Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0728 | ATGAAGACAGAGTGTTCCTCTTCTTCACTGCTGCTTCTTCTTCACCCGAAATCGCGGGCCGTACATTTCCTTACTCTCTTCTCTAGGGTTTCGCTTCGCTTCGCTCCGCTTCTCATTGCTGTCCTGCTGTTTTTTCTCGGACAAGTTGTACGGTTCATTATCCGATCTACGAGGTCGGATGTGTCTACTGCTCTCACTAATGACCTCTCTTATTTTAGTGAACCGGACGTTCTGGATTGGCCATCCGACCGAAAATCACATTATCTAACCTACTGGAGACGTACTGCTCAGTATATGTATATTTGCCGTACCACAACGTACTGGGCGAACTATGTCATGTGTTGGTTTAATAAGTTTAGATCCAAAGACAAGCCAAAGCCCTCAACAAATAAGGAGAGTACAGGCAATGCAAGAGATGCATCAAGAGCACCAACCAGTGAAGATGTACCCTCAAATGTGACCAAGCAGAAGGTTGCAGCTGCCAAGCAGTACATAGAAAACCATTACAAGAAGCAAATGAAGAGCTTGGAAGAAAGGAGGGAGAGACGCCATGTACTGGAAAAGAAGTTGGCTGATGCTGAGGTCTCTCAGGAAGAGCAAAGCAACCTGCTCAAGCATCTAGAGAAGAAGGAAACAGAGTATATGCGTCTTCAAAGGCATAAAATGGGTGCTGATGATTTTGAGCCACTAACAATGATAGGGAGGGGTGCTTTTGGAGAGGTTAGAGTTTGTCGGGAGAAAGCAACTGGCCATGTATATGCCATGAAGAAGCTTAAGAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAACACGTGAAAGCTGAAAGGAATCTATTGGCGGAGGTTGACAGTAATTGTATTGTAAAGCTGTACTGCTCTTTCCAAGATGAAGAGTATTTATATCTTATTATGGAATACTTACCTGGTGGAGATATGATGACTTTGCTGATGAGGAAAGATACTCTAACCGAAGACGAGGCTCAGTTTTATGTTGGTGAAACAGTTTTAGCTATCGAGTCAATCCATAAACATAATTATATTCATAGAGATATCAAGCCGGATAACTTACTTCTTGACAAGGACGGCCATATGAAATTATCAGATTTTGGATTATGTAAACCATTAGATTGTAGTAACCTCCAAGAAAAGGATTTTTCCCAGGGAAGTAACCTCAGTGGTGCTCTTCAAAGTGATGGGCGTCCTGTGGCATCAAAACGCACACAACAGGAACAACTGCAGCATTGGCAAAGGAATAGGCGGATGCTTGCTTATTCAACAGTTGGAACTCCTGATTATATTGCCCCGGAAGTTTTGTTGAAGAAAGGATATGGAATGGAATGTGATTGGTGGTCACTTGGTGCCATCATGTACGAAATGCTTGTGGGATTCCCACCGTTTTACTCAGATGAGCCAATGTCAACTTGCAGGAAGATAGTTAATTGGAGAACTCATTTGAAATTTCCAGAAGAAGCAAAGCTCTCTCCAGAAGCGAAGGATCTAATTAGTAAACTCTTATGCAATGTTGAACAAAGGCTTGGGACCAAGGGTGCAGATGAAATAAAGGCACACCCGTGGTTCAAGGGCATTGAGTGGGATAAGTTGTATCAAATGAAAGCTGCATTTATTCCTGAGGTCAATGATGAATTGGATACTCAAAACTTTGAGAAGTTTGAAGAGACTGAAAACGCAATTCAAACTTCATCAAAATCAGGTCCATGGAGAAAGATGTTGTCATCGAAGGATATCAATTTTGTTGGTTATACATACAAAAACTTTGAAATCATTGATGATAATCAATTGCCTGGAATCGCTGAACTGAAGAAGAAGACCGCAAAATCTAAAAGACCTTCCATCAAATCACTTTTTGATAACGAATCTGCAATGGCTAATCAACCTGTTCAAGGAAGCTTTCTGAAACTCTTGCCTCCCCAACTAGAAGTCCCTGAGAAACCGATGAGCGCCAATGAGAAGCATTCATAA | 1980 | 41.97 | MKTECSSSSLLLLLHPKSRAVHFLTLFSRVSLRFAPLLIAVLLFFLGQVVRFIIRSTRSDVSTALTNDLSYFSEPDVLDWPSDRKSHYLTYWRRTAQYMYICRTTTYWANYVMCWFNKFRSKDKPKPSTNKESTGNARDASRAPTSEDVPSNVTKQKVAAAKQYIENHYKKQMKSLEERRERRHVLEKKLADAEVSQEEQSNLLKHLEKKETEYMRLQRHKMGADDFEPLTMIGRGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEAQFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKDGHMKLSDFGLCKPLDCSNLQEKDFSQGSNLSGALQSDGRPVASKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEETENAIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIIDDNQLPGIAELKKKTAKSKRPSIKSLFDNESAMANQPVQGSFLKLLPPQLEVPEKPMSANEKHS | 659 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 8430571 | 8438086 | + | CePI673135_06g007280.1 | Cec06g0728 | 205465 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0728 | 659 | MobiDBLite | consensus disorder prediction | 130 | 155 | - | - | |
Cec06g0728 | 659 | Coils | Coil | 176 | 210 | - | - | |
Cec06g0728 | 659 | Pfam | Protein kinase C terminal domain | 545 | 589 | IPR017892 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0728 | 659 | ProSiteProfiles | Protein kinase domain profile. | 227 | 526 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0728 | 659 | CDD | MobB_NDR_LATS-like | 161 | 222 | - | - | |
Cec06g0728 | 659 | Gene3D | Transferase(Phosphotransferase) domain 1 | 311 | 377 | - | - | |
Cec06g0728 | 659 | SUPERFAMILY | Protein kinase-like (PK-like) | 202 | 579 | IPR011009 | - | |
Cec06g0728 | 659 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 527 | 599 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0728 | 659 | FunFam | Non-specific serine/threonine protein kinase | 198 | 310 | - | - | |
Cec06g0728 | 659 | Gene3D | Transferase(Phosphotransferase) domain 1 | 425 | 544 | - | - | |
Cec06g0728 | 659 | FunFam | Non-specific serine/threonine protein kinase | 425 | 544 | - | - | |
Cec06g0728 | 659 | Gene3D | Phosphorylase Kinase; domain 1 | 225 | 310 | - | - | |
Cec06g0728 | 659 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 346 | 358 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec06g0728 | 659 | Gene3D | Phosphorylase Kinase; domain 1 | 545 | 555 | - | - | |
Cec06g0728 | 659 | SMART | pkinase_C_6 | 527 | 591 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0728 | 659 | MobiDBLite | consensus disorder prediction | 123 | 155 | - | - | |
Cec06g0728 | 659 | FunFam | Non-specific serine/threonine protein kinase | 311 | 378 | - | - | |
Cec06g0728 | 659 | SMART | serkin_6 | 227 | 526 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0728 | 659 | ProSitePatterns | Protein kinases ATP-binding region signature. | 233 | 256 | IPR017441 | GO:0005524(InterPro) | |
Cec06g0728 | 659 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 132 | 593 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
Cec06g0728 | 659 | CDD | STKc_NDR_like | 225 | 590 | - | - | |
Cec06g0728 | 659 | Pfam | Protein kinase domain | 229 | 378 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0728 | 659 | Pfam | Protein kinase domain | 423 | 526 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g2253 | Cec-Chr4:40163024 | Cec06g0728 | Cec-Chr6:8430571 | 1.20E-221 | dispersed | |
Cec05g1987 | Cec-Chr5:31886686 | Cec06g0728 | Cec-Chr6:8430571 | 3.50E-183 | dispersed | |
Cec06g0728 | Cec-Chr6:8430571 | Cec09g0776 | Cec-Chr9:7105483 | 1.10E-242 | dispersed | |
Cec06g0728 | Cec-Chr6:8430571 | Cec03g1597 | Cec-Chr3:34064320 | 1.80E-184 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72075 | PF00069 | Pkinase | 2.20E-65 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0728 | K08790 | - | csv:101205120 | 1093.18 |