Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0492 ATGGTCGATTGCTGCTGTCGGCTACCTATGCCTGCCCGCTTCTTGCTCGACCATCTCTCTACGCTCTTTCGAATTTCTATTTTCATCCCATTAGAATCTAACAGAAATGTTCGAAGAATCAGCTGGAGGAAAAAAAATAAAAAGGAAAAAAAGAGGCCTTCAACGAGAAGAAATTTCGATCTCTCGATTTCTCTGTTTTCTGTGTTCTGTGGATTAAGACTCTTCAATTGTGGCCGAATTCGATCAAACCAAGCCGCTGTGGCGTTGGACAGATTAGGAATGGGATCGGAGCAGTTGATGGCCGGAGGTGGGCCTCGATACGTTCAAATGCAATCGGAGCCGCCTTCGGCTTCGATGTCGTCGTTTTTTTCATTTCATCACGACGCTCCTGAGCCGACAAGGATTTTTGATGAGTTGCCGCAGGCCACAATCATTTCCGTCTCTCGACCTGATGCCGGCGATATCAGTCCCATGCTTCTTTCTTACACAATCGAGTGCCAGTACAAGCAGTTTAAATGGCGCATGCTGAAGAAAGCTTCCCATGTATTTTATTTGCATTTCGCATTAAAGAAACGGGCATTCATTGAGGAAATTCACGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGATCAAACAACAGTGCCCCAAGATGAGGATGGACCCGATGATGAGACCGATCCTCTGCATCATGATGAAAGTTCTAAAAATAGGGATGTTCCATCCAGTGCAGCCCTGCCAATTATTCGGCCTGCCTTAGGAAGGCAGCACTCTATGTCTGATAGAGCTAAGAATGCAATGCAAGGGTATCTGAATCACTTTTTGAGTAATATGGATATTGTCAACTCTCGAGAGGTTTGCAGGTTTTTGGAGGTCTCTAAGTTATCATTTTCACCAGAATACGGCCCAAAATTGAAAGAGGATTATGTCATGGTGAAGCACCTACCTAAAATTCCAAAGGAAGATGACTCTAGGAAATGTTGTCTATGCCCTTGGTTTGGTTGTTGTAATGACAATTGGCAAAAGGTGTGGGCTGTATTAAAACCTGGGTTTTTGGCCTTGTTGGGAGATCCTTTTGATACTCAACCTATGGATATTATAGTTTTTGATGTGCTACCTACTTCAGATGGCAATGGAGATGGACGAGTATCCCTGGCTAAGGAAATTAAAGAGCGAAATCCATTACGACATTCATTTAAGGTGACATGTGGAAATAGGAATATTAGGATTAGAGCAAAGAATGGATCCAAGGTTAAAGATTGGGTTGCTGCAATTAATGATGCTGGACTGAGGCCTCCTGAGGGCTGGTGTCATCCTCACCGTTTTGGCTCTTATGCTCCACCAAGAGGTTTGACTGAAGATGGTAGTAAGGCTCAGTGGTTCATTGATGGCCTAGCAGCTTTTGAAGCTATTGCCTTTTCCATTGAACGTGCAAAATCAGAGATTTTCATTTGTGGTTGGTGGCTTTGCCCAGAATTGTATCTGAGGCGTCCTTTTGTTTCAAATGCTTCATCTAGGCTTGATGCTTTACTTGAAGCAAAAGCTAAGGAAGGGGTTCAGATATACATTCTTCTCTACAAAGAGGTTGCCCTTGCTTTAAAAATTAACAGTGTTTATAGCAAGAGAAAACTTCTTGGCATCCACGAGAATGTGAGAGTATTGCGCTACCCCGACCACTTCTCCAGCGGTGTGTACTTATGGTCCCACCATGAAAAACTTGTCATTGTTGATTATCATATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGATACACCCGAACATAAAGTTGGTGATTGTCCTCCTTCAGTATGGCCTGGGAAGGACTACTATAATCCAAGGGAATCTGAGCCAAATTCATGGGAAGATACCATGAGAGATGAGTTGGATCGCAAGAAATATCCTCGCATGCCTTGGCATGATGTCCACTGTGCACTCTGGGGACCATCTTGTAGAGACATAGCCAGGCATTTTGTCCAACGCTGGAATTATGCTAAGAGAAATAAAGCCCCAAACGAGCAGGCAATTCCATTACTTATGCCTCAGCATCATATGGTCATTCCTCATTACTTGTGGAATAGCCGAGAGTTGGAGGTTGAAAAGAAGAGTTTTGACAATTCTAGAGGAACAACAGTGCAGGATTCATTTTCTCGAGGATCATCTTTCCACGATATTCCATTGCTTTTGCCTCAAGAGGCTGATGGACAGGATGCTGAAAATGAAGGTCCAAAATTAAATGGACTGGAGCCCATTGTGAATCCCCTTGATCAGCCAAGTAAGGTCAGCAGCGGTCTCTCTTTTTCTTTCAGGAAGATCAAAGTTGAACCCATAGGACCCGATATGCCTCTGAAAGGCTTTGTTGATGATCTTGACCATTTGGATTCCCATGGAAAGTTGTCTGGAGATGGGAAAACACATCATCGTGTCAAAAGTTCGGATTTTGAGTGGTGGGAAACACAAGACAGAGGACATCATGGTGGCTTCACAGATGAATCTGGACAAGTTGGTCCATGTGCTTCATGTCGTTGCCAGGTCATCAGAAGCGTCAGTCAGTGGTCTGCTGGGACAAGCCGAACTGAAGAAAGCATTCACACTGCATACTGCTCTCTTATTGAGAAAGCAGAACATTTTATCTACATCGAGAATCAATTTTTTATATCAGGCCTCTCGGGAGACGATTCAATACGGAACCGTGTATTAGAAGCATTATACCGCCGCATAATGAGAGCCTACCGTGAAAAGAAGATTTTTAGGGTCATTATTGTCATACCACTCTTACCTGGATTTCAGGGGGGTCTGGACGATAGTGGTGCAGCATCGGTTAGAGCTATAATGCATTGGCAGTATCGAACTATATGTCGAGGACAGAATTCAATATTGCATAATCTTTATGATCTCCTTGGTTCAAAAGTTCATGATTATATATCATTTTACGGCCTCAGAGCTTATGGTAAACTCTTTGATGGTGGTCCTGTGGCTACAAGCCAGGTGTACGTGCATAGTAAAATTATGATTATTGATGATTGTATTGCTTTGATTGGATCGGCTAATATCAACGACAGAAGTTTACTTGGTAATAGGGATTCCGAGATTGCTATTGTTATTGAAGATAACGAACTCATCAATTCATATATGGGAGGACAACCATGGAAAGCAGGAAAGTTTTGCTGGAGTCTACGTCTCTCTCTTTGGTCTGAACATCTCGGTCTTCGTCCCGGACAGATCAATCAAATAGTTGACCCAGTTGCTGATTCAACCTACAAGGATACGTGGATGGCAACTGCCAAGACAAACACAACAATATACCAAGATGTTTTTTCTTGCTTACCTAACGACCTCATAAATTCAAGAGCTGGACTGAGACAGAGCGTTACGATCTGGAAAGAGCGACTGGGACACACGACAATAGATTTAGGAATTGCCCCTGAGAAGCTTGAGTTTTATAAGAATGGAGAAATAGAAAGGATTGATCCAATGGAGAGATTAAGCTCAGTGAAGGGGCATCTTGTTTCCTTCCCACTGGAATTCCTCAGCAAAGAAGATTTAAGACCTGTGTTCAATGAGAGTGAGTATTATGCATCTCAAGTTTTTCATTAA 3621 42.78 MVDCCCRLPMPARFLLDHLSTLFRISIFIPLESNRNVRRISWRKKNKKEKKRPSTRRNFDLSISLFSVFCGLRLFNCGRIRSNQAAVALDRLGMGSEQLMAGGGPRYVQMQSEPPSASMSSFFSFHHDAPEPTRIFDELPQATIISVSRPDAGDISPMLLSYTIECQYKQFKWRMLKKASHVFYLHFALKKRAFIEEIHEKQEQVKEWLQNLGIGDQTTVPQDEDGPDDETDPLHHDESSKNRDVPSSAALPIIRPALGRQHSMSDRAKNAMQGYLNHFLSNMDIVNSREVCRFLEVSKLSFSPEYGPKLKEDYVMVKHLPKIPKEDDSRKCCLCPWFGCCNDNWQKVWAVLKPGFLALLGDPFDTQPMDIIVFDVLPTSDGNGDGRVSLAKEIKERNPLRHSFKVTCGNRNIRIRAKNGSKVKDWVAAINDAGLRPPEGWCHPHRFGSYAPPRGLTEDGSKAQWFIDGLAAFEAIAFSIERAKSEIFICGWWLCPELYLRRPFVSNASSRLDALLEAKAKEGVQIYILLYKEVALALKINSVYSKRKLLGIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDYHICFIGGLDLCFGRYDTPEHKVGDCPPSVWPGKDYYNPRESEPNSWEDTMRDELDRKKYPRMPWHDVHCALWGPSCRDIARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLWNSRELEVEKKSFDNSRGTTVQDSFSRGSSFHDIPLLLPQEADGQDAENEGPKLNGLEPIVNPLDQPSKVSSGLSFSFRKIKVEPIGPDMPLKGFVDDLDHLDSHGKLSGDGKTHHRVKSSDFEWWETQDRGHHGGFTDESGQVGPCASCRCQVIRSVSQWSAGTSRTEESIHTAYCSLIEKAEHFIYIENQFFISGLSGDDSIRNRVLEALYRRIMRAYREKKIFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYDLLGSKVHDYISFYGLRAYGKLFDGGPVATSQVYVHSKIMIIDDCIALIGSANINDRSLLGNRDSEIAIVIEDNELINSYMGGQPWKAGKFCWSLRLSLWSEHLGLRPGQINQIVDPVADSTYKDTWMATAKTNTTIYQDVFSCLPNDLINSRAGLRQSVTIWKERLGHTTIDLGIAPEKLEFYKNGEIERIDPMERLSSVKGHLVSFPLEFLSKEDLRPVFNESEYYASQVFH 