACTGCATGGTGGAAAACTTCTTAAATAAATCCAATGTTACAAAATGTCAAAATGAAGGAAATGTGATGAACCAACATGAAGATGTTGACAACAAAACTTTGCAAGTCAAGGTGGAAAACTTGACTAGGGAACTTGAGGAAGTCAGATTATCTAATATTCAGTATCAAGAAAATCAGAACCAACAGAACCAAAGTGAAGATGTGCGTCAACAGGTTGAGATGGAGACAGCCAATACAATTCTTCAATTACAGGAAGAGGTTGAAACTCTTCAGTTAGAACTTAATGATAGTTTACATGGCTTAGCCCAGGAAAATACACGACTGAAAGATTTGTTGTCTGCAAAAAATGAGGAGATGAGGATGCTATGTATTGACTGGGAAACAGCAATGGTAGAACTAACAAATTTCCTTCTCGATGGTTCTAAATCTATCAGAGATGCACATGGGCAGATAGAAAGTATCGCTAATTTGTTTCCTAAAGTAAATGTTGGAATTAGTGAACAAGTGCAGCAGGCGATCGAAGTTTGTATCGAAAAAGAAGAAACAATTCTGTTATTGCATAAAAGTTTGGAAGATGCACGACTCATGGTGAAAGAAATGGAGCTGAAGTTAGATTCTCTGAAGGAAGCAACACTCGCCCTAAATGAATCACAACAAATGGATGATAATATTAGTGCTGCAGGTGCTAAACCATTGAGCACTCAGATGACTGACGAGAATATTATGGTAGAGTTTCTAGGCAAAAGACTTGGAGTTAAGAATGATCAGTTAAGTGAGGCAGAGAAATCTGCTGATGCTGCAGTCATTGCAGTAGAATGGTCATCCCAACCTCAGGAGCTGGCCTGCTGTTATAACATTGAGAGAGAGATGCCCATCTCAAAGTTGGATGTTTCATCTCAAAGAAGCAGTCACATCTTTGATGATGTAATGGCCAATGTGAATGAATTACTGCTGGAAGAATCAGATACTGAAAGCAATATGATATGGTTAGGTTTAGCGGAGTTAAAGAATATAACCAGTGGACATTATGCAGACATGAAAATGCATATTTCAGCTCTCCATATCTACATTCAAAACCTGTATTCTGAATGTCAAGATTTAGTCCAGGACATGGTTAGCGAAATTCATGAATTGAGGTTAAAAGCCAAGACATCAAATGAAAATTGTAAAAGTCTCCAATTCTTCAAAGATAAAGATCAACCAGCACACAAATATTGGAATGTTGAAAACCAAAATAGTATTTTGGATCAAATAAAGGCTAAAATATATGAAGCAAAAAACAGACTAAATATTCTTGAAGATTCTATTGATAGAAATATAGTTGGTTGTGGAGAACAGTATTTAGATCAATATCCAGTGAAAGAAGATGGCTGGAGTTCTGATTGTTCTACTTCAAGCTCTGACATTTCAACTGAGAGTGTTACTTCAAGAGGGAAACTTTTGGACTATATGAATGGTGACAAAGGAACCACAACTTGTCTGAGAAAGGAGTTGTATATGACGTATAATGTGATCCATAAACTTTGTCTGCAAATAGATGCGCTTCTAATGCATGATACAGGAGGTGATTCTTTGGCAGAAGAAATGGACCAGGGAAAAACACCCTTCAAACTGAGGATGGAAAAAGCTGAAGCTGGTTGCAATAACACCAGCCAGGTAATTTCTGTTGAGGAGACTAAAGAGGATGGGGGATTCTTGAACAGATTAGAAGAAGCTCAAGAAGCAATAAGAGAAGCTGAAATTATGTTAAATGCATTGTTGAGAGCCAATGAAAATGCAAAGCAACAAACCGGTATATTTAAGCAAGCTGGTGAGCAGTTACAGATAGAAAGAGAAAACTTGATTGACGAAGTTGGACAGCTCAAGTCTTCAATGCATCTGAAGGATGCTGAGAATAAATTACTTCATGAACAAGTTTGTTTTAATTTGGAAGAGGTAGCTAGCTCAGTGTCTTCTCTTGAAGGTTGTATTTCACAAACACAGAGGGATGTGGATGAGAAGTTTGGCATAATATCTTGTGATATCATATCCTTTAGAGACGAGATGTTTAAATCTGTTGGTAACTGGAAATCCCTATTGGAAGATGTTTTCTTGGAAGTAATGGGAAGAGAATTTATGTCATTTGTTGTCCATCAGTGTGTGAACGAAATTTGCTGGCAATTTGCACAGTTTAAGGCAGAACCTAACTTTTTACCACTTAAATGGCAAAGGTGTTTGGAATCAACCAATATTTCAGGATCTACATGCCTTACTGATAAGGAGGATATTATGTTAATCAGTAGGATTGACAGAGGAAGAACTGAGCTAATCACAGGCTTGGAAGAGGCAGATGGAGGTTTTTCCTATGATGACATGTTGTATGAGAATTTGGCACTTAAGAAGGAATTGAAGAGGAAGGATGTATTATTGGAAGGTTTGCTTTTTGATTTTAGGCTGCTGCAGGAATCAACCTCAAAAACAAAGGATATGAAAGATGAGACAGATTATTCTCTGAGTCAGCTGCAGCATGAATTGGAGATTAAGGCAAATCAGCTTGACAGTGTGCTAGTTCAGCAAAGAAAACTTGAGGGGCTTCTGACTGATACTGAAAAGGCTTTGTTCTCATCCAATTCCAAGCTTGATAAGGCAAAAGAAACAATGACTTCAATTTCAGAACATAATGCACAGTTGAAGAAGCAGGTAGAAGATCTTTATCTCAAGAAATCTGAGGCTGGAAAACAATTGGCAGAACAGCAGGATGTAATTAATAAACTAGAAAATGAAATACTCCATCTTACTTCACTGGAAAAGAAATCAGTTCTATCAGTTGAAGACATTGAGAATGAATTGAGCAGAGTCATCAGTGAGAGAGACCAACTCCATGAACAAGTCTGCTTTCTGACTGACAAGCTTGACATAGCCTATGCATTGGCTGATGAAAAGGAAGCTGTGGCCACTGAAGCTCGTCAGGAATCAGAGGCCAGTAAATTGTACGCAGAACAAAAGGAAGAGGAGGTGAAGATCTTGGAACACTCTGTTGAGGAGCTTGAGAGTACCATAAATATGTTGGAGACAAAGGTGCATGAGATGGATGAGGAGGTTGAGAAAAACCGCACATTAAGAGAATCATTAGAACTGGAGAAGCAAATCTTCAGACAGAGACTATTAGCTGTACAAAGTCTCTCTGAAGATGTGGATTGTGGAGATGAAATTGTTGAGCATGCTCAAGAGCAACCCAGGCAAGCGGGAATTATAGTTCTAGAACTGCTGGAGACACGGAGTAGAATAAAACTTCTTGAAGAGGAAAGGGTAGAACAAGACAAAGAGGTCAAACGACTCAAAGAATACATCTCCGAGCTTGTATTACATGCTGATGCCCAGGCAATGAAGTACCAACAAAAATACACAAATCTGGAAGTAATGGTCCGCGATGCAAGCAAAGATCATTCAAATCCAATGACTGCACCAACGTTAGATAAAGCCGAAAAAAATTCTGCGAGACCGAGGGGTTCAAGCTCACCATTCAGATGCATTTCAAACTTGGTGCATCAGATGAACTTGGAGAAAGAGCATGAGCTGTCTACAGCAAGGTTTCGTATAGAGGAGCTTGAGGGACTGGCAACTAGTCGGCAAAAAGAGATATGTATACTGAATGCTAGGCTGGCAGCAGCAGAAAGTATGACGCACGATGTTATTCGAGATTTACTTGGTGTTAAACTGGACTTGACTAAATATGCTAACTTTATAGAACAATACCAAGTTCAGCAAATGGTTATGGAGGCTCATCTACAGTCTCAACAATTCCGGGAAAAGGAACAAGAGGTTCACGACTTGAGGACACAAATTAATGATTTACAGGAGGAACGAGAATGTTACAAATCTGTACTAAGCAAGAAGGAAGCTGAAGCACTCGCGACACAAATAGCTTGCGAGAAACTACGAGAGCGGGATCACTTGCTTTCTGTACAAAATGGGATACTGAAGATGGAAAACAAAAATCTAAAGAGGAAGATCGTTGAGCTGGATGGAAAGGCGAACACACTTCATCAAACACGAATCAGCCAACAGGAAAATCGTCATGCATTTCTAACCAAGAATGATGAGTTAACTAAGAGGTTGGCGAACTCAAAAATGCTTCTCACCCGCAAACGAGATATCTCACGAGTGATTCATTTGGAGTATAAAGACCACTAG 5847 39.46 