Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0597 ATGCAAGATTTCTTCGGATCTGTTCGTCGATCCTTAGTATTTCTAGCTCCCGACGGTGACGACGGTGGGAGGTTCGGTGGCCTTGTCGAGAAGATCGGCTCTAGCATCCGTAAATCTCGAAATGGACTGTTTTCTAAACAGTCACTGCGGGCTCTGCCTCCGGTTGCGAAGGACGATGCACCTCCGATTTGGTGGCGGAAGGGAGAGTTGATAGGATGTGGTGCTTTTGGTCGAGTTTATATGGGGATGAATCTCGATTCTGGAGAGCTTCTTGCAGTCAAACAAGTCTCAATTGCGGCTAATAGTGCTTCAAGGGAGAAAGCCCAAGCTCACATACGGGAGCTGGAGGAGGAAGTGAGGCTTTTGAAGAATCTTTCTCACCCCAATATTGTGAGATATCTGGGAACTGCAAGAGAAGAAGATTCATTAAATATTCTATTGGAGTTTGTTCCTGGAGGATCAATATCTTCTTTGTTAGGGAAATTTGGGTCTTTCCCCGAGTCTGTTATAAAGACCTACACTAAGCAGCTATTATTGGGGCTTGAGTACCTTCATAAAAACGGCATCATGCATAGGGATATAAAGGGTGCAAATATTCTTGTAGACAATAAGGGGTGTATTAAACTTGCAGATTTTGGTGCATCCAAGAAAGTGGTTGAGCTGGCAACTATAAATGGAGCCAAATCAATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACTGGACATAGCTTCTCTGCTGATATATGGAGTGTGGGGTGTACTGTTATTGAAATGGCAACAGGGAAACCTCCATGGAGCCAACAGTATCAAGAGGTCGCTGCTCTTTTCCATATAGGAAATACTAAGTCCCATCCGCCCATTCCTGAGAATCTATCTGCTGAGGCTAAAGATTTTCTGTTAAAATGTCTACAAGAGGAACCAAACTCAAGGCCTACTGCATCAGATTTGCTGCAGCATCCATTTGTCTCATGTGAGTATCAAGAACCTGTTGCAGTAGTCCTTGCCTCTTCTGTGGAATCTGGGAAACAGATGGCTGATTCTAGGCTGAACTCCAATGATCTTAAAAAGTCTACAATCCAACGTTCAACCTGTGAGGGCTTGAAAGATATTTGTGAAATGGGTAGCTTGAGGTGCTCTTCTGTATTTTCTGGGAACTATGGGTCACAGTCCAACTGGGGCTCGAGCAATTTTGAGGATGACATGTGCCAGATAGATGATAAAGATCTGTTTGTTAGTTCATCAATGAAGTACAAATCTATTTTATCATCAACTGATTTGAATAAGAGTTTCAATCCTATGTGTGAACCCACTGATGACTTGGATGAGAGCTCAGAGTTGGGAGGCAATTTAATGGAATTGTCTGGCGTTCAAACTGGCAAGGGGAGTGACTTCACTTTTCCTTGTGGTCAATCAGCAGCTGAGGATGATGAAGAGGTTACGGAATCAAAGATTAAAGCCTTCCTGGATGAGAAGGCTCTAGAACTAAAGAAGCTGCAAACACCTTTATACGAAGAGTTCCGTAGCACAGTTAATGCAGCTAATGCATTAGGAACAGTTGGAATTGAGAATATCAAGAGCGTGTCTAAGTTTTTGAAATTGCCTCCCAAATGTGGGTCACCAAGTAAGCTGCGTGGTAAAAGACTCTCATCAATTGATGCTGGTAACTGTTCCAGCCGTCAGAGCCGTATAAAACAAGCTGGCATATTGCAAGATCGAGCTTTGCAGGAAATTCAGTCGCCACAACTTGGGGAATGGAACAACTTACTTCAAACCCAGCCAGACTCTTCTACACCAAGTTTCTCTGAAAGACAAAGGAAATGGAAAGAAGAGCTTGAGGAAGAACTTAAAAGGAAACGAGAAATGATGCGGAGAGGAATTGTAGGAGCAATTCACTAA 1911 43.49 MQDFFGSVRRSLVFLAPDGDDGGRFGGLVEKIGSSIRKSRNGLFSKQSLRALPPVAKDDAPPIWWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVSIAANSASREKAQAHIRELEEEVRLLKNLSHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIKTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGNTKSHPPIPENLSAEAKDFLLKCLQEEPNSRPTASDLLQHPFVSCEYQEPVAVVLASSVESGKQMADSRLNSNDLKKSTIQRSTCEGLKDICEMGSLRCSSVFSGNYGSQSNWGSSNFEDDMCQIDDKDLFVSSSMKYKSILSSTDLNKSFNPMCEPTDDLDESSELGGNLMELSGVQTGKGSDFTFPCGQSAAEDDEEVTESKIKAFLDEKALELKKLQTPLYEEFRSTVNAANALGTVGIENIKSVSKFLKLPPKCGSPSKLRGKRLSSIDAGNCSSRQSRIKQAGILQDRALQEIQSPQLGEWNNLLQTQPDSSTPSFSERQRKWKEELEEELKRKREMMRRGIVGAIH 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6653700 6658395 + CePI673135_06g005970.1 Cec06g0597 205334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0597 636 ProSiteProfiles Protein kinase domain profile. 65 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0597 636 Gene3D Transferase(Phosphotransferase) domain 1 65 368 - -
Cec06g0597 636 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 55 329 IPR050538 -
Cec06g0597 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g0597 636 FunFam Serine/threonine-protein kinase STE11 62 155 - -
Cec06g0597 636 CDD STKc_MAPKKK 65 327 - -
Cec06g0597 636 SMART serkin_6 65 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0597 636 MobiDBLite consensus disorder prediction 593 612 - -
Cec06g0597 636 Pfam Protein kinase domain 66 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0597 636 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524(InterPro)
Cec06g0597 636 Coils Coil 606 629 - -
Cec06g0597 636 SUPERFAMILY Protein kinase-like (PK-like) 65 328 IPR011009 -
Cec06g0597 636 Coils Coil 98 125 - -
Cec06g0597 636 FunFam Mitogen-activated protein kinase kinase kinase 2 64 356 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1662 Cec-Chr2:34296098 Cec06g0597 Cec-Chr6:6653700 2.50E-208 dispersed
Cec04g0152 Cec-Chr4:6133797 Cec06g0597 Cec-Chr6:6653700 1.40E-31 dispersed
Cec06g0597 Cec-Chr6:6653700 Cec08g1606 Cec-Chr8:27519636 1.40E-59 dispersed
Cec04g0760 Cec-Chr4:26944015 Cec06g0597 Cec-Chr6:6653700 1.40E-06 transposed
Cec10g1194 Cec-Chr10:26011144 Cec06g0597 Cec-Chr6:6653700 2.70E-63 transposed
Cec02g1707 Cec-Chr2:34799843 Cec06g0597 Cec-Chr6:6653700 5.10E-26 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72071 PF00069 Pkinase 3.30E-73 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0597 K20606 - csv:101217427 1202.96