Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0511 ATGGAGGAAGCCATTTCTCGAATCCTCACGGAGCTCGAAGAAGTTCGCCATTTCGACGACTCCACAACTCTCCATTCCCAACCTCCGCCGCCGCTCTCCGATTCCTCTCTCTTCGACCTTCAAAGCTTATTAGACAACTCAATCGGAACCGATGAACAACCACCACTCAATCGCCTCTACGACGACCTCTCGGCCAAATCCCTCTCTCCGTCTTCTCTTACCCGAGCCATCGCCTCCGCCATGGACGAGTCTTCCACTCACGTTTCGATTTTAGCTTCTAGAGTCTATCTCTCCCTTCTTCTGGCCCCAAATGCACCGGTGTTCACGCTGTTCAATCCGATGGATTTTCTTTCGTTTCTCAGGTCGATGAGGCGATTATTGAAGCAGCGACCGCGGGCTCAACCGGACCAGGATGATTCTAATAAGGAGTCTAATGCTCCCAAACGGAAGAGGAAAGCCGGTGTTAAGGGTAAGGGTTTGGGGAACTGTGCGCTGAGGCAGAGTTTTAGTGGCAGGTATGATGATGGTGAATTCGATGCAAGAGTCTTGTATCCTGTACTTGAGAGGTTAGAGAATTTAATGAGTTTGATTCATTTGGATCGATTTCCGGATAGTTTGAAATCTTTGATTGAAACTGTAATTGATATTCCAGTTTTGGCACTTGAAGTATGCACTAATTTAAGTATCTATAGTAAGTTCACTAATTTATGTTCACGGATTTTGAGCGCTACATTGCGTCCTGAGCATGGGGATCTATCGAGTACTGCCGTTGAGGTGATTAAGTCTCTGTCACCATTGATTCTTAATCATAAGGATCAGGCGCGAGCGTTTGCGCTAGGGTTTGTGACTATTCAAATAGCAAATGTAGCAAAGGAATCAGATGGTGTTAAGAGTGCTCTGGTGAATCTTCCAAGGTATTTGGTTCAGAAGGCTCCTGAGAAATCTGAGCCTCGTAGTTTAGCAGTTGATTCAATAATGGAGGTTGTTAAAGTGATGGAATTCCCCGATCAAATTGGGTTTGTGGATTATGTAGTGAAGATGACCAGAGGAAAGTCTAATCTTAGGCTGTTAGCGGTTGATCTCATCTCAATGCTGATAACGTCCTTGAGTGATCCAATGGCCATTGATTCCGAAAGCGAACTAAAGGATTCGTGGGGATTTGGGTGCTTGGTGGCATTGGTTCAACGTTGTTCAGATGCCAGTGCTCCAATTCGTGCTCGAGCACTTACCAACTTAGCTCACCTTGTGGTGTTCTTGTCTGAGAATGACAAGAATAAGGCCTTACTGGAGGAAGTGTTGGGGTCTGGTGACAGACATTGCAAAAAAAGTGGACGTGAAATTCATGCTCTTTTGCAAAAAAGATGTATGGATGAGAAGGCGGCAGTTAGGAAGGCTGCATTATTTCTGGTTACCAAGTGCACAACCCTCCTTGGTGGAGCAATGGATGGAGATATGCTGAAAACGGTGGGAATTGCTTGTTCTGACCCACTTGTTAGCATACGGAAAGCTGCAATGTCGGCTCTCTCAGAGGCCTTTCGAAGATTCCCAGATGAAAGTGTCATGGTCGAGTGGCTACACTCTATTCCACGTTTAATTGCTGACAGTGAATCTAGCATTCAAGAAGAGTGTGAACACTTGTTCCAAGAACTAGTACTAGACCGGTTGTCTAGAGTTGGATCTTCAAGTTTACCTAAAGGAGCATTGAATCTTCTTAAAGAGATGAGTCATGCAGAGGTAATTCCTTGGGTGAGGAAAGTTTGTGCTAATTTGGGAAAAAAGAATAAATTAAAACGCCCAATTGCGGATTCACTTCAGATAATTATAAAGACATCTGAATCCTTTTGGCTAAGCCAATCTTTGCCTCCAGAGAGGTGGACAGCTCCCCCAGGTGCCTGGTTCCTGCTGGCAGAAGTATCGACTTATCTTGGGAAAGCCGTTGATTGGGAGTTTCTTCATCATCACTGGAAACTCCTTGATGATCATGGTAGGACTGAGTTTCAGAGTCCAGTGGCTCAAGTAGGTTTATTTGGAGAGGAAAACAACTCAGAGTCAAATTCCGTCACTTGGGCTCAAGATCGACTTTTTCTCTTACAAACCATTTCTAATGTTTCTGTTGAGCTGCCTCCAGAACCTGCAGCGGAATTAGCTCATGAATTGCTTAAAAGGGTTGAAGAATTTAACATGCATTCAACGGAGGTGAATGCACATGTAAAAACACTTAAAACATTGTGTAAGCGGAAGGCTTTGCAATCTACTGAAGCCGATGCCCTTATCCTAAAATGGGTGAACCAGCTGCTTTCCAAAGCCTCTCACATATTGGAGAAGTACATATCCAAGCATGCAGAAGCAAACAAAGATGTGAACTTCGTAACTCCACCTCCTAAAAGTGGTAGTCGAATTGGGAAGAAAGCAACTGCCAGGAGCAAGTCCTTGTCCCGAGCAATCACTGCAGCTTACACCATTGGCTCTTTGATTCTCATTTGTCCATCGGCTGACATGACTACCATCATACCACTTCTCCACACCATTATCACTTCTGGAAACCGTGATCCCAAATCTAATAAACTACCAATTCAAACTGCATCTCTAAAGGAAACTGCCCCTTCTTTATACGTTCAAGCATGGTTGACAATGGGGAAGATTTGCCTTGCTGACGAGAAGCGTGCAAAGAGTTACATTCCTCTATTTGTACAGGAGCTTGGAAACAGTGATTGTGCAGCTCTTCGCAACAACCTTATTATCACAATGGCAGATTTTTGTGTACGCTATACTGCTCTAGTTGACTGCTACCTTACGAAAATCACAAAGTGCCTTCGGGACCCTTGTGAACTTGTCAGAAGATATACATTCATACTTCTATCGAGATTACTACAGAGGGACTATGTGAAATGGAGAGGGGTTTTGTTTCTTCGGTTTCTCTTGTCACTTGTTGATGAATCAGAGAAGATTCGTCAACTAGCAGATTTCCTTTTTGGGAACATTTTAAAAGTGAAGGCACCACTTTTGGCTTACAACAGTTTTGTAGAAGCAATTTATGTTTTGAATGACTGTCGTGCTCATTCTGGACATAGCGATTCAAATGCTTCACGAGCTGAAAGTCGACTATTCTCCATCCGAGGCAATGATGAAAGGTCGAGGTTCAAGAGAATGCACATTTATGTTTCTCTGTTGAAACAAATGGCTCCTGAGCATCTTTTGGCAACCTTTGCAAAGTTATGCGCAGAGATTCTTGTTGCAGCATCAGATGGTATGCTCAATATAGATGATACCACTGCACGGTCTGTTTTACAGGATACCTTTGATATTCTTGCTTGTAAAGAGATCCGACTATCGGTAAATCGAGTATCATCATCAGAATCTGGTGATGTAGATGAGGAAGGAGGCGAGAGCGGAGGAGCATCTGCTGCTAGAGGAAAGGTCATCACTCATGCAGTGAGAAAGACTCTCATTCAAAGCACCATACCCATCTTCATTGAGTTAAAAAGGCTAATGGAAAGCAAGAATAGCCCCCTTATAGGTTCCCTCATGGAATGTCTTCGAGTTCTTCTCAAAGACTACAAGAACGAAATCGATGACTTATTGGTAGCCGATAAGCAACTTCAGAAAGAGCTCCTTTATGACATTCAAAAGTATGAATCTACCAAAGCCAAGTCAGCTGCTGCCGAGGCGGTCAACGAGATGCATAAGTCAACTAACTATTTTTCGCCTGAGGCTCCTCCTCAAGCTAGAATTGCCATTAACAAGCTAACCTCAAAGATTCAAAATGACTTGAAAGTTGCTTCAGCCATTGCTGATGCAGCTGCTGCAGCCACAGCAAAATCTGTGCTTAGGGAAGTGAATAGAGGGGCTTCGACACCGCCTCTTGGTTCTCTAAGTTTGCCTAAACTCAAGTCTCGTACTGGTGGAAACAATTACACAAATACCTCACATTTTAACGTGATTGAATCTTTAAGAAAACGTCAGTCTTTTGAAAACAACGGCGGCCTTACGGGTAGAAGTTCAACTATTGTTTCTGCATCTGGTTCATCTGAAAGGATGTCAACATCTGCAATTATGGAAACAATTCCAAGCAAGTGGCAATGTCCGGTTTGGCAAGCTCCATGGAGAAATTATAGGTTGGCTCCAGTCTTGAATTCAGTGAATTATAAGGAGGAAGTAAGATTTACTGTAGGTCTTGCTGTCAGCAACAGGCATACCTACATGTTTTCAGCTGGTGATGACAAACAAGTTAAATGCTGGGACATGGAACAGAATAAGGTAATTTGTCATTACCATGGTCATCTGAGTGGTGTTTACTATTTGGCTCTTCATCCAAAAATCGATGTTTTGCTTACTGGGGACATGATTCTGTCTGCTGGGCGTGGGATATTCAAAGTAAGATGCAAATTAATGCCCTCTTTGGGCATGATAAGACAGTTTGCTCGGTTTTTACTTAACCAGCGTTTTCAGCAGAAGACTATAATCAATGCAATAACTGTCAATGAGGAGGGTGTTATGGTGACTGGAGGATCATCATTGGAATCTGGTGATGTAGACGAGGAAGGAGGCGAGAATGGAGGAGCATTTGCTGCTAGAGAAAAGATCACCACTCATGAAGTGAGAAAGAGTCTCATTCAAAACAACATATCCATCTTCATTGAGTTAAAAAGGCTTATGGAAAGCAAAAATTGCCCCCTTATAGCTGCTGCAGCCACGGCGAAGTTTGTGCTTAGGAAAGTGAACAGAGGGGCTACGACACCGCCTCTCAATTCTCTAAGTTTGCCAAAACTCAAGTCTCATACTGGTGGAAACAATGGCACAACAGCCCGACTCCCAGCTCGGTGTTCATCGGTAAGAAATCTTTTGTACGAATTCGATCTTCAGAATGAATCAAGATCCTCATCTTTCTTCATGTTTCAAGCCATCAATCTCTTTATATCAGGTTTTTTGGAAGATTGTGTCGGTGCGATTATGGATGGGAATAAGGACGAAGCTTTAAGATGTATTCGCATGGCGGAAGAGGCAATTGCATCGGGGAATAAAGAGCGAGCACTTAGATTCATTAAAATTGCTCGTCGCCTTAATCAGAGTTTGCAAGTGGATGAGCTATTGACGGCGTGCGAAGAGATCGGTTCGGGGTCGCCTTCATCTTCTTCCGATGAGAAACGCGCGGGAAAAGTTGAGAGTGTTTCTGGTTCAGTGAAACATGTTGATGGTTTGAATGGTGAACGTAATTACACCATAGAACACGTTCAATTGATTAGGCAGATAAAAACAACCAAGGACTATTACAGAATTCTTGGTGTGGAGAAAACTAGTTCGGCTGAAGAGATTAAGAAAGCTTATAAGAAATTGTCCTTGAAAGTTCACCCTGATAAAAACAAGGCTCCTGGTTCAGATGAAGCATTCAAGAAGTTATCCAAGGCTTTCATGTGTTTGAGCGATGATACTTTGAGGAGGCAATATGATCACACGGGTTTGGTTGATCAGTATGAGTACAACCAACAGCATAATGTAAGGCATAGGAGAAGGAGAACGGGTCATGATTTGTTTGAAGAAAATTTCGATCCTGATGAGATACTCAGAGCGTTCTTTGGGCAGGGAAATATGTTTCAGACGAGTCGTGCTTATACTTATAGAACTGGAGGTGCGGGAAGCCAACAGAGGACAGAATCTGATGGGGGAGGTCCCAGCTTGTTGATTATTCTTCTAATGTTACCATTCTTGTTAATTTGCTTGTTGGCTTATATGCCATTTCCAGAGCCGGACTATGCTTTGCATAAAAACCTATCCTATAGTGTTCCTATGGCTACGGAGAAACATGGAGTGGAATTTTTTGTTAAATCATCTGATTTTGATGTAAGATATCCTCTTGGAAGCCCAGGTCGAGCTGAAATAGAGAATAGTGTGCTGAGGGATTATAGAAACATGGTTTGGCGTTATTGTCATGTAGAACTCCAGAGACGCCAGTGGAATAGAAATCTCCCAACTCCTCACTGCGAGAAGCTGAATAATCTCGGTGTAGCATAA 6009 43.17 