MHVATMALQELPVDVPHFDLEEDPSFWKDHNVQVMIRIRPLSTTERDSQGYGRCLRQETAKTLVWLGHPETRFTFDHIACETISQTGSGKTYTMMGGIYEVEGKLNEDCGLTLRIFEHLFTRIGMEEKSNQGVKLKYSCKCSFLEIYNEQITDLLEPSSTNLQLREDLKKGVYVENLTEHSVTTINDVVKLLLQGAANRKMAATYMNSESSRSHSVFTCIIESHWEKDSRTHFRFASSANETLSTLKFAQRAKQIQNNAKVNECASGDETALQRQILHLKGQLSFLLKHSNFPRSILNSVPRLEESGVSAPFEGYDPLGGRMQTENRKMKLMEASLIGALRREEVANATIKKLEFEIEHMKCLAFQQEEDGQRTKMLLKFREEKIRQLELFFGGMLSADQYLLEENKALAVEIKMLQAKINQNPELTRVSFENSKLTEQLQVYQNFYEQGEREALLTEVSELRNELLIALGKNSTISEQDKYQDETMSIKSYTQDDTLSYITGSDENFENTIGQGSDNELGAKPICSQKDLIDAKMLAQSMDSDNTMQAENHGCKQFKHCMVENFLNKSNVTKCQNEGNVMNQHEDVDNKTLQVKVENLTRELEEVRLSNIQYQENQNQQNQSEDVRQQVEMETANTILQLQEEVETLQLELNDSLHGLAQENTRLKDLLSAKNEEMRMLCIDWETAMVELTNFLLDGSKSIRDAHGQIESIANLFPKVNVGISEQVQQAIEVCIEKEETILLLHKSLEDARLMVKEMELKLDSLKEATLALNESQQMDDNISAAGAKPLSTQMTDENIMVEFLGKRLGVKNDQLSEAEKSADAAVIAVEWSSQPQELACCYNIEREMPISKLDVSSQRSSHIFDDVMANVNELLLEESDTESNMIWLGLAELKNITSGHYADMKMHISALHIYIQNLYSECQDLVQDMVSEIHELRLKAKTSNENCKSLQFFKDKDQPAHKYWNVENQNSILDQIKAKIYEAKNRLNILEDSIDRNIVGCGEQYLDQYPVKEDGWSSDCSTSSSDISTESVTSRGKLLDYMNGDKGTTTCLRKELYMTYNVIHKLCLQIDALLMHDTGGDSLAEEMDQGKTPFKLRMEKAEAGCNNTSQVISVEETKEDGGFLNRLEEAQEAIREAEIMLNALLRANENAKQQTGIFKQAGEQLQIERENLIDEVGQLKSSMHLKDAENKLLHEQVCFNLEEVASSVSSLEGCISQTQRDVDEKFGIISCDIISFRDEMFKSVGNWKSLLEDVFLEVMGREFMSFVVHQCVNEICWQFAQFKAEPNFLPLKWQRCLESTNISGSTCLTDKEDIMLISRIDRGRTELITGLEEADGGFSYDDMLYENLALKKELKRKDVLLEGLLFDFRLLQESTSKTKDMKDETDYSLSQLQHELEIKANQLDSVLVQQRKLEGLLTDTEKALFSSNSKLDKAKETMTSISEHNAQLKKQVEDLYLKKSEAGKQLAEQQDVINKLENEILHLTSLEKKSVLSVEDIENELSRVISERDQLHEQVCFLTDKLDIAYALADEKEAVATEARQESEASKLYAEQKEEEVKILEHSVEELESTINMLETKVHEMDEEVEKNRTLRESLELEKQIFRQRLLAVQSLSEDVDCGDEIVEHAQEQPRQAGIIVLELLETRSRIKLLEEERVEQDKEVKRLKEYISELVLHADAQAMKYQQKYTNLEVMVRDASKDHSNPMTAPTLDKAEKNSARPRGSSSPFRCISNLVHQMNLEKEHELSTARFRIEELEGLATSRQKEICILNARLAAAESMTHDVIRDLLGVKLDLTKYANFIEQYQVQQMVMEAHLQSQQFREKEQEVHDLRTQINDLQEERECYKSVLSKKEAEALATQIACEKLRERDHLLSVQNGILKMENKNLKRKIVELDGKANTLHQTRISQQENRHAFLTKNDELTKRLANSKMLLTRKRDISRVIHLEYKDH 1948
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4819282 4834154 - CePI673135_06g004270.1 Cec06g0427 205164

