Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0671 | ATGGCTCGGGACGGGCATGTAGTGCCAGTGGATCCACAGACGGTGCTGACTGTGAAGAAGAAGAAACAGTCTTCTCGGAATTGGATTCTACTGGATTGTACGGGCCAAGGGACCGTCCTCGATGTCGACAAGCATGCTATTATGCATCGAGTTCAAATTCATGCTCGAGACCTTCGGATTCTTGATCCTTTGCTTTCTTATCCCTCCACGATTTTAGGGCGTGAGAGGGCCATTGTTCTTAATCTCGAGCATATAAAGGCGATCATTACTGCTGAAGAGGTTTTGCTTAGAGATCCGACAGATGAACATGTCATCCCTGTGGTTGAGGAGCTGCAGAGGCGACTGCCTCCTTCTAATGCCTTCCAGTTTCAAGTTCAAGGAGATGGTAAAGAGTATCAGGGCCAACATGATGACTCGCCATTTGAATTTCGTGCCCTTGAAGTTGCTTTGGAAGCCATATGTAGTTTTCTTGCTGCACGGACGACTGAACTGGAGACTGCTGCTTATCCTGCCTTGGATGAGCTTACTGCCAAGATTAGTAGCCGCAACTTGGACAGAGTTCGTAAATTGAAGAGTGCAATGACCAGGTTGACTGCGAGGGTTCAAAAGGTGAGAGATGAGCTTGAACAATTACTGGACGATGATGATGATATGGCAGACCTTTACTTGTCAAGAAAGATGAGTTCATCCTCTCCTGTAAGTGGTTCTGGTCCTGCCAATTGGTTTCCTGCCTCTCCTACAATTGGTTCAAAGATCTCAAGAGCAAGCAGAGCAAGTGTTGCAACTGTACGAGGGGATGAGGATGATATTGAGGAGCTTGAAATGTTACTGGAGGCTTACTTTATGCAGATTGATGGAACATTGAACAAATTAACTACACTGCGAGAATATATTGATGACACAGAAGATTATATTAATATCCAGCTTGACAATCACCGAAATCAACTCATTCAGTTGGAGCTCTTTTTAAGTTCTGGAACTGTTTGTTTGTCTATCTATTCTTTGGTGAGTGCAATATTCGGCATGAACATTCCATACACTTGGAATGACGATCACGGATACATGTTTAAATGGGTTGTCATTGTTTCTGGAGTGGCTTGTGCGGTGTTGTTTGTCACAATTATTTACTATGCTCGCTACAAAGGTTTGGTGGGATCTTGA | 1161 | 44.27 | MARDGHVVPVDPQTVLTVKKKKQSSRNWILLDCTGQGTVLDVDKHAIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITAEEVLLRDPTDEHVIPVVEELQRRLPPSNAFQFQVQGDGKEYQGQHDDSPFEFRALEVALEAICSFLAARTTELETAAYPALDELTAKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKMSSSSPVSGSGPANWFPASPTIGSKISRASRASVATVRGDEDDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVSAIFGMNIPYTWNDDHGYMFKWVVIVSGVACAVLFVTIIYYARYKGLVGS | 386 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 7578908 | 7583328 | + | CePI673135_06g006710.1 | Cec06g0671 | 205408 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0671 | 386 | Gene3D | - | 14 | 99 | - | - | |
Cec06g0671 | 386 | FunFam | Magnesium transporter MRS2-1 | 16 | 99 | - | - | |
Cec06g0671 | 386 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 13 | 383 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
Cec06g0671 | 386 | Pfam | Magnesium transporter MRS2-like | 40 | 229 | - | - | |
Cec06g0671 | 386 | Pfam | Magnesium transporter MRS2-like | 266 | 313 | - | - | |
Cec06g0671 | 386 | CDD | Mrs2_Mfm1p-like | 28 | 383 | IPR039204 | - | |
Cec06g0671 | 386 | Coils | Coil | 187 | 214 | - | - | |
Cec06g0671 | 386 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 322 | 374 | IPR045863 | - | |
Cec06g0671 | 386 | Gene3D | Magnesium transport protein CorA, transmembrane region | 104 | 316 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0026 | Cec-Chr2:264750 | Cec06g0671 | Cec-Chr6:7578908 | 1.60E-75 | transposed | |
Cec02g0743 | Cec-Chr2:8076644 | Cec06g0671 | Cec-Chr6:7578908 | 6.70E-78 | transposed | |
Cec05g1124 | Cec-Chr5:10038779 | Cec06g0671 | Cec-Chr6:7578908 | 2.70E-86 | transposed | |
Cec08g1072 | Cec-Chr8:22578531 | Cec06g0671 | Cec-Chr6:7578908 | 1.10E-67 | transposed | |
Cec10g1297 | Cec-Chr10:27136508 | Cec06g0671 | Cec-Chr6:7578908 | 2.90E-88 | transposed | |
Cec06g0671 | Cec-Chr6:7578908 | Cec07g0092 | Cec-Chr7:953470 | 3.80E-145 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0671 | K16075 | - | csv:101203841 | 688.337 |