Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0498 | ATGTCAAACGGATTTGCCAATGGCGAAGGTGATAAAAAGAAGAAGAAAATCGCCATCGTTAGTGTCTCTTCTTTAATCCTGGTGGCAATGGTTGTCGCCGTCACCGTCGGCGTCAACAGTGCACCTCACGAAGAGCACAGCGACGATCACGGTGGCGAGACTCATGAGATTTCATCAACGACTAAAGCAATCCAAGCCATTTGTCAACCTACGGATTACAAAGAATCCTGCGAGAAGAGTCTAATGGCAGAAGCCGGTAATACAACAGACCCAAAAGAGCTAGTGAAAGTGGGATTCAAAATCGCCACGAGGAATCTAAACGAGGCGATAAGAAATTCCACCACGCTTCAAGAATTAGCCAAAGACCCAAGAACCAACCAAGCCCTTCAAAATTGTCGTGAGCTTTTAGAATATGCGATTGATGATTTGAACGAATCGTTCGAAAGAATCGGGACCTTCCAAATGTCCAAACTGGATGAGTTCGTTGGGGATTTAAAGATTTGGCTGAGTGGGGCCATGACGTACGAACAAACTTGTTTGGATGGATTTGAAAACACGACAGGCGATGCTGGGGAGAGAATGAAAGAGTTTCTGAAGTCAGCTCAAGAAATGACAAGCAACGGTCTGGCAATAGTGAATGAATTGTCTGGCATTTTGGGGACACTCCAAATCCCTGGAATGAGTGGACGACGACTTTTGGAAGACGAAATGCCATCATGGGTGAGCGAGGGAAAGAGGCAACTGATGCAGGCAGGTGCGGCATCCATGAAGCCCGATTTGGTGGTGGCTCAAGATGGGAGTGGGAAGTACAAGACTATAAATGAAGCTTTGGTTGATGTGCCTTTGAAGAGTAACAAAACGTTTGTGATCTATGTGAAGGCTGGAATCTACAAGGAAATTGTTGTTATTCCAAAGGCTATGACTCATCTGACCATGTACGGTGACGGTCCAACCAAAACGGTGGTTACTGGTAGCTTAAACTTTATTGACGGTATTCAAACATTCAAGACGGCTACCTTCTCTGCAATTGGAGCTAATTTCTACGCTAGAGACATGGGATTCGAGAACACCGCTGGGGCTGCAAAGCACCAAGCCGTAGCCCTACGAGTCCAATCCGATAGATCAATCTTCTACAACTGTCAAATAGATGGCTACCAAGATACCCTCTACGCACACGCTCACCGTCAGTTCTACAGAGACTGCACAATCAGTGGCACCATCGACTTCGTGTTCGGTAACGCCGCCACCATTTTCCAGAACTGCAAGCTGGTGGTCCGAAAGCCAATGGATAACCAACAATGCATCGTCACGGCTCACGGCCGTCTCAACCGCCGTGAACCCACAGCATTGATCTTCCAAAGCTGCCATTTCATGGGTGACCCTGCTTACTTGCCCTTCAAGAACATCAACAAGGCATACTTGGGACGTCCTTGGAAGGAATATTCACGAACCATTATAATCGGGTCTCAAATAGACGATATCATCCAGCCTGAAGGATGGTTGCCATGGATGGGCGATTTTGGGCTCAAAACCTTGTTCTACGCCGAGGTACAGAACAAAGGGCCAGGGGCTGATGAAAGCAAGAGAGTGAAGTGGCGAGGAATTAAACATATTACGCCACAACACGCCGCGGATTTCACTCCTAGACGATTTATTGATGGCGATGCTTGGATTCCTGCTAAGGGAATTCCCTACTCTTCTGGAATGATGTGA | 1713 | 47.11 | MSNGFANGEGDKKKKKIAIVSVSSLILVAMVVAVTVGVNSAPHEEHSDDHGGETHEISSTTKAIQAICQPTDYKESCEKSLMAEAGNTTDPKELVKVGFKIATRNLNEAIRNSTTLQELAKDPRTNQALQNCRELLEYAIDDLNESFERIGTFQMSKLDEFVGDLKIWLSGAMTYEQTCLDGFENTTGDAGERMKEFLKSAQEMTSNGLAIVNELSGILGTLQIPGMSGRRLLEDEMPSWVSEGKRQLMQAGAASMKPDLVVAQDGSGKYKTINEALVDVPLKSNKTFVIYVKAGIYKEIVVIPKAMTHLTMYGDGPTKTVVTGSLNFIDGIQTFKTATFSAIGANFYARDMGFENTAGAAKHQAVALRVQSDRSIFYNCQIDGYQDTLYAHAHRQFYRDCTISGTIDFVFGNAATIFQNCKLVVRKPMDNQQCIVTAHGRLNRREPTALIFQSCHFMGDPAYLPFKNINKAYLGRPWKEYSRTIIIGSQIDDIIQPEGWLPWMGDFGLKTLFYAEVQNKGPGADESKRVKWRGIKHITPQHAADFTPRRFIDGDAWIPAKGIPYSSGMM | 570 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5588404 | 5590116 | + | CePI673135_06g004980.1 | Cec06g0498 | 205235 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0498 | 570 | FunFam | Pectinesterase | 253 | 569 | - | - | |
