Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0728 ATGAAGACAGAGTGTTCCTCTTCTTCACTGCTGCTTCTTCTTCACCCGAAATCGCGGGCCGTACATTTCCTTACTCTCTTCTCTAGGGTTTCGCTTCGCTTCGCTCCGCTTCTCATTGCTGTCCTGCTGTTTTTTCTCGGACAAGTTGTACGGTTCATTATCCGATCTACGAGGTCGGATGTGTCTACTGCTCTCACTAATGACCTCTCTTATTTTAGTGAACCGGACGTTCTGGATTGGCCATCCGACCGAAAATCACATTATCTAACCTACTGGAGACGTACTGCTCAGTATATGTATATTTGCCGTACCACAACGTACTGGGCGAACTATGTCATGTGTTGGTTTAATAAGTTTAGATCCAAAGACAAGCCAAAGCCCTCAACAAATAAGGAGAGTACAGGCAATGCAAGAGATGCATCAAGAGCACCAACCAGTGAAGATGTACCCTCAAATGTGACCAAGCAGAAGGTTGCAGCTGCCAAGCAGTACATAGAAAACCATTACAAGAAGCAAATGAAGAGCTTGGAAGAAAGGAGGGAGAGACGCCATGTACTGGAAAAGAAGTTGGCTGATGCTGAGGTCTCTCAGGAAGAGCAAAGCAACCTGCTCAAGCATCTAGAGAAGAAGGAAACAGAGTATATGCGTCTTCAAAGGCATAAAATGGGTGCTGATGATTTTGAGCCACTAACAATGATAGGGAGGGGTGCTTTTGGAGAGGTTAGAGTTTGTCGGGAGAAAGCAACTGGCCATGTATATGCCATGAAGAAGCTTAAGAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAACACGTGAAAGCTGAAAGGAATCTATTGGCGGAGGTTGACAGTAATTGTATTGTAAAGCTGTACTGCTCTTTCCAAGATGAAGAGTATTTATATCTTATTATGGAATACTTACCTGGTGGAGATATGATGACTTTGCTGATGAGGAAAGATACTCTAACCGAAGACGAGGCTCAGTTTTATGTTGGTGAAACAGTTTTAGCTATCGAGTCAATCCATAAACATAATTATATTCATAGAGATATCAAGCCGGATAACTTACTTCTTGACAAGGACGGCCATATGAAATTATCAGATTTTGGATTATGTAAACCATTAGATTGTAGTAACCTCCAAGAAAAGGATTTTTCCCAGGGAAGTAACCTCAGTGGTGCTCTTCAAAGTGATGGGCGTCCTGTGGCATCAAAACGCACACAACAGGAACAACTGCAGCATTGGCAAAGGAATAGGCGGATGCTTGCTTATTCAACAGTTGGAACTCCTGATTATATTGCCCCGGAAGTTTTGTTGAAGAAAGGATATGGAATGGAATGTGATTGGTGGTCACTTGGTGCCATCATGTACGAAATGCTTGTGGGATTCCCACCGTTTTACTCAGATGAGCCAATGTCAACTTGCAGGAAGATAGTTAATTGGAGAACTCATTTGAAATTTCCAGAAGAAGCAAAGCTCTCTCCAGAAGCGAAGGATCTAATTAGTAAACTCTTATGCAATGTTGAACAAAGGCTTGGGACCAAGGGTGCAGATGAAATAAAGGCACACCCGTGGTTCAAGGGCATTGAGTGGGATAAGTTGTATCAAATGAAAGCTGCATTTATTCCTGAGGTCAATGATGAATTGGATACTCAAAACTTTGAGAAGTTTGAAGAGACTGAAAACGCAATTCAAACTTCATCAAAATCAGGTCCATGGAGAAAGATGTTGTCATCGAAGGATATCAATTTTGTTGGTTATACATACAAAAACTTTGAAATCATTGATGATAATCAATTGCCTGGAATCGCTGAACTGAAGAAGAAGACCGCAAAATCTAAAAGACCTTCCATCAAATCACTTTTTGATAACGAATCTGCAATGGCTAATCAACCTGTTCAAGGAAGCTTTCTGAAACTCTTGCCTCCCCAACTAGAAGTCCCTGAGAAACCGATGAGCGCCAATGAGAAGCATTCATAA 1980 41.97 MKTECSSSSLLLLLHPKSRAVHFLTLFSRVSLRFAPLLIAVLLFFLGQVVRFIIRSTRSDVSTALTNDLSYFSEPDVLDWPSDRKSHYLTYWRRTAQYMYICRTTTYWANYVMCWFNKFRSKDKPKPSTNKESTGNARDASRAPTSEDVPSNVTKQKVAAAKQYIENHYKKQMKSLEERRERRHVLEKKLADAEVSQEEQSNLLKHLEKKETEYMRLQRHKMGADDFEPLTMIGRGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEAQFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKDGHMKLSDFGLCKPLDCSNLQEKDFSQGSNLSGALQSDGRPVASKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEETENAIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIIDDNQLPGIAELKKKTAKSKRPSIKSLFDNESAMANQPVQGSFLKLLPPQLEVPEKPMSANEKHS 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8430571 8438086 + CePI673135_06g007280.1 Cec06g0728 205465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0728 659 MobiDBLite consensus disorder prediction 130 155 - -
