Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0779 ATGGCGGCTACAGATTGCTCCCTGACTCTAGCTCAGCTCCTCGGCCCCAATGTCACCAACTCCGGCGCCGCCGCCTCCTTCATTTGCGACCAATTCTCCACCTCCACCAACAACTTTTCCGACACCAAATTCGCCGTCGACACCGTTTACCTCCTCTTCTCCGCCTACCTCGTCTTCTCCATGCAGCTCGGCTTCGCCATGCTCTGTGCCGGCTCCGTCCGCGCCAAAAACACCATGAACATCATGCTCACCAATGTCCTCGACGCTGCTGCCGGCGGCCTTTTCTACTACCTCTTCGGCTTCGCCTTCGCCTTCGGCACCCCTTCCAACCCCTTCATCGGCCGCCATTTCTTTGGCCTCAAGTCAATCCCTTCCACCGCCGCCGATTACAGCTTCTTTCTCTATCAATGGGCTTTCGCCATCGCTGCCGCCGGTATCACCAGCGGCTCAATTGCCGAGCGAACCCAATTTGTTGCCTATTTGATCTACTCCTCCGTTTTGACCGGTTTCGTTTATCCGGTCGTGTCCCATTGGTTCTGGTCTCCAGACGGTTGGGCCAGCCCGTCACGGTCCAACGGTGACCTCTTGTTTGGAACTGGAGTCATAGATTTCGCCGGTTCCGGCGTGGTTCACATGGTCGGTGGAATCGCTGGACTTTGGGGAGCTTTAATAGAAGGACCACGAATCGGCCGGTTCGACAGAAGCGGCAGATCCGTTGCTCTACGAGGCCATAGCGCTACGTTAGTTGTTCTCGGTACCTTCATGCTTTGGTTCGGTTGGTACGGGTTCAACCCCGGTTCCTTCACTAAAATCTTAGTTCCGTATGGTTCGAATAATTACTACGGACAGTGGAGTGCCGTCGGTCGAACCGCCGTGACGACGACACTTGCCGGTTGCACGGCTGCGCTAACAACGCTTTTCGGAAAACGAATTCTATCCGGCCACTGGAACGTTACCGACGTCTGCAATGGCTTACTTGGCGGCTTTGCCGCCATAACCTCTGGCTGCTCGGTGGTGGAGCCGTGGGCCGCTGTGATATGTGGGTTTGTGGCGGCGGTGGTTTTAATCAGCTGTAACAAACTGGCAGAGAAGGTGAAATTTGACGACCCATTGGAGGCGGCACAACTGCACGGCGGTTGCGGAGCGTGGGGGATAATTTTCACGGCGTTGTTCGCGACGAAGAAGTATGTGAACGAGGTGTACGGCGGAGATATGGGACGGCCACACGGGCTGTTTATGGGCGGCGGAGGGAAGTTGTTGGGTGCGCATTTGATACAAATTTTGGTGATTGTTGGGTGGGTTAGCGTTACAATGGGGCCGTTGTTTTTCGGGCTACATAAGCTGAAGCTATTAAGAATCTCGCCGGAGGATGAGATGGCCGGAATGGATATGACCAGACACGGTGGATTTGCTTACGTCTACCATGATGAAGATGAATCTCCGACCAATGGAGTTCAAATGAGTAAGATTAAGCCAAGAGAAACAAGTCCAATTGGAAATTAA 1503 54.22 MAATDCSLTLAQLLGPNVTNSGAAASFICDQFSTSTNNFSDTKFAVDTVYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNPFIGRHFFGLKSIPSTAADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGFVYPVVSHWFWSPDGWASPSRSNGDLLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRSVALRGHSATLVVLGTFMLWFGWYGFNPGSFTKILVPYGSNNYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAVICGFVAAVVLISCNKLAEKVKFDDPLEAAQLHGGCGAWGIIFTALFATKKYVNEVYGGDMGRPHGLFMGGGGKLLGAHLIQILVIVGWVSVTMGPLFFGLHKLKLLRISPEDEMAGMDMTRHGGFAYVYHDEDESPTNGVQMSKIKPRETSPIGN 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9167682 9169184 - CePI673135_06g007790.1 Cec06g0779 205516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0779 500 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Cec06g0779 500 SUPERFAMILY Ammonium transporter 46 453 - -
Cec06g0779 500 NCBIfam ammonium transporter 47 472 IPR001905 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Cec06g0779 500 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Cec06g0779 500 Gene3D Ammonium transporter AmtB like domains 26 491 IPR029020 -
Cec06g0779 500 PANTHER AMMONIUM TRANSPORTER 23 480 - GO:0005887(PANTHER)|GO:0008519(PANTHER)|GO:0072488(PANTHER)|GO:0097272(PANTHER)
Cec06g0779 500 MobiDBLite consensus disorder prediction 478 500 - -
Cec06g0779 500 FunFam Ammonium transporter 28 487 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0779 Cec-Chr6:9167682 Cec11g1057 Cec-Chr11:19959240 9.00E-208 dispersed
Cec06g0779 Cec-Chr6:9167682 Cec05g0438 Cec-Chr5:3574430 1.20E-239 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0779 K03320 - csv:101212168 950.273