Cec06g0498 | 570 | ProSitePatterns | Pectinesterase signature 1. | 284 | 303 | IPR018040 | - | |
Cec06g0498 | 570 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 62 | 216 | IPR035513 | - | |
Cec06g0498 | 570 | MobiDBLite | consensus disorder prediction | 41 | 61 | - | - | |
Cec06g0498 | 570 | Gene3D | - | 253 | 569 | IPR012334 | - | |
Cec06g0498 | 570 | SMART | PMEI_2 | 59 | 211 | IPR006501 | GO:0004857(InterPro) | |
Cec06g0498 | 570 | MobiDBLite | consensus disorder prediction | 42 | 56 | - | - | |
Cec06g0498 | 570 | ProSitePatterns | Pectinesterase signature 2. | 403 | 412 | IPR033131 | - | |
Cec06g0498 | 570 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 58 | 216 | IPR035513 | - | |
Cec06g0498 | 570 | FunFam | Pectinesterase | 60 | 216 | - | - | |
Cec06g0498 | 570 | CDD | PMEI-like_3 | 66 | 217 | - | - | |
Cec06g0498 | 570 | SUPERFAMILY | Pectin lyase-like | 256 | 568 | IPR011050 | - | |
Cec06g0498 | 570 | NCBIfam | pectinesterase inhibitor domain | 59 | 215 | IPR006501 | GO:0004857(InterPro) | |
Cec06g0498 | 570 | Pfam | Pectinesterase | 259 | 555 | IPR000070 | GO:0030599(InterPro)|GO:0042545(InterPro) | |
Cec06g0498 | 570 | PANTHER | PECTINESTERASE | 15 | 560 | - | GO:0030599(PANTHER)|GO:0046910(PANTHER) | |
Cec06g0498 | 570 | Pfam | Plant invertase/pectin methylesterase inhibitor | 62 | 211 | IPR006501 | GO:0004857(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g1797 | Cec-Chr3:36200064 | Cec06g0498 | Cec-Chr6:5588404 | 5.10E-194 | dispersed | |
Cec06g0498 | Cec-Chr6:5588404 | Cec07g1549 | Cec-Chr7:31032126 | 9.60E-113 | dispersed | |
Cec11g0021 | Cec-Chr11:306833 | Cec06g0498 | Cec-Chr6:5588404 | 8.40E-136 | transposed | |
Cec05g0742 | Cec-Chr5:6111351 | Cec06g0498 | Cec-Chr6:5588404 | 2.00E-203 | wgd | |
Cec06g0498 | Cec-Chr6:5588404 | Cec09g0544 | Cec-Chr9:4669231 | 2.30E-90 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0498 | K01051 | - | csv:101221958 | 1033.86 |