Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0456 | ATGGGAACTCCACCAGCAGAGGAGCTTCTGAGGAAGATCCAAGAGCTGGAGGAGGGTCAAGCGCATCTCAAGAAAGAGATGTCCAAACTTCTTCTCTCTGGAACTGCCGCCGATTCCAACTCCGACCACCAAATCCACCACCACCATCATCACCATCAACGTTCTCAATCCATTTCACCTCAGCGTTCTAGATTTGCTACGGCTCGGAGAAGAGGTGGCGCTGCTGGAGGTTTAGACGCCGCCGCCGCCGCCTGGAAAAGGGGCTCTTCATCATTTCGACATTCTTCTCCACTTCAGAGAGAAAGTAGGACTCGTGACCCTTTGAATGCCGCCGCCGCCGGAGGTGGCGGCGGCGGCGGCGGCGGCTCTGGCCCCGCCGCTGTGAATTTCACCAACAAACAGTATCTGAATATCTTGCAGTCAATGGGACAGCCTGTTTATATTTTTGACCTTAATTATCATATAATTTACTGGAATCGAGCTGCTGAAATTGTATATGGGTATTCTGCGGCGGAGGCTCTTGGCCAGGACGCCATTGAGCTTCTAGTAGATCCTGAGGATTTCGCGATTGCAAACCATGTAATTCTTCGTGTCATGGCGGGTGAGAATTGGACTGGTCACTTACCTGTAAAGAACAAGATGGGGCAAAAATTTATAGTTGTTGCCGCCAACACTCCATTCTACGACGATGGTGCATTGGTTGGGATTATCTGTGTATCGAGCGATTTGCGGCCATTTCAAGATTTGAAGATTCCTCTATCAGTAGGTTCTAAACAGCAGGATGCAGATTCGAGCATGGTAATCCCAGTTTCAGCTAAGCTTGGTCTTGATCCTCAGCAGCCTCTTCAAGTGGCAATTGCTTCAAAGTTATCCAACTTGGCATCAAAGGTAAGCAACAAAGTCAAGTTGAAAATTCGAACTGGAGAAAACAGTTCGGATCGTGAAGGTGGAAGTGGAGATAGTTATCACTCTGATCTTGGCTATCCAGAGGCAGTTCTTTGTGACCATCGGGACGATGCAAATTCGAGCGGAGCTAGCACACCTCGAGGAGATTCCACGGCTCATGGTGCATTCTCTCAGGTTGAAGAGAAGTTATCTGGCAAACTGGTCAGGGATTCTGGTGATGAGGTTAAAGGAAAACCTACCATCCAGAAGATCTTATCCTCAAAGGCAGAAGAATGGATTGCCAAGAAAGGCTTATCCTGGCCTTGGAAAGGGACCGAGCAGGAAGGAGGATCTGAAACAAAGGCAGCCCGTTTTGTTTGGCCTTGGTTACAAATTGATCAAGAAGCCGAACCAGCTAATCAAAAGAGTTCCTCTATTTCTGGGAAACCAGAAATGCAGCAAAACGACAGTCATCGAGCAGTCAATAACGAGGCCTCAGGATCGTGGTCGTCGTTCAATGTTAACAGCACTAGCAGTGTCAGTAGCTGTGGAAGTACCAGTAGTAGTGCTGTCAACAAAGTTGACACAGATATAGACTGTTTGGATCATGAAATCTTGTGGGAAGACCTTACCATTGGGGAGCAAATAGGGCAAGGTTCTTGTGGAACTGTCTATCATGCACTGTGGTATGGATCAGACGTTGCCGTCAAAGTGTTCTCCAAACAAGAGTATTCAGATGATGTGATTCTCTCCTTCAAACAGGAGGTATCCCTGATGAAAAAGCTTAGACACCCCAATATTCTTCTCTTTATGGGAGTTGTGACTTCACCTCAGCGTCTCTGCATTGTCACAGAATTCCTTCCACGTGGAAGTTTGTTTCGTTTACTACAGAGGAACACAGGCAAATTAGATTGGAGACGCCGTGTTCATATGGCTTTGGACATTGCTCGAGGCATGAACTATCTTCACCATTGCAATCCACCTATTATTCACCGAGATTTGAAATCATCGAACCTCTTAATCGATAAAAACTGGACTGTGAAGGTTGGAGATTTTGGTCTATCTCGGCTTAAGCATGAGACTTATCTAACAACTAAGACAGGAAAGGGCACGCCTCAATGGATGGCACCTGAAGTTCTTCGTAATGAGCCCTCGGATGAGAAGTCCGACATATACAGTTTTGGAGTCATATTGTGGGAGCTTGCAACTGAGAAGATCCCTTGGGAAAATCTCAATTCGATGCAGGTAATTGGTGCTGTTGGGTTCATGAACCAACGTCTTGAAATCCCCAAGGATGTGGATCCACAATGGGCTTCTATTATTGAGAGCTGCTGGCAAAGCGAACCTTCAAACCGGCCATCATTCCAAGTTCTGATAGAAAAGCTTAGAGAAATGCAGAGGAAGTTTGCTATGCAATTACAGGCAGCTCGTTCTGGTGGAGAGAATAATAATAATAATAATAATAATAATAACAACAACATCCCTCAAAAGGAAACATAA | 2385 | 46.08 | MGTPPAEELLRKIQELEEGQAHLKKEMSKLLLSGTAADSNSDHQIHHHHHHHQRSQSISPQRSRFATARRRGGAAGGLDAAAAAWKRGSSSFRHSSPLQRESRTRDPLNAAAAGGGGGGGGGSGPAAVNFTNKQYLNILQSMGQPVYIFDLNYHIIYWNRAAEIVYGYSAAEALGQDAIELLVDPEDFAIANHVILRVMAGENWTGHLPVKNKMGQKFIVVAANTPFYDDGALVGIICVSSDLRPFQDLKIPLSVGSKQQDADSSMVIPVSAKLGLDPQQPLQVAIASKLSNLASKVSNKVKLKIRTGENSSDREGGSGDSYHSDLGYPEAVLCDHRDDANSSGASTPRGDSTAHGAFSQVEEKLSGKLVRDSGDEVKGKPTIQKILSSKAEEWIAKKGLSWPWKGTEQEGGSETKAARFVWPWLQIDQEAEPANQKSSSISGKPEMQQNDSHRAVNNEASGSWSSFNVNSTSSVSSCGSTSSSAVNKVDTDIDCLDHEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFKQEVSLMKKLRHPNILLFMGVVTSPQRLCIVTEFLPRGSLFRLLQRNTGKLDWRRRVHMALDIARGMNYLHHCNPPIIHRDLKSSNLLIDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVILWELATEKIPWENLNSMQVIGAVGFMNQRLEIPKDVDPQWASIIESCWQSEPSNRPSFQVLIEKLREMQRKFAMQLQAARSGGENNNNNNNNNNNNIPQKET | 794 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5147762 | 5152366 | - | CePI673135_06g004560.1 | Cec06g0456 | 205193 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0456 | 794 | MobiDBLite | consensus disorder prediction | 431 | 461 | - | - | |
Cec06g0456 | 794 | CDD | PAS | 142 | 243 | IPR000014 | - | |
Cec06g0456 | 794 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 71 | 760 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cec06g0456 | 794 | Pfam | Protein tyrosine and serine/threonine kinase | 505 | 757 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec06g0456 | 794 | Pfam | PAS fold | 134 | 242 | IPR013767 | GO:0006355(InterPro) | |
Cec06g0456 | 794 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 135 | 242 | IPR035965 | - | |
Cec06g0456 | 794 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 624 | 636 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec06g0456 | 794 | FunFam | PAS domain-containing protein tyrosine kinase family protein | 583 | 774 | - | - | |
Cec06g0456 | 794 | MobiDBLite | consensus disorder prediction | 88 | 124 | - | - | |
Cec06g0456 | 794 | SMART | serkin_6 | 505 | 765 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0456 | 794 | MobiDBLite | consensus disorder prediction | 35 | 72 | - | - | |
Cec06g0456 | 794 | NCBIfam | PAS domain S-box protein | 133 | 243 | IPR000014 | - | |
Cec06g0456 | 794 | FunFam | PAS domain-containing protein tyrosine kinase | 498 | 582 | - | - | |
Cec06g0456 | 794 | MobiDBLite | consensus disorder prediction | 365 | 379 | - | - | |
Cec06g0456 | 794 | SUPERFAMILY | Protein kinase-like (PK-like) | 488 | 755 | IPR011009 | - | |
Cec06g0456 | 794 | SMART | pas_2 | 133 | 200 | IPR000014 | - | |
Cec06g0456 | 794 | Gene3D | PAS domain | 143 | 245 | - | - | |
Cec06g0456 | 794 | Coils | Coil | 6 | 26 | - | - | |
Cec06g0456 | 794 | MobiDBLite | consensus disorder prediction | 340 | 354 | - | - | |
Cec06g0456 | 794 | Gene3D | Transferase(Phosphotransferase) domain 1 | 583 | 794 | - | - | |
Cec06g0456 | 794 | ProSiteProfiles | PAS repeat profile. | 131 | 202 | IPR000014 | - | |
Cec06g0456 | 794 | MobiDBLite | consensus disorder prediction | 769 | 794 | - | - | |
Cec06g0456 | 794 | PRINTS | Tyrosine kinase catalytic domain signature | 728 | 750 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec06g0456 | 794 | PRINTS | Tyrosine kinase catalytic domain signature | 579 | 592 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec06g0456 | 794 | PRINTS | Tyrosine kinase catalytic domain signature | 618 | 636 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec06g0456 | 794 | PRINTS | Tyrosine kinase catalytic domain signature | 665 | 675 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec06g0456 | 794 | PRINTS | Tyrosine kinase catalytic domain signature | 684 | 706 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec06g0456 | 794 | MobiDBLite | consensus disorder prediction | 771 | 794 | - | - | |
Cec06g0456 | 794 | Gene3D | Phosphorylase Kinase; domain 1 | 498 | 582 | - | - | |
Cec06g0456 | 794 | ProSiteProfiles | Protein kinase domain profile. | 505 | 765 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0456 | 794 | MobiDBLite | consensus disorder prediction | 336 | 380 | - | - | |
Cec06g0456 | 794 | CDD | STKc_MAP3K-like | 511 | 757 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec06g0456 | Cec-Chr6:5147762 | Cec10g1954 | Cec-Chr10:34337981 | 1.10E-90 | dispersed | |
Cec06g0456 | Cec-Chr6:5147762 | Cec01g1612 | Cec-Chr1:30762998 | 9.00E-93 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72068 | PF07714 | PK_Tyr_Ser-Thr | 3.70E-69 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0456 | - | - | - | 0.0 |