Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0693 ATGCAACTTTTTAAATCCACGATTATTATAAGTCCCTGGTGGGCCAGTCGGTTTGGCTTTCCGGCCACCGGCCCAATATCAACCACCGTTGACGGCAGTGGAAGAGATCATGACGACGACGAAGACGAGCCAAACGGAGGCGGCGTGGTGGTCGGAAACCGCCGATCGAGAGGACGGCCACCGGGATCGAAAAGCAAACCAAAATCTCCAATCATCGTCACGCGCGACAACCCTCACGCGCTTCGCACGCACGTGATCGAGATTGTCGGAGGAGCAGACGTCGCCGGCAGCATAAAGCAATTCTCCTGCCGCCGACAACGTGGGGTTTGTGTTCTCAGTGGCAGCGGTACGGTTGTGGACGTAACTCTCCGGCAATCCGCCGGTTCTGCCGCCGTGATCCAACTTCACGGCATGTTCGATATTCTATCTCTAAGTGGGTCTTTTCTTCCCGGTCGAGCCCCTCCCTGTTCGAACGGGCTGACCGTGTACTTGTCGGGCGGTGAGGGGCAGGTGATTGGAGGGACGGTGGTGGGCCCATTGTTGGCAGCTGGGCCTATAATTTTGATAGCTGCTACTTTTGCTAGTGCTACTTATGAGAGATTGCCTTTACAAGACGACCATAATAATCAAGAAAGAGAGATTTCTCCGGCCACCACGGGCGGCGGAGAAGTGGAGGAGCCGCCGCAGTTTACTCGGATGGCAACTTCAATTTACGACTTGATGTCACCAAATAATCATGATGGAGTTGATGGGTATGGTTGGGCTCATGAAAGACCATCTTTTGTTTAA 789 53.74 MQLFKSTIIISPWWASRFGFPATGPISTTVDGSGRDHDDDEDEPNGGGVVVGNRRSRGRPPGSKSKPKSPIIVTRDNPHALRTHVIEIVGGADVAGSIKQFSCRRQRGVCVLSGSGTVVDVTLRQSAGSAAVIQLHGMFDILSLSGSFLPGRAPPCSNGLTVYLSGGEGQVIGGTVVGPLLAAGPIILIAATFASATYERLPLQDDHNNQEREISPATTGGGEVEEPPQFTRMATSIYDLMSPNNHDGVDGYGWAHERPSFV 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7862803 7863968 - CePI673135_06g006930.1 Cec06g0693 205430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0693 262 Gene3D - 81 212 - -
Cec06g0693 262 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 37 216 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cec06g0693 262 Pfam Plants and Prokaryotes Conserved (PCC) domain 82 193 IPR005175 -
Cec06g0693 262 MobiDBLite consensus disorder prediction 203 227 - -
Cec06g0693 262 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 206 - -
Cec06g0693 262 CDD DUF296 82 193 IPR005175 -
Cec06g0693 262 MobiDBLite consensus disorder prediction 26 72 - -
Cec06g0693 262 ProSiteProfiles PPC domain profile profile. 78 217 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0693 Cec-Chr6:7862803 Cec07g0387 Cec-Chr7:3952144 3.00E-53 dispersed
Cec02g1771 Cec-Chr2:35542995 Cec06g0693 Cec-Chr6:7862803 5.00E-57 wgd
Cec05g0521 Cec-Chr5:4157903 Cec06g0693 Cec-Chr6:7862803 4.40E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0693 - - - 0.0