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0427 1948 Coils Coil 589 651 - -
Cec06g0427 1948 Gene3D Kinesin motor domain 237 291 IPR036961 -
Cec06g0427 1948 Coils Coil 1494 1514 - -
Cec06g0427 1948 Coils Coil 1431 1486 - -
Cec06g0427 1948 Coils Coil 1127 1154 - -
Cec06g0427 1948 MobiDBLite consensus disorder prediction 1697 1723 - -
Cec06g0427 1948 Coils Coil 656 676 - -
Cec06g0427 1948 PANTHER KINESIN-LIKE PROTEIN KIN-12D 517 1936 IPR044986 GO:0000910(PANTHER)
Cec06g0427 1948 Coils Coil 1819 1867 - -
Cec06g0427 1948 Coils Coil 1640 1667 - -
Cec06g0427 1948 PRINTS Kinesin heavy chain signature 75 96 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec06g0427 1948 PRINTS Kinesin heavy chain signature 204 221 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec06g0427 1948 Coils Coil 1882 1902 - -
Cec06g0427 1948 Coils Coil 973 993 - -
Cec06g0427 1948 Coils Coil 748 775 - -
Cec06g0427 1948 SMART kinesin_4 29 263 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec06g0427 1948 Pfam Kinesin motor domain 85 230 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec06g0427 1948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 286 IPR027417 -
Cec06g0427 1948 Coils Coil 1550 1598 - -
Cec06g0427 1948 Gene3D Kinesin motor domain 24 236 IPR036961 -
Cec06g0427 1948 ProSiteProfiles Kinesin motor domain profile. 85 248 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0427 K10400 - - csv:101204935 2862.4
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0427 Cec-Chr6:4819282 Cec09g1879 Cec-Chr9:35551200 9.60E-197 dispersed
Cec06g0427 Cec-Chr6:4819282 Cec03g0181 Cec-Chr3:1868136 4.10E-22 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g244 Blo01g00025 . . . . . . Bma05g00987 . . . . Car06g01297 . . Cpe08g00117 . . . . . . . . Cla06g00398 Cam06g0419 Cec06g0427 Cco06g0427 Clacu06g0406 Cmu06g0406 Cre06g1185 . Cone15ag0698 . . . . . . . Blo07g00066 Bda11g00439 . Bpe05g00795 Bpe13g00757 . Bma06g01400 . . . . . . . Cpe12g00346 . Bhi12g01988 . . . . . Lcy12g0897 . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012899 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 28