Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0567 ATGGGTTGTATCCATACAAAATGTTGCTGTCGCTACCCAAAATCGTTGGTTGGAGAATCCCAAGACTTTCGACAAGAGGTTCCTTACTGTCTTCAAGATAAGAACACTGTGATAGAGAAATCATTGGAGTTGATTCCTGTTGCTTCGCACAACTATCATTTGGAATACTTGGTACTGGCTCAGCGTGGTTACTACCCTGAATCTCCTGATAAAGAAAACCAAGACAGTTTCTGCATTAGAACAAATATTCAAGGTAACCCAAATGCCCATTTCTTTGGTGTTTTTGATGGGCACGGTCAATTTGGAATGCAGTGTTCAAATTTTGTGAAGGATAGACTAATAGAAAAGCTATGTAATGATCCCACATTGTTAGATGATCCAGTACAAGCTTATAATTCAGCATTTTTGTCTACAAATGATGAGTTACATACAAGTGAGATTGATGATTCCATGAGTGGAACAACTGCAATTACAGTTCTTGTTGTTGGGGATACCCTTTATGTGGCTAATGTTGGGGATTCAAGAGCTGTAATTGCAGTTAAAGAAGGGGATAGTGTTCTTGCTAAGGACTTGTCTAATGATCAAACACCATTTAGAAAAGATGAGTATGAGAGAGTTAAGCTTTGTGGGGCTAGAGTTCTGAGTGTTGATCAAGTGGAAGGACTTGTGGATCCTGATATTCAATGCTGGGGCGATGAAGAAAGTCAGGGCGGCGATCCGCCTCGACTGTGGGTTCAAAATGGATTGTATCCTGGAACTGCGTTTACTAGGAGCATTGGTGATAGTACTGCAGAGAAGATTGGTGTAAATGCTGTTCCTGAGGTTTTAGTTCTTCAGCTTAACCCCAATCATCTTTTCTTTGTGGTTGCTAGTGATGGAGTTTTCGAGTTCCTTTCAAGTCAAACTGTTGTTGATATGGCATCGAGTTATGCAGATCCTCAAGATGCATGCACTGCCATTGCTGCCGAGTCGTATAAACTATGGATGGAACATGAAAATCGGACCGATGATATAACGATCATTGTTGTTCAAATCAAAGGCTTGTCTAATTCAGGTGCTGAGAATCCACACCTTTATAATGTGTTGCTATAA 1092 40.48 MGCIHTKCCCRYPKSLVGESQDFRQEVPYCLQDKNTVIEKSLELIPVASHNYHLEYLVLAQRGYYPESPDKENQDSFCIRTNIQGNPNAHFFGVFDGHGQFGMQCSNFVKDRLIEKLCNDPTLLDDPVQAYNSAFLSTNDELHTSEIDDSMSGTTAITVLVVGDTLYVANVGDSRAVIAVKEGDSVLAKDLSNDQTPFRKDEYERVKLCGARVLSVDQVEGLVDPDIQCWGDEESQGGDPPRLWVQNGLYPGTAFTRSIGDSTAEKIGVNAVPEVLVLQLNPNHLFFVVASDGVFEFLSSQTVVDMASSYADPQDACTAIAAESYKLWMEHENRTDDITIIVVQIKGLSNSGAENPHLYNVLL 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6278687 6281162 - CePI673135_06g005670.1 Cec06g0567 205304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0567 363 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169(InterPro)
Cec06g0567 363 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Cec06g0567 363 Gene3D - 48 347 IPR036457 -
Cec06g0567 363 Pfam Protein phosphatase 2C 72 323 IPR001932 -
Cec06g0567 363 SMART PP2C_4 56 343 IPR001932 -
Cec06g0567 363 PANTHER PROTEIN PHOSPHATASE 60 344 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec06g0567 363 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 347 - -
Cec06g0567 363 CDD PP2Cc 71 345 IPR001932 -
Cec06g0567 363 SUPERFAMILY PP2C-like 48 347 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0567 Cec-Chr6:6278687 Cec11g0982 Cec-Chr11:16328819 7.40E-26 dispersed
Cec06g0972 Cec-Chr6:13706746 Cec06g0567 Cec-Chr6:6278687 2.60E-40 transposed
Cec05g0661 Cec-Chr5:5357613 Cec06g0567 Cec-Chr6:6278687 3.80E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0567 - - - 0.0