Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0880 ATGAGGACTGAAAACCGAAAGAGGAAGCTGCGGCTAAGCAAGATCTATTCATTTGCTTGTGGAAAAGCATCATTGAGAGATGAAGATCATTCACAAATTGGGAGGCCCGGATTCTCCCGGGTGGTTTTCTGTAATGATCCTGATTGTTTGGAGGCTGGAATGCGTAATTATGTTAATAATTCCATCAGGTCTACAAAGTATACACCCATCAATTTTTTGCCCAAGTCCTTGTTTGAGCAGTTTAGGAGGGTGGCTAATTTTTACTTCTTGATTGCTGGAATACTAGCCTTCACTCCTCTTGCTCCTTTTACTGCCGTCAGTGCAATTATCCCTCTTATTGCAGTCATTATCGCGACAATGGTTAAAGAAGGTATTGAAGATTGGCGACGACAGGCACAGGATATTGAGGTGAATAATAGAAAGGTTAAGGTTCATCAAGGCAATGGAGTCTTTGACCTTACTGAATGGAAAACTTTGAGGGTCGGAGATATAGTGAAGGTTGGAAAGGATCAATACTTTCCAGCCGACCTTCTTTTAATTTCGTCATGCTATGAGGATGGAATCTGTTACGTAGAAACGATGAACCTTGATGGGGAAACAAATCTGAAGGTAAAGCAAGCATTGGATGCAACTGCATTTGCAAATGAGGATTCTAACTTCCGTGATTTTAAGGCTACAATCAAATGTGAAGACCCAAATGCAAATCTTTATACCTTTGTTGGAAGCATGGACTTTGAAGAGCAACAATATCCACTTTCTCCTCAAAATCTTCTCCTGAGGGACTