Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0576 | ATGCAGGCCGATCAGAGAAGAAAGTCGTCTATAGATGTGGATTTCTTCACAGAATATGGTGAGGGGAGCAGGTATAGAATAGAGGAAGTAATTGGTAAAGGAAGTTATGGTGTTGTTTGCTCTGCATATGACACTCATACTGGAGAGAAAGTTGCAATTAAGAAAATCAACGATATCTTTGAGCATGTCTCTGATGCAACTCGCATTCTCCGTGAGATAAAACTTTTAAGACTATTGAGACATCCAGACATCGTGGAGATAAAGCACATCCTTCTACCTCCATCTAGAAGGGAATTCAAGGACATTTATGTTGTGTTTGAGCTCATGGAATCTGATCTACATCAAGTTATCAAAGCAAATGATGATTTGACTCCAGAACATTATCAGTTCTTTCTTTACCAGCTTCTTCGAGGCTTGAAATACATACACACAGCCAATGTCTTCCACCGGGACCTAAAACCCAAAAACATCTTAGCAAATGCTGACTGCAAACTCAAGATCTGTGACTTTGGTCTAGCACGCGTTGCGTTTAATGATACTCCTACTGCTATTTTCTGGACTGACTATGTAGCAACAAGGTGGTACAGAGCTCCTGAACTCTGTGGTTCATTTTTCTCAAAGTATACACCAGCAATAGATATATGGAGCATTGGCTGCATCTTTGCGGAGCTTTTAACTGGAAAACCACTTTTCCCTGGAAAGAATGTAGTCCACCAATTAGATTTGATGACTGATTTTCTGGGAACCCCGAATGCAGAAGCCATTGCCAGGGTACGAAATGAGAAAGCTCGGAGATACTTAAGCAGTATGCGAAAGAAGAAGCCTGTTCCTTTCTCCCAGAAGTTTCCTCATGCAGATCCACTTGCACTTCGCTTGTTGGAAAGAATGTTGGCTTTTGAGCCAAAGGATCGACCTACAGCAGAGGAGGCCCTTGCAGATCCATATTTTAAAGGCTTAGCGAAGGTTGAGAGAGAGCCATCTGCTCAACCTGTTACTAAGATGGAATTTGAATTTGAGAGACGAAGGATAACCAAAGAAGATGTAAGGGAGCTTATTTACCGGGAGATTCTCGAGTATCATCCAAAGATGTTGAAGGAATTCTTAGATGGATCAGAACCCACTGGTTTCATGTATCCAAGTGCGGTCGACCATTTTAAGAAGCAATTTGCTTTCCTTGAGGAACACTATGGAAATGGTGCAACTGTCGCTCCTCCTGAAAGACAGCATGCATCCTTGCCTAGGCCATGTGTTTTATATTCAGATAACATGGTGCAGAACTCGGCCCAAGTTGCGAATGACCTATCCAAATGTTCCATCAAAGAAGTTGAGAGGCCACAAGTGGATAGGACTTGCAATATTCCTTTGGCTAGAGTTCCTATTCAAGTTCCTCAATCTATTCAAGCAGGCAATGGTGCAAGGCCTGGAAAAGTTGTTGGCTCCGTGTTGCGATACAACAACTGCGGAGCAACAGCAGCAGCAGTGGCACCGGAAGTTTTTGAACAGCGGAGGATGACCAGAAATCCTTCCATTCCACCACAGTACGCTGCTAATAACTGTTCATATCCAAGAAGAAACTCATCCTGTAAAAATGAAAGAACTGATGATGAAACCATTGAAGGTCCAAACGGTTTGCAGGCAAAACCTCAGTACATAGCTAGAAAAGTTGCTGCTGCCCAAGGTGGACCAGGAAATAACTGCATTGTGACTGGCTGCAGCTTACCTGGCACTTGA | 1731 | 43.15 | MQADQRRKSSIDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPNAEAIARVRNEKARRYLSSMRKKKPVPFSQKFPHADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLDGSEPTGFMYPSAVDHFKKQFAFLEEHYGNGATVAPPERQHASLPRPCVLYSDNMVQNSAQVANDLSKCSIKEVERPQVDRTCNIPLARVPIQVPQSIQAGNGARPGKVVGSVLRYNNCGATAAAVAPEVFEQRRMTRNPSIPPQYAANNCSYPRRNSSCKNERTDDETIEGPNGLQAKPQYIARKVAAAQGGPGNNCIVTGCSLPGT | 576 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6367183 | 6372260 | - | CePI673135_06g005760.1 | Cec06g0576 | 205313 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0576 | 576 | ProSiteProfiles | Protein kinase domain profile. | 25 | 316 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0576 | 576 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 22 | 357 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Cec06g0576 | 576 | Pfam | Protein kinase domain | 25 | 316 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0576 | 576 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 55 | IPR017441 | GO:0005524(InterPro) | |
Cec06g0576 | 576 | SUPERFAMILY | Protein kinase-like (PK-like) | 22 | 320 | IPR011009 | - | |
Cec06g0576 | 576 | SMART | serkin_6 | 25 | 316 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0576 | 576 | ProSitePatterns | MAP kinase signature. | 60 | 163 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0576 | 576 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 361 | - | - | |
Cec06g0576 | 576 | FunFam | Mitogen-activated protein kinase | 15 | 119 | - | - | |
Cec06g0576 | 576 | FunFam | Mitogen-activated protein kinase | 111 | 339 | - | - | |
Cec06g0576 | 576 | Gene3D | Transferase(Phosphotransferase) domain 1 | 111 | 339 | - | - | |
Cec06g0576 | 576 | CDD | STKc_TDY_MAPK | 24 | 361 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec06g0576 | Cec-Chr6:6367183 | Cec06g1641 | Cec-Chr6:30022023 | 1.50E-206 | dispersed | |
Cec06g0576 | Cec-Chr6:6367183 | Cec02g1924 | Cec-Chr2:37076918 | 1.70E-213 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72070 | PF00069 | Pkinase | 5.60E-68 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0576 | - | - | - | 0.0 |