Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0622 ATGAATGGTTCTTCAACAACAAATTCTGAACCAGACATCTCTGAATATGTTGAAGTTGATCCTACCGGAAGATATGGAAGATACAATGAAGTTCTTGGCAAAGGAGCATCGAAGACAGTTTACAGAGCTTTTGATGAATACGATGGCATTGAAGTGGCGTGGAATCAAGTGAAGCTTTGTGATTTTCTTCAAACTCCTGAAGATCTTGAAAGGCTGTACAGAGAAATCCATTTGTTGAAGACACTAAAACACAAAAACATAATGAAATTTTATTCTTCTTGGGTTGACACTGCAAATAGAAACATTAACTTTGTAACAGAGATGTTCACTTCTGGGACTCTCAGACAATATAGGCTGAAGCATAAGAGAGTGAATATCAGAGCTGTGAAGCATTGGTGTAGACAGATTTTAAAAGGGCTTCTCTATCTTCACAGCCATGACCCTCCTGTGATCCACAGAGACCTTAAATGTGATAATATTTTTGTAAATGGGAATCAAGGGGAAGTCAAAATTGGTGATCTTGGCCTTGCTGCTATTCTTCGTAAATCCTATGTAGCTCGATGTGTTGGAACACCAGAGTTTATGGCTCCAGAGATTTATGAAGAGGAGTATAATGAATTGGTTGATATATATTCTTTTGGAATGTGTATTTTAGAGATGGTCACTTTTGAATATCCATACAGTGAATGCACTCACCCTGCTCAGATTTACAAGAAAGTTATCTCTGGGAAGAAACCAGATGCTCTGTATAAGGTAAAGGATCTCGAGGTTCGATATTTCGTCGAGAAATGTTTGGCTACTGTGTCAACTAGGCTGTCTGCTAGGGAGCTTTTAAACGACCCTTTTCTTCAAATTGATGGTTGTGATTCTTTACTGAAGCCAATAGAGTACTATTCAGAATATGATGAAGTGAACAATTCCCTTATCAGAGGAGGGCCTTTTTATGGAATTCCTCATGGTTCTTTGGATAATGGGTATGTGAATTATTTTGGTCATGAGGCTGGGAATGGTTTGGATTACTGTCCGATTGATAACGAAGCGAATGAAATCGATCTTTTCTCCTGTCAAGAGGATGAGCATTTGGCAGATGTTGATATCACTATTAAAGGGAGAAGAAGAGGTGACGATGATATCTTTCTTCGACTTCGGATTGCAGATAAAGAAGGTCGAATTCGAAACATCTACTTTCCCTTCGATTTAGAGAATGATAGTGCTTTGAGTGTTGCAAATGAGATGGTTTCTGAGCTTGACATTACTGATCAAGATGTGAAGAAGATTGCTGATATGATAGATGGTGAAATTGCTACATTGGTGCCAGAGTGGAAGAGGGGAAAAAGTTCAGAGGAAACTCCAAATTGCACTGATTCTAATGTTTGTCACAATTGTGCTTTAAACAATTCTCTTTTGGATTATGTATCGCCGAATAATCCCGCGACGAAGAACTTGCACATTCTTCAGTGTTCTCAAGAGCATGGCTGTGCTTCTATCCATGGACGTTTTGAAGAGATTACATACCAAGTTGAGGGGTCAGATCAATTCAATGGAGACGAAAACTTGCATAGAACAACGGAGAACTCAAACGATATCCATTACACCGATATTTGGGCGCAACGAGATGGACCAGATGCAGTTTCTCAAGAATCTTTAGAAACTTGCAATGAATCTGGAACATTGGAACAGCCGAAACTCGAGAAGGAAGAAAGTAATGTAAATATGGACAATGATCATCAAATGGAATTCCAAACAAGAAACTCTAGCTCATCAAATCCTTCACTGTCCTTTGTCAACGATCACGAGAACGAAATTCGACAAGAACTAAGATGGCTCAAGGCTAAATATCAAATGCAGTTGAGGGAGCTAAGGGATCAACAGTTAGGAGTCAAGACCAAATCTCTTAGCTTGCATCCAAATCCCAACCTTGTGGAGACCGACAATGGAGCTTCGGTATCTTTGCTTTCGCCAGACTTCAATGAAGCAGCAAAAAGTAAGCCTGCCCTAACATCTCTCTCCGTTAGCAAGAATATCACTTCACATTCCTTCTATGCTGCTGTTGGTAACATTATGGAAAACCAAACCTTCCAAGACGACAAAGTCGTTGTCGACGAGCCGAGTAGTCCCGAGCTGATGGTTGCTGCCAAGAGTTTCTATAGAAGAGCATTGTTTCCAAATTCTCTTCAAAGAGCAACCTCACTTCCTGTTGATGCTATAGACTTTTAG 2217 39.83 