1206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5527441 5538279 - CePI673135_06g004920.1 Cec06g0492 205229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0492 1206 SUPERFAMILY PH domain-like 341 433 - -
Cec06g0492 1206 Pfam Phospholipase D Active site motif 570 597 IPR001736 GO:0003824(InterPro)
Cec06g0492 1206 CDD PLDc_vPLD1_2_yPLD_like_2 863 1047 - -
Cec06g0492 1206 PIRSF PLD_euk 781 1206 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Cec06g0492 1206 PIRSF PLD_euk 126 721 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Cec06g0492 1206 Coils Coil 191 211 - -
Cec06g0492 1206 PANTHER PHOSPHOLIPASE D 272 1187 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Cec06g0492 1206 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 570 597 IPR001736 GO:0003824(InterPro)
Cec06g0492 1206 CDD PH_PLD 286 433 - -
Cec06g0492 1206 SUPERFAMILY Phospholipase D/nuclease 843 1052 - -
Cec06g0492 1206 Gene3D Endonuclease Chain A 458 696 - -
Cec06g0492 1206 SMART pld_4 570 597 IPR001736 GO:0003824(InterPro)
Cec06g0492 1206 SMART pld_4 1003 1030 IPR001736 GO:0003824(InterPro)
Cec06g0492 1206 Gene3D Endonuclease Chain A 834 1060 - -
Cec06g0492 1206 ProSiteProfiles PH domain profile. 344 435 IPR001849 -
Cec06g0492 1206 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1003 1030 IPR001736 GO:0003824(InterPro)
Cec06g0492 1206 Pfam PLD-like domain 1004 1052 IPR025202 -
Cec06g0492 1206 SMART PH_update 309 437 IPR001849 -
Cec06g0492 1206 Gene3D - 336 433 IPR011993 -
Cec06g0492 1206 MobiDBLite consensus disorder prediction 215 246 - -
Cec06g0492 1206 SUPERFAMILY Phospholipase D/nuclease 415 689 - -
Cec06g0492 1206 FunFam Phospholipase 837 1057 - -
Cec06g0492 1206 CDD PLDc_vPLD1_2_yPLD_like_1 463 608 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0492 Cec-Chr6:5527441 Cec08g1449 Cec-Chr8:26250352 1.80E-36 dispersed
Cec02g1606 Cec-Chr2:33642447 Cec06g0492 Cec-Chr6:5527441 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0492 K01115 - csv:101211856 2204.1