Cec06g0728 659 Coils Coil 176 210 - -
Cec06g0728 659 Pfam Protein kinase C terminal domain 545 589 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0728 659 ProSiteProfiles Protein kinase domain profile. 227 526 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0728 659 CDD MobB_NDR_LATS-like 161 222 - -
Cec06g0728 659 Gene3D Transferase(Phosphotransferase) domain 1 311 377 - -
Cec06g0728 659 SUPERFAMILY Protein kinase-like (PK-like) 202 579 IPR011009 -
Cec06g0728 659 ProSiteProfiles AGC-kinase C-terminal domain profile. 527 599 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0728 659 FunFam Non-specific serine/threonine protein kinase 198 310 - -
Cec06g0728 659 Gene3D Transferase(Phosphotransferase) domain 1 425 544 - -
Cec06g0728 659 FunFam Non-specific serine/threonine protein kinase 425 544 - -
Cec06g0728 659 Gene3D Phosphorylase Kinase; domain 1 225 310 - -
Cec06g0728 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g0728 659 Gene3D Phosphorylase Kinase; domain 1 545 555 - -
Cec06g0728 659 SMART pkinase_C_6 527 591 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0728 659 MobiDBLite consensus disorder prediction 123 155 - -
Cec06g0728 659 FunFam Non-specific serine/threonine protein kinase 311 378 - -
Cec06g0728 659 SMART serkin_6 227 526 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0728 659 ProSitePatterns Protein kinases ATP-binding region signature. 233 256 IPR017441 GO:0005524(InterPro)
Cec06g0728 659 PANTHER SERINE/THREONINE-PROTEIN KINASE 132 593 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cec06g0728 659 CDD STKc_NDR_like 225 590 - -
Cec06g0728 659 Pfam Protein kinase domain 229 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0728 659 Pfam Protein kinase domain 423 526 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g2253 Cec-Chr4:40163024 Cec06g0728 Cec-Chr6:8430571 1.20E-221 dispersed
Cec05g1987 Cec-Chr5:31886686 Cec06g0728 Cec-Chr6:8430571 3.50E-183 dispersed
Cec06g0728 Cec-Chr6:8430571 Cec09g0776 Cec-Chr9:7105483 1.10E-242 dispersed
Cec06g0728 Cec-Chr6:8430571 Cec03g1597 Cec-Chr3:34064320 1.80E-184 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72075 PF00069 Pkinase 2.20E-65 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0728 K08790 - csv:101205120 1093.18