Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0671 ATGGCTCGGGACGGGCATGTAGTGCCAGTGGATCCACAGACGGTGCTGACTGTGAAGAAGAAGAAACAGTCTTCTCGGAATTGGATTCTACTGGATTGTACGGGCCAAGGGACCGTCCTCGATGTCGACAAGCATGCTATTATGCATCGAGTTCAAATTCATGCTCGAGACCTTCGGATTCTTGATCCTTTGCTTTCTTATCCCTCCACGATTTTAGGGCGTGAGAGGGCCATTGTTCTTAATCTCGAGCATATAAAGGCGATCATTACTGCTGAAGAGGTTTTGCTTAGAGATCCGACAGATGAACATGTCATCCCTGTGGTTGAGGAGCTGCAGAGGCGACTGCCTCCTTCTAATGCCTTCCAGTTTCAAGTTCAAGGAGATGGTAAAGAGTATCAGGGCCAACATGATGACTCGCCATTTGAATTTCGTGCCCTTGAAGTTGCTTTGGAAGCCATATGTAGTTTTCTTGCTGCACGGACGACTGAACTGGAGACTGCTGCTTATCCTGCCTTGGATGAGCTTACTGCCAAGATTAGTAGCCGCAACTTGGACAGAGTTCGTAAATTGAAGAGTGCAATGACCAGGTTGACTGCGAGGGTTCAAAAGGTGAGAGATGAGCTTGAACAATTACTGGACGATGATGATGATATGGCAGACCTTTACTTGTCAAGAAAGATGAGTTCATCCTCTCCTGTAAGTGGTTCTGGTCCTGCCAATTGGTTTCCTGCCTCTCCTACAATTGGTTCAAAGATCTCAAGAGCAAGCAGAGCAAGTGTTGCAACTGTACGAGGGGATGAGGATGATATTGAGGAGCTTGAAATGTTACTGGAGGCTTACTTTATGCAGATTGATGGAACATTGAACAAATTAACTACACTGCGAGAATATATTGATGACACAGAAGATTATATTAATATCCAGCTTGACAATCACCGAAATCAACTCATTCAGTTGGAGCTCTTTTTAAGTTCTGGAACTGTTTGTTTGTCTATCTATTCTTTGGTGAGTGCAATATTCGGCATGAACATTCCATACACTTGGAATGACGATCACGGATACATGTTTAAATGGGTTGTCATTGTTTCTGGAGTGGCTTGTGCGGTGTTGTTTGTCACAATTATTTACTATGCTCGCTACAAAGGTTTGGTGGGATCTTGA 1161 44.27 MARDGHVVPVDPQTVLTVKKKKQSSRNWILLDCTGQGTVLDVDKHAIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITAEEVLLRDPTDEHVIPVVEELQRRLPPSNAFQFQVQGDGKEYQGQHDDSPFEFRALEVALEAICSFLAARTTELETAAYPALDELTAKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKMSSSSPVSGSGPANWFPASPTIGSKISRASRASVATVRGDEDDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVSAIFGMNIPYTWNDDHGYMFKWVVIVSGVACAVLFVTIIYYARYKGLVGS 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7578908 7583328 + CePI673135_06g006710.1 Cec06g0671 205408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0671 386 Gene3D - 14 99 - -
Cec06g0671 386 FunFam Magnesium transporter MRS2-1 16 99 - -
Cec06g0671 386 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 383 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cec06g0671 386 Pfam Magnesium transporter MRS2-like 40 229 - -
Cec06g0671 386 Pfam Magnesium transporter MRS2-like 266 313 - -
Cec06g0671 386 CDD Mrs2_Mfm1p-like 28 383 IPR039204 -
Cec06g0671 386 Coils Coil 187 214 - -
Cec06g0671 386 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 322 374 IPR045863 -
Cec06g0671 386 Gene3D Magnesium transport protein CorA, transmembrane region 104 316 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0026 Cec-Chr2:264750 Cec06g0671 Cec-Chr6:7578908 1.60E-75 transposed
Cec02g0743 Cec-Chr2:8076644 Cec06g0671 Cec-Chr6:7578908 6.70E-78 transposed
Cec05g1124 Cec-Chr5:10038779 Cec06g0671 Cec-Chr6:7578908 2.70E-86 transposed
Cec08g1072 Cec-Chr8:22578531 Cec06g0671 Cec-Chr6:7578908 1.10E-67 transposed
Cec10g1297 Cec-Chr10:27136508 Cec06g0671 Cec-Chr6:7578908 2.90E-88 transposed
Cec06g0671 Cec-Chr6:7578908 Cec07g0092 Cec-Chr7:953470 3.80E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0671 K16075 - csv:101203841 688.337