Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0447 ATGGAGGAGGAGAAGAAGAAGGAAGAAGTTTTGAGAAATAGAGATCAGATGGGAAATTCTGGATTGTTATTCTCCGATGCGATTATTCCCAATAATAATAGTATGTTCGATTTTCCATTCATCGACTCCACTGATTCTTCTTCTTCTTCTTTTAAGCCTTCCACTTTCTTGGATTTGTTAGCCACCCAAGATTACACCCCTTCTTTATTCGATCTTTTCTCTCCTCCGCCGCTGCCTCCTCCTCCTCCTCCTCCACCCCCGCCCTCCTCCGCCGTGCCTGAGTCATCCGAAGTCCTCAATACTCCTCCCACTCCTAACTCCTCCTCCGTCTCTTGCTCCTCCACCGAACGCCTTCTCGACGCCGATGATGCCGATCGGGATAAATCGCCTTTCAACAAACAGTTGAAAGCAAAAAAGAAAAATCAAAAAAGGGGAAGAGAACCGAGATTTGCGTTCATGACAAAGAGCGAAGTGGATCATCTAGACGACGGTTACAGATGGCGAAAATACGGTCAAAAAGCCGTTAAAAACAGCCCTTATCCAAGAAGTTATTACCGTTGCACCACCGCCGGCTGCGGCGTCAAAAAACGAGTCGAACGATCCTCGGACGACCCTTCCGTCGTCGTCACCACTTACGAAGGCCAACACACTCATCAAAGTCCAATCATGCCACGTGGAGCTATATCAGCCGGCGCCGCCGCCTTCGCCTCACCCCAACCGCCGCTTGTTTTCCCACAGCCGCAATTATTCCGAAACCACTACCAGCAATATACGTACGCTCCGGCGCCGCCTGTGGACGTTGTCACGTGCGGCCGAGGGTTTGATCCCGTGTTTCATAGTTTTGGTGGTGAAGAACGTCGTCGTATTGATGGAATAACTTGTTCTAATTCTGATTCTTTCCAAGACCATGGCCTTCTACAAGATATGATCGTACCCTCCTCCAACTCCTTACAAATCCCAGAAGAAGATAAACAAAATTAA 981 48.52 MEEEKKKEEVLRNRDQMGNSGLLFSDAIIPNNNSMFDFPFIDSTDSSSSSFKPSTFLDLLATQDYTPSLFDLFSPPPLPPPPPPPPPPSSAVPESSEVLNTPPTPNSSSVSCSSTERLLDADDADRDKSPFNKQLKAKKKNQKRGREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSVVVTTYEGQHTHQSPIMPRGAISAGAAAFASPQPPLVFPQPQLFRNHYQQYTYAPAPPVDVVTCGRGFDPVFHSFGGEERRRIDGITCSNSDSFQDHGLLQDMIVPSSNSLQIPEEDKQN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5039065 5040466 - CePI673135_06g004470.1 Cec06g0447 205184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0447 326 MobiDBLite consensus disorder prediction 1 26 - -
Cec06g0447 326 ProSiteProfiles WRKY domain profile. 156 221 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec06g0447 326 SMART WRKY_cls 161 220 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec06g0447 326 MobiDBLite consensus disorder prediction 68 150 - -
Cec06g0447 326 FunFam WRKY transcription factor 57 147 221 - -
Cec06g0447 326 Gene3D WRKY domain 145 222 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec06g0447 326 MobiDBLite consensus disorder prediction 118 134 - -
Cec06g0447 326 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 98 227 IPR044810 GO:0003700(InterPro)
Cec06g0447 326 MobiDBLite consensus disorder prediction 93 116 - -
Cec06g0447 326 MobiDBLite consensus disorder prediction 72 92 - -
Cec06g0447 326 SUPERFAMILY WRKY DNA-binding domain 153 221 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec06g0447 326 Pfam WRKY DNA -binding domain 162 219 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1926 Cec-Chr2:37122354 Cec06g0447 Cec-Chr6:5039065 8.40E-39 dispersed
Cec06g0447 Cec-Chr6:5039065 Cec09g2349 Cec-Chr9:40316282 3.50E-35 dispersed
Cec05g1527 Cec-Chr5:19675822 Cec06g0447 Cec-Chr6:5039065 1.50E-29 transposed
Cec08g1058 Cec-Chr8:22466291 Cec06g0447 Cec-Chr6:5039065 1.60E-39 transposed
Cec11g0743 Cec-Chr11:8415714 Cec06g0447 Cec-Chr6:5039065 1.00E-21 transposed
Cec10g1167 Cec-Chr10:25499238 Cec06g0447 Cec-Chr6:5039065 2.30E-44 wgd
Cec05g0789 Cec-Chr5:6576135 Cec06g0447 Cec-Chr6:5039065 9.20E-42 wgd
Cec06g0447 Cec-Chr6:5039065 Cec09g0495 Cec-Chr9:4236269 2.90E-37 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29740 PF03106 WRKY 6.30E-27 CL0274 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0447 - - - 0.0