MEEAISRILTELEEVRHFDDSTTLHSQPPPPLSDSSLFDLQSLLDNSIGTDEQPPLNRLYDDLSAKSLSPSSLTRAIASAMDESSTHVSILASRVYLSLLLAPNAPVFTLFNPMDFLSFLRSMRRLLKQRPRAQPDQDDSNKESNAPKRKRKAGVKGKGLGNCALRQSFSGRYDDGEFDARVLYPVLERLENLMSLIHLDRFPDSLKSLIETVIDIPVLALEVCTNLSIYSKFTNLCSRILSATLRPEHGDLSSTAVEVIKSLSPLILNHKDQARAFALGFVTIQIANVAKESDGVKSALVNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDYVVKMTRGKSNLRLLAVDLISMLITSLSDPMAIDSESELKDSWGFGCLVALVQRCSDASAPIRARALTNLAHLVVFLSENDKNKALLEEVLGSGDRHCKKSGREIHALLQKRCMDEKAAVRKAALFLVTKCTTLLGGAMDGDMLKTVGIACSDPLVSIRKAAMSALSEAFRRFPDESVMVEWLHSIPRLIADSESSIQEECEHLFQELVLDRLSRVGSSSLPKGALNLLKEMSHAEVIPWVRKVCANLGKKNKLKRPIADSLQIIIKTSESFWLSQSLPPERWTAPPGAWFLLAEVSTYLGKAVDWEFLHHHWKLLDDHGRTEFQSPVAQVGLFGEENNSESNSVTWAQDRLFLLQTISNVSVELPPEPAAELAHELLKRVEEFNMHSTEVNAHVKTLKTLCKRKALQSTEADALILKWVNQLLSKASHILEKYISKHAEANKDVNFVTPPPKSGSRIGKKATARSKSLSRAITAAYTIGSLILICPSADMTTIIPLLHTIITSGNRDPKSNKLPIQTASLKETAPSLYVQAWLTMGKICLADEKRAKSYIPLFVQELGNSDCAALRNNLIITMADFCVRYTALVDCYLTKITKCLRDPCELVRRYTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDSNASRAESRLFSIRGNDERSRFKRMHIYVSLLKQMAPEHLLATFAKLCAEILVAASDGMLNIDDTTARSVLQDTFDILACKEIRLSVNRVSSSESGDVDEEGGESGGASAARGKVITHAVRKTLIQSTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTKAKSAAAEAVNEMHKSTNYFSPEAPPQARIAINKLTSKIQNDLKVASAIADAAAAATAKSVLREVNRGASTPPLGSLSLPKLKSRTGGNNYTNTSHFNVIESLRKRQSFENNGGLTGRSSTIVSASGSSERMSTSAIMETIPSKWQCPVWQAPWRNYRLAPVLNSVNYKEEVRFTVGLAVSNRHTYMFSAGDDKQVKCWDMEQNKVICHYHGHLSGVYYLALHPKIDVLLTGDMILSAGRGIFKVRCKLMPSLGMIRQFARFLLNQRFQQKTIINAITVNEEGVMVTGGSSLESGDVDEEGGENGGAFAAREKITTHEVRKSLIQNNISIFIELKRLMESKNCPLIAAAATAKFVLRKVNRGATTPPLNSLSLPKLKSHTGGNNGTTARLPARCSSVRNLLYEFDLQNESRSSSFFMFQAINLFISGFLEDCVGAIMDGNKDEALRCIRMAEEAIASGNKERALRFIKIARRLNQSLQVDELLTACEEIGSGSPSSSSDEKRAGKVESVSGSVKHVDGLNGERNYTIEHVQLIRQIKTTKDYYRILGVEKTSSAEEIKKAYKKLSLKVHPDKNKAPGSDEAFKKLSKAFMCLSDDTLRRQYDHTGLVDQYEYNQQHNVRHRRRRTGHDLFEENFDPDEILRAFFGQGNMFQTSRAYTYRTGGAGSQQRTESDGGGPSLLIILLMLPFLLICLLAYMPFPEPDYALHKNLSYSVPMATEKHGVEFFVKSSDFDVRYPLGSPGRAEIENSVLRDYRNMVWRYCHVELQRRQWNRNLPTPHCEKLNNLGVA 2002
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5706128 5721329 + CePI673135_06g005110.1 Cec06g0511 205248

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0511 2002 SMART dnaj_3 1754 1811 IPR001623 -
