Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0587 ATGGACAATCGCCACCATTCCATTCACTCTGATTCTGAATCGATCAAATTCCACAAGAAACTCGAAAATTTTCCTGGGGTAGGAAAAGAACGAACTTATAGAACTTGGATTCTTCGGTTTTCTACTATGGAAATGGATCGTGATGATTTGAGTGTTCGATTATCTGCTCTATGGAACATCATTGGTCTAAAGAGAAGGCTTAAAGAGGACAGAATTCCTTGCCAAATTGAAGAGGGTCTGTTCTTAGGCTCTGTTGGAGCTGCCCATAACAAAGATCAATTGAAGAAATTGAATATCACTCACATTTTAACCATTGCTTGTTCTTTGCCACCTGCTGATCCAAATGATTTTGTATGTAAAGTAGTTGGTGTCTTGGACACTAGAGATGCAGATATTAAACAACACTTTGATGATTGTTTCAATTTTATCGATGAGGGAAGACAATCTGGTGGAGGGGTCTTGATTCATTGCTTTGCTGGAATATCCAGAAGTGTAACCATTACAGTTGCCTATCTGATGAAAAAGCGTGGTATGAATCTAACTCAAGCATTGGAACACGTCAAGAGTAGACGACCGCAGGCAGCTCCAAATGTTGGTTTCATGGTTCAACTCAAGGACTTTGAAACAGCTCTTCAAGCTAGCAGATGA 648 39.81 MDNRHHSIHSDSESIKFHKKLENFPGVGKERTYRTWILRFSTMEMDRDDLSVRLSALWNIIGLKRRLKEDRIPCQIEEGLFLGSVGAAHNKDQLKKLNITHILTIACSLPPADPNDFVCKVVGVLDTRDADIKQHFDDCFNFIDEGRQSGGGVLIHCFAGISRSVTITVAYLMKKRGMNLTQALEHVKSRRPQAAPNVGFMVQLKDFETALQASR 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6546061 6548998 - CePI673135_06g005870.1 Cec06g0587 205324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0587 215 FunFam Dual specificity phosphatase 12 74 214 - -
Cec06g0587 215 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 134 192 IPR000387 GO:0016311(InterPro)
Cec06g0587 215 Gene3D Protein tyrosine phosphatase superfamily 66 215 IPR029021 -
Cec06g0587 215 SMART dsp_5 72 210 IPR020422 GO:0006470(InterPro)
Cec06g0587 215 CDD DSP 73 206 - -
Cec06g0587 215 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 73 212 IPR029021 -
Cec06g0587 215 ProSiteProfiles Dual specificity protein phosphatase domain profile. 72 213 IPR020422 GO:0006470(InterPro)
Cec06g0587 215 Pfam Dual specificity phosphatase, catalytic domain 80 209 IPR000340 GO:0016311(InterPro)
Cec06g0587 215 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 52 210 - GO:0004721(PANTHER)|GO:0008330(PANTHER)|GO:0017017(PANTHER)|GO:0033550(PANTHER)|GO:0043409(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0587 Cec-Chr6:6546061 Cec10g1377 Cec-Chr10:28067476 2.90E-14 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0587 - - - 0.0