Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0491 ATGGTGCTTTTCCCGGAAGTTATTGAAGAAATGGTAAGAAATATGTCGATAAAGAAAAAGAATAATGAAGATGATGGCGGTAAAGAAGGGGGTCGAGAAGTAAGGAGTAAAGAGGGAAAAAGAAACAAATCCATGATTTGTTTATCTGGAAGTGTTAAAACGACCAAGTTCGATGATATGGCTTCTGTTTGCTCCAAGAGAGGAAATAAAGGAATTAATCAGGATTCTCTTGTTGTTTGGGAGGATTATGGCAACCGAGGAGATGTAGTTTTATGTGGAATGTTTGATGGGCATGGGCCTTGGGGCCACATGATTAGCAAACAAGTCAGAAAGTCACTACCTTCTCAATTACTTACCAATTGGCAACAAAACCTTTCCATGCAAACCGACCAAAACCATCTCTTTCCTTTCAACCTATGGAAGCAATCTTGCTTAAAAACTTATGCCGCCATTGATGAAGAGCTCAAGCAACACCCTCGCATTGATTCTTTTTACAGTGGCACCACCGCTCTAACCCTCGTTAAACAGGGGCGACACCTTGTTGTTGCAAATGCTGGCGATTCACGAGCTGTGTTGGCGGTAACTTCTGGTGATGGCTGCTTGAAACCAATTCAACTCTCCGTTGATTTCCGACCTAATTTGCCTGAGGAAGCTGAAAGAATAAAACAATCGAAAGGGAGAGTGGTATGTTTAAAAGATGAACCTGGGGTTTATAGGGTGTGGACTCCCGATTCAGGGACTCCAGGATTGGCAATTTCTAGAGCTTTTGGCGATTATTGCACCAAACAGTACGGTCTCATTTCTGTGCCTGATGTAAGCCATCGGATCATCACTACTTCAGATCAGTTTGTCATTGTCGCCACCGATGGGGTATGGGACGTCATGTCGAATCAAGAAGCGGTTCACATAGTTTCTTCAACACCAAATAGGGAAATGTCGGCCAAAAGGCTAGTGGATTGTGCTGCACGTGCATGGAAATCAAAGAAACGAGGGTTTGCAAGGGACGACATGTCGGCCATTTGCCTCTTTTTACGTGCTTCACCCGTAGAAAATGATTTTGAGTCATCATTTACGCCATTGTTTGAGCTTCTGATTCGCGCGGGCAGTGCCATATCGTTTCGCTCTCAAATTCGCTCATCTCTAAGCCATTCCCCTTCGCATCGCATCCTAATCCGAAGGAACTTCGAGATGAGTCCGATTTTGAATGAAGCAGAACCGAAGGAACTGCGAGATGAGTCTGATATTGAAGCAATCTTCTCCGACGGCGATTATATTTCCGTTTTTGGCGTTGAATCTCTCCTCTCAGAACCAAAGGAGCTGCGAGATGAGTCCGATTTTGAAGCAATCTTCTCCGACGGCGATTATATTTCCGTTTGTGGCTTTGGATCTCTCCTCTCTGAGAGGAGTGCGCGAAGTACTTTTCCTGATTTGATCAACTTTAGAGTTGCGAGATTGAACAATTTCAGACGCGTTTTCGGAATTATAGCTCCTATATTCTTTGAGCACGGCATTGCTAAATCTGAAACCAAGGAGATTTCAAGCTTATTTGCGGAGCCTTGTGAAGGAGAAACTATCATCATTACGGTTTTCGAGATTAAGAAGTCTGATATTCCAGCGTTCATACAGAGAGAGTTTGCGTTTCGATTTCTAGCTGTTCTTCCTGAAACATTAGACGGAAAGCTATATGATAAACCAGCGGTGCTTTGTTCTCGATCGACTGACGAGGAGTTTTTCCAAGTGAAATGCAAAGGAAACAAGGACATTTTTCTTCAGCATTATGGTCGTCATAATATTGATAAGATCTGGAGAGATGATATCTTACCTTGTCGCGTCTATCTTCAACACTGTATTTTAGCAGCAAAAAACCTAGGTGACATTGCTTATAACAACTTTTTGGATCACACTTTTCTGGGAGATCGTTGTACAACCATCCATGAATATTTGGTCGCTAATGGTTCATCCATTATAGAAGAGGAGCCTACAGAATCTCTCAAATTTCGATATGGCGGTTGA 2013 42.82 MVLFPEVIEEMVRNMSIKKKNNEDDGGKEGGREVRSKEGKRNKSMICLSGSVKTTKFDDMASVCSKRGNKGINQDSLVVWEDYGNRGDVVLCGMFDGHGPWGHMISKQVRKSLPSQLLTNWQQNLSMQTDQNHLFPFNLWKQSCLKTYAAIDEELKQHPRIDSFYSGTTALTLVKQGRHLVVANAGDSRAVLAVTSGDGCLKPIQLSVDFRPNLPEEAERIKQSKGRVVCLKDEPGVYRVWTPDSGTPGLAISRAFGDYCTKQYGLISVPDVSHRIITTSDQFVIVATDGVWDVMSNQEAVHIVSSTPNREMSAKRLVDCAARAWKSKKRGFARDDMSAICLFLRASPVENDFESSFTPLFELLIRAGSAISFRSQIRSSLSHSPSHRILIRRNFEMSPILNEAEPKELRDESDIEAIFSDGDYISVFGVESLLSEPKELRDESDFEAIFSDGDYISVCGFGSLLSERSARSTFPDLINFRVARLNNFRRVFGIIAPIFFEHGIAKSETKEISSLFAEPCEGETIIITVFEIKKSDIPAFIQREFAFRFLAVLPETLDGKLYDKPAVLCSRSTDEEFFQVKCKGNKDIFLQHYGRHNIDKIWRDDILPCRVYLQHCILAAKNLGDIAYNNFLDHTFLGDRCTTIHEYLVANGSSIIEEEPTESLKFRYGG 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5509002 5519230 - CePI673135_06g004910.1 Cec06g0491 205228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0491 670 MobiDBLite consensus disorder prediction 18 41 - -
Cec06g0491 670 CDD PP2Cc 60 344 IPR001932 -
Cec06g0491 670 ProSiteProfiles PPM-type phosphatase domain profile. 60 344 IPR001932 -
Cec06g0491 670 SMART PP2C_4 50 342 IPR001932 -
Cec06g0491 670 Pfam Protein phosphatase 2C 86 322 IPR001932 -
Cec06g0491 670 PANTHER OS05G0358400 PROTEIN 438 670 - -
Cec06g0491 670 SUPERFAMILY PP2C-like 60 345 IPR036457 -
Cec06g0491 670 Gene3D - 50 346 IPR036457 -
Cec06g0491 670 Gene3D - 451 635 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1820 Cec-Chr2:36009078 Cec06g0491 Cec-Chr6:5509002 3.60E-79 dispersed
Cec03g1819 Cec-Chr3:36421521 Cec06g0491 Cec-Chr6:5509002 1.00E-99 dispersed
Cec06g0491 Cec-Chr6:5509002 Cec10g0367 Cec-Chr10:4408085 2.50E-88 dispersed
Cec06g0490 Cec-Chr6:5501522 Cec06g0491 Cec-Chr6:5509002 8.10E-114 tandem
Cec02g1605 Cec-Chr2:33619241 Cec06g0491 Cec-Chr6:5509002 9.80E-119 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0491 - - - 0.0