Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0447 | ATGGAGGAGGAGAAGAAGAAGGAAGAAGTTTTGAGAAATAGAGATCAGATGGGAAATTCTGGATTGTTATTCTCCGATGCGATTATTCCCAATAATAATAGTATGTTCGATTTTCCATTCATCGACTCCACTGATTCTTCTTCTTCTTCTTTTAAGCCTTCCACTTTCTTGGATTTGTTAGCCACCCAAGATTACACCCCTTCTTTATTCGATCTTTTCTCTCCTCCGCCGCTGCCTCCTCCTCCTCCTCCTCCACCCCCGCCCTCCTCCGCCGTGCCTGAGTCATCCGAAGTCCTCAATACTCCTCCCACTCCTAACTCCTCCTCCGTCTCTTGCTCCTCCACCGAACGCCTTCTCGACGCCGATGATGCCGATCGGGATAAATCGCCTTTCAACAAACAGTTGAAAGCAAAAAAGAAAAATCAAAAAAGGGGAAGAGAACCGAGATTTGCGTTCATGACAAAGAGCGAAGTGGATCATCTAGACGACGGTTACAGATGGCGAAAATACGGTCAAAAAGCCGTTAAAAACAGCCCTTATCCAAGAAGTTATTACCGTTGCACCACCGCCGGCTGCGGCGTCAAAAAACGAGTCGAACGATCCTCGGACGACCCTTCCGTCGTCGTCACCACTTACGAAGGCCAACACACTCATCAAAGTCCAATCATGCCACGTGGAGCTATATCAGCCGGCGCCGCCGCCTTCGCCTCACCCCAACCGCCGCTTGTTTTCCCACAGCCGCAATTATTCCGAAACCACTACCAGCAATATACGTACGCTCCGGCGCCGCCTGTGGACGTTGTCACGTGCGGCCGAGGGTTTGATCCCGTGTTTCATAGTTTTGGTGGTGAAGAACGTCGTCGTATTGATGGAATAACTTGTTCTAATTCTGATTCTTTCCAAGACCATGGCCTTCTACAAGATATGATCGTACCCTCCTCCAACTCCTTACAAATCCCAGAAGAAGATAAACAAAATTAA | 981 | 48.52 | MEEEKKKEEVLRNRDQMGNSGLLFSDAIIPNNNSMFDFPFIDSTDSSSSSFKPSTFLDLLATQDYTPSLFDLFSPPPLPPPPPPPPPPSSAVPESSEVLNTPPTPNSSSVSCSSTERLLDADDADRDKSPFNKQLKAKKKNQKRGREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSVVVTTYEGQHTHQSPIMPRGAISAGAAAFASPQPPLVFPQPQLFRNHYQQYTYAPAPPVDVVTCGRGFDPVFHSFGGEERRRIDGITCSNSDSFQDHGLLQDMIVPSSNSLQIPEEDKQN | 326 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5039065 | 5040466 | - | CePI673135_06g004470.1 | Cec06g0447 | 205184 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0447 | 326 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Cec06g0447 | 326 | ProSiteProfiles | WRKY domain profile. | 156 | 221 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec06g0447 | 326 | SMART | WRKY_cls | 161 | 220 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec06g0447 | 326 | MobiDBLite | consensus disorder prediction | 68 | 150 | - | - | |
Cec06g0447 | 326 | FunFam | WRKY transcription factor 57 | 147 | 221 | - | - | |
Cec06g0447 | 326 | Gene3D | WRKY domain | 145 | 222 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec06g0447 | 326 | MobiDBLite | consensus disorder prediction | 118 | 134 | - | - | |
Cec06g0447 | 326 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 98 | 227 | IPR044810 | GO:0003700(InterPro) | |
Cec06g0447 | 326 | MobiDBLite | consensus disorder prediction | 93 | 116 | - | - | |
Cec06g0447 | 326 | MobiDBLite | consensus disorder prediction | 72 | 92 | - | - | |
Cec06g0447 | 326 | SUPERFAMILY | WRKY DNA-binding domain | 153 | 221 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec06g0447 | 326 | Pfam | WRKY DNA -binding domain | 162 | 219 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1926 | Cec-Chr2:37122354 | Cec06g0447 | Cec-Chr6:5039065 | 8.40E-39 | dispersed | |
Cec06g0447 | Cec-Chr6:5039065 | Cec09g2349 | Cec-Chr9:40316282 | 3.50E-35 | dispersed | |
Cec05g1527 | Cec-Chr5:19675822 | Cec06g0447 | Cec-Chr6:5039065 | 1.50E-29 | transposed | |
Cec08g1058 | Cec-Chr8:22466291 | Cec06g0447 | Cec-Chr6:5039065 | 1.60E-39 | transposed | |
Cec11g0743 | Cec-Chr11:8415714 | Cec06g0447 | Cec-Chr6:5039065 | 1.00E-21 | transposed | |
Cec10g1167 | Cec-Chr10:25499238 | Cec06g0447 | Cec-Chr6:5039065 | 2.30E-44 | wgd | |
Cec05g0789 | Cec-Chr5:6576135 | Cec06g0447 | Cec-Chr6:5039065 | 9.20E-42 | wgd | |
Cec06g0447 | Cec-Chr6:5039065 | Cec09g0495 | Cec-Chr9:4236269 | 2.90E-37 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29740 | PF03106 | WRKY | 6.30E-27 | CL0274 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0447 | - | - | - | 0.0 |