Cec06g0511 2002 Pfam DnaJ domain 1755 1816 IPR001623 -
Cec06g0511 2002 PANTHER CONDENSIN 1516 1561 IPR026971 GO:0000779(PANTHER)|GO:0000799(PANTHER)|GO:0007076(PANTHER)|GO:0007076(InterPro)|GO:0010032(PANTHER)|GO:0042393(PANTHER)
Cec06g0511 2002 PRINTS DnaJ domain signature 1757 1775 IPR001623 -
Cec06g0511 2002 PRINTS DnaJ domain signature 1791 1811 IPR001623 -
Cec06g0511 2002 PRINTS DnaJ domain signature 1775 1790 IPR001623 -
Cec06g0511 2002 SUPERFAMILY ARM repeat 340 1192 IPR016024 -
Cec06g0511 2002 Gene3D - 354 556 IPR011989 -
Cec06g0511 2002 Coils Coil 1176 1203 - -
Cec06g0511 2002 MobiDBLite consensus disorder prediction 129 150 - -
Cec06g0511 2002 MobiDBLite consensus disorder prediction 128 158 - -
Cec06g0511 2002 CDD DnaJ 1755 1808 IPR001623 -
Cec06g0511 2002 SUPERFAMILY Chaperone J-domain 1751 1831 IPR036869 -
Cec06g0511 2002 SUPERFAMILY WD40 repeat-like 1391 1447 IPR036322 GO:0005515(InterPro)
Cec06g0511 2002 Pfam Domain of unknown function (DUF1977) 1913 1983 IPR015399 -
Cec06g0511 2002 Gene3D - 1376 1454 IPR015943 GO:0005515(InterPro)
Cec06g0511 2002 ProSiteProfiles dnaJ domain profile. 1755 1819 IPR001623 -
Cec06g0511 2002 Gene3D DnaJ domain 1752 1870 IPR036869 -
Cec06g0511 2002 Pfam non-SMC mitotic condensation complex subunit 1 908 1076 IPR032682 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0511 K11491 - - csv:116405799 1985.69
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0511 Cec-Chr6:5706128 Cec06g1269 Cec-Chr6:25791825 6.20E-58 dispersed
Cec06g0508 Cec-Chr6:5681181 Cec06g0511 Cec-Chr6:5706128 5.20E-19 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g188 . . . . . . . Bma05g01033 . Cmo17g00319 . . . . . . . . . . . . . . Cla06g00476 Cam06g0510 Cec06g0511 Cco06g0514 Clacu06g0494 Cmu06g0496 Cre06g1267 . . Cone7ag0143 Cone4ag0147 . . Chy11g01513 . . . . . Bpe05g00834 . . . . . . . Cma17g00329 . Car17g00303 Cpe12g00279 . Bhi12g02049 . . . . . . . . . . . . . Lsi09g01433 . . Cme11g02015
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010431 2 2 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 1 2 1 2 1 1 31