MNGSSTTNSEPDISEYVEVDPTGRYGRYNEVLGKGASKTVYRAFDEYDGIEVAWNQVKLCDFLQTPEDLERLYREIHLLKTLKHKNIMKFYSSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILKGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSYVARCVGTPEFMAPEIYEEEYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDLEVRYFVEKCLATVSTRLSARELLNDPFLQIDGCDSLLKPIEYYSEYDEVNNSLIRGGPFYGIPHGSLDNGYVNYFGHEAGNGLDYCPIDNEANEIDLFSCQEDEHLADVDITIKGRRRGDDDIFLRLRIADKEGRIRNIYFPFDLENDSALSVANEMVSELDITDQDVKKIADMIDGEIATLVPEWKRGKSSEETPNCTDSNVCHNCALNNSLLDYVSPNNPATKNLHILQCSQEHGCASIHGRFEEITYQVEGSDQFNGDENLHRTTENSNDIHYTDIWAQRDGPDAVSQESLETCNESGTLEQPKLEKEESNVNMDNDHQMEFQTRNSSSSNPSLSFVNDHENEIRQELRWLKAKYQMQLRELRDQQLGVKTKSLSLHPNPNLVETDNGASVSLLSPDFNEAAKSKPALTSLSVSKNITSHSFYAAVGNIMENQTFQDDKVVVDEPSSPELMVAAKSFYRRALFPNSLQRATSLPVDAIDF 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7000913 7003720 + CePI673135_06g006220.1 Cec06g0622 205359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0622 738 ProSiteProfiles Protein kinase domain profile. 26 283 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0622 738 FunFam probable serine/threonine-protein kinase WNK9 109 288 - -
Cec06g0622 738 CDD STKc_WNK 24 283 - -
Cec06g0622 738 SMART serkin_6 26 283 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0622 738 Gene3D - 377 465 - -
Cec06g0622 738 FunFam Probable serine/threonine-protein kinase WNK1 11 107 - -
Cec06g0622 738 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 623 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cec06g0622 738 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0622 738 Gene3D Phosphorylase Kinase; domain 1 11 107 - -
Cec06g0622 738 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 379 434 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
Cec06g0622 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g0622 738 SUPERFAMILY Protein kinase-like (PK-like) 20 284 IPR011009 -
Cec06g0622 738 Gene3D Transferase(Phosphotransferase) domain 1 109 288 - -
Cec06g0622 738 Coils Coil 603 623 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0074 Cec-Chr5:732156 Cec06g0622 Cec-Chr6:7000913 1.40E-127 dispersed
Cec06g0622 Cec-Chr6:7000913 Cec06g0999 Cec-Chr6:14618325 6.70E-183 dispersed
Cec02g2001 Cec-Chr2:37873036 Cec06g0622 Cec-Chr6:7000913 4.50E-135 transposed
Cec03g0303 Cec-Chr3:3450613 Cec06g0622 Cec-Chr6:7000913 2.30E-141 transposed
Cec04g0769 Cec-Chr4:27083098 Cec06g0622 Cec-Chr6:7000913 6.60E-120 transposed
Cec02g1719 Cec-Chr2:34930948 Cec06g0622 Cec-Chr6:7000913 1.20E-224 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72072 PF00069 Pkinase 4.30E-49 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0622 K08867 - csv:101210511 1356.27