Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0810 ATGTGGATTGTTCGTGGGATTTTTGTGGGATTGATTTTGATGATGATAATATTTGTAAGAGGAAATGAAGGTCAATCTTATAAAAGAGTTGGAGTGAAGAAATTGGCATGGAAGACTGTGGTTGTTGACCAGAATGGCCATGGAAATTTCTCTACCATTCAAGCTGCCATTGATTCTGTTCCTTCTAATAATAGGTTTTGGATCTCCATTCATGTTAACCCTGGTGTTTATAGAGAGAAGGTGAAAATCCCATATGATAAACCATATATAATTTTGAAAGGACAAAGAAAAAGAACAACAAAGGTTGTTTGGGACGACCATCTCACTGTTGCTCAGAGCCCTACTTTCACTTCTTCAGCTGATAATATTGTCGTCAAATCCATCACTTTTGTGAATTCTTACAACTATCCATGGAAGAATGGAAATCCAAGAGTTCCAGCAGTAGCAGCAATGATTACAGGCGACAAGTCGTCTTTCTATAGATGTGGTTTCTATGGAGTTCAGGACACATTATGGGATGATCAAGGACGACATTACTATCATCGTTGCAGCATTCAAGGAGCTGTCGACTTTATTTTTGGAGCTGCCCAATCCATTTTTCAGGGGTGTTCAATATCAGTGGTTGGAGAAGCACTTCTTCCATTAGGGTCCACAAGCTTCATAACAGCACAAGGAAGAACCAACCCAAATGATGCAAATGGTTTTGTTTTCAAAGAATGCAAGGTGTTTGGGAGTGGCTCAGCCTTCTTAGGAAGGCCATGGAGAGGCTACTCAAGAGTTATCTTTTACAACTCCAACTTCTCCAACATTATAAACCCTTATGGTTGGGATCCTTGGCATTTTGTTGGTCAAGAGAACCAACTTACCTATGCAGAAAATGGGTGTTACGGACCAGGTGCTGACATGTCGCATCGAGTAAAATGGGAAAAGAAGCTCAATTTGAATGAAATACGACGACTCACTAGCATGAGTTTTATCGACACTGAAGGTTGGATCCAAAACCAACCTTGGTAA 1014 40.24 MWIVRGIFVGLILMMIIFVRGNEGQSYKRVGVKKLAWKTVVVDQNGHGNFSTIQAAIDSVPSNNRFWISIHVNPGVYREKVKIPYDKPYIILKGQRKRTTKVVWDDHLTVAQSPTFTSSADNIVVKSITFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDDQGRHYYHRCSIQGAVDFIFGAAQSIFQGCSISVVGEALLPLGSTSFITAQGRTNPNDANGFVFKECKVFGSGSAFLGRPWRGYSRVIFYNSNFSNIINPYGWDPWHFVGQENQLTYAENGCYGPGADMSHRVKWEKKLNLNEIRRLTSMSFIDTEGWIQNQPW 337
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 9978444 9983376 + CePI673135_06g008100.1 Cec06g0810 205547
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0810 337 Gene3D - 35 336 IPR012334 -
Cec06g0810 337 FunFam Pectinesterase 34 336 - -
Cec06g0810 337 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 28 334 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Cec06g0810 337 Pfam Pectinesterase 40 328 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cec06g0810 337 ProSitePatterns Pectinesterase signature 2. 185 194 IPR033131 -
Cec06g0810 337 SUPERFAMILY Pectin lyase-like 38 334 IPR011050 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0784 Cec-Chr5:6491144 Cec06g0810 Cec-Chr6:9978444 3.90E-64 dispersed
Cec06g0810 Cec-Chr6:9978444 Cec10g1165 Cec-Chr10:25439388 1.00E-85 dispersed
Cec06g0810 Cec-Chr6:9978444 Cec08g1540 Cec-Chr8:27075787 2.90E-61 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0810 - - - 0.0