Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0637 ATGGAATTGAGTATTGTTTTGGCAATGGTGGCCTTGTTATGGGCAGGAGAAGCAATGGCACAGTCGTCGGATTGTAGCAATGTGTTGATTAGCCTCTCGCCTTGCCTCAATTACATCACTGGCAACTCCTCCATGCCGTCGCCGAGCTGCTGCTCGCAGCTGTCCACCGTCGTCCGCTCGCAACCGCAGTGCCTTTGTCAAGTCCTCAATAACGGCGGCGGCGCCTCCGCGATTGGGGGACTCAATGTCAACCAAACTCTAGCTCTTGCTCTTCCTGGTGCTTGTCGTATTCAGACTCCGCCCATTACCCGTTGTAATGCTGCTTCTCCGACAAACGACATTCCAGCAGAAACACCAAAATCTCCAAGCGAGGAGCCTACAGAGAGAGGATCAAGAAGTGTGCCAACAACCACAGAAGATGGAACATCCAATGGAACTTCAACAATATTGTTGTCCAAAGCTATTGTCTTCATCTTCCTTCTTGCCGCAACTTTTGCTCCATTAATCCATTGA 513 50.29 MELSIVLAMVALLWAGEAMAQSSDCSNVLISLSPCLNYITGNSSMPSPSCCSQLSTVVRSQPQCLCQVLNNGGGASAIGGLNVNQTLALALPGACRIQTPPITRCNAASPTNDIPAETPKSPSEEPTERGSRSVPTTTEDGTSNGTSTILLSKAIVFIFLLAATFAPLIH 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7143682 7145695 - CePI673135_06g006370.1 Cec06g0637 205374

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0637 170 Pfam Probable lipid transfer 15 105 IPR016140 -
Cec06g0637 170 Gene3D - 22 103 IPR036312 -
Cec06g0637 170 CDD AAI_LTSS 32 97 - -
Cec06g0637 170 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 22 104 - -
Cec06g0637 170 SMART aai_6 25 105 IPR016140 -
Cec06g0637 170 MobiDBLite consensus disorder prediction 128 145 - -
Cec06g0637 170 MobiDBLite consensus disorder prediction 106 145 - -
Cec06g0637 170 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 13 146 IPR043325 -
Cec06g0637 170 PRINTS Plant phospholipid transfer protein signature 24 40 IPR000528 GO:0006869(InterPro)|GO:0008289(InterPro)
Cec06g0637 170 PRINTS Plant phospholipid transfer protein signature 45 59 IPR000528 GO:0006869(InterPro)|GO:0008289(InterPro)
Cec06g0637 170 PRINTS Plant phospholipid transfer protein signature 82 99 IPR000528 GO:0006869(InterPro)|GO:0008289(InterPro)
Cec06g0637 170 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 24 106 IPR036312 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0637 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0766 Cec-Chr4:27022104 Cec06g0637 Cec-Chr6:7143682 1.70E-06 dispersed
Cec05g0590 Cec-Chr5:4840062 Cec06g0637 Cec-Chr6:7143682 1.70E-33 wgd
Cec06g0637 Cec-Chr6:7143682 Cec07g0067 Cec-Chr7:676523 1.80E-19 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g528 . . . . . Bpe14g01197 . . . . . Cma14g01723 . Car14g01554 . Cpe08g00270 Cpe03g01446 . . . . . . . Cla06g00595 Cam06g0634 Cec06g0637 Cco06g0640 Clacu06g0620 Cmu06g0613 Cre06g1381 Cone14ag0860 Cone15ag0858 . . Lsi05g01618 . . . . . . . . . . . . Cmo06g01400 Cmo14g01762 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001192 1 2 1 1 1 3 3 3 3 3 3 3 3 3 3 3 3 4 3 3 2 2 1 2 3 3 3 2 3 4 77