Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0432 ATGGTAGCTGAAGCTGAGATAAAATGCCCCAAAACCGTTCCTCTCGTGAAAATCAACTATCATCTTTGCGTAACCGATGATCGCGATCTTGAGATCCATTTGCCGCACCCTTCTTCCTCACCTGTTTTTCCCGAGGCAGTTAGTTGTTCAGATATTGTTGAAGACGTGCATATAAAATCAACTGCCATAGATTTTGTTCCAAACATTCGATCTGGTAGCTATGCAGACATTGGAGCTCGAGATTCTATGGATGATGAACATGTCTGCATTGATGATCTGTCTGCCCACCTCAGATCTATGTTCAAATGTTCTATGCCTAATGGTTTCTATGCTGTTTTTGATGGTCATGGAGGGCCTCATGCAGCTGCTTTTGTCAAGAGGAATGCCATGAGATTATTCTTTGAAGATGCCGATTGGTTAAAAATGCAGGACATTCATTCTATTTCTTTGAAAGATTTGGAGAACTCTCATCGCAAAGCATTTCAATTGGCAGATCTTGCCTTGGCTGATGAGCAAAGTGTTAGCAGCTCGTGCGGGACAACTGCGTTGACTGCGTTGGTCCTTGGGAGGCATTTGCTTGTTGCAAATGCCGGTGATTGCCGAGCAGTCCTATGTAGGAAAGGTGTAGCAGTCCCAATGTCTGAAGATCACAGGCCTTCTAATTTACTTGAGCTCAAGCGAGTGGAAGGGATGGGTGGTTTCGTAGATGATGGATATGTTAACGGCTATATTTCAGTAACCAGGACCTTGGGGGATTGGGATCTGAAATTGCTAAATGGCTCCTCATCACCTCTCATTGCTGAGCCACAAGTGGAGCATGTTATTTTAACAGGCGATGATGAGTTCTTGATTCTCGGCTGTGATGGGATTTGGGACGTAATGTCGAGCCAATATGCTGTCAGTCTCGTTCGACGTGGGTTGAGGAAGCACAATGACCCTCATCAAAGTTCCCGAGAATTAGTCCAGGAAGCTTTGCGCCTCAACACATCAGATAATCTTACTGCAATTGTAATCTGCTTTTCTTCTCCGAATTGCGTTCCCCAGCAGCAAATATGCAAGTCGTGTAATCTGACCGAAGAGGCTACAAATAGATTGAGGAACTTGTTAGAAGGTAACTGA 1119 44.5 MVAEAEIKCPKTVPLVKINYHLCVTDDRDLEIHLPHPSSSPVFPEAVSCSDIVEDVHIKSTAIDFVPNIRSGSYADIGARDSMDDEHVCIDDLSAHLRSMFKCSMPNGFYAVFDGHGGPHAAAFVKRNAMRLFFEDADWLKMQDIHSISLKDLENSHRKAFQLADLALADEQSVSSSCGTTALTALVLGRHLLVANAGDCRAVLCRKGVAVPMSEDHRPSNLLELKRVEGMGGFVDDGYVNGYISVTRTLGDWDLKLLNGSSSPLIAEPQVEHVILTGDDEFLILGCDGIWDVMSSQYAVSLVRRGLRKHNDPHQSSRELVQEALRLNTSDNLTAIVICFSSPNCVPQQQICKSCNLTEEATNRLRNLLEGN 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4890063 4895006 + CePI673135_06g004320.1 Cec06g0432 205169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0432 372 SMART PP2C_4 60 338 IPR001932 -
Cec06g0432 372 ProSitePatterns PPM-type phosphatase domain signature. 109 117 IPR000222 GO:0043169(InterPro)
Cec06g0432 372 PANTHER PROTEIN PHOSPHATASE 2C 60 340 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cec06g0432 372 CDD PP2Cc 69 340 IPR001932 -
Cec06g0432 372 Pfam Protein phosphatase 2C 78 332 IPR001932 -
Cec06g0432 372 ProSiteProfiles PPM-type phosphatase domain profile. 70 340 IPR001932 -
Cec06g0432 372 Gene3D - 53 344 IPR036457 -
Cec06g0432 372 FunFam Probable protein phosphatase 2C 22 53 343 - -
Cec06g0432 372 SMART PP2C_SIG_2 85 340 IPR001932 -
Cec06g0432 372 SUPERFAMILY PP2C-like 59 342 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0432 Cec-Chr6:4890063 Cec11g1929 Cec-Chr11:33458689 3.10E-80 dispersed
Cec05g0913 Cec-Chr5:7901160 Cec06g0432 Cec-Chr6:4890063 2.60E-27 transposed
Cec06g0432 Cec-Chr6:4890063 Cec09g0479 Cec-Chr9:4063707 1.50E-103 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29739 PF00481 PP2C 2.20E-64 CL0238 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0432 K14803 - csv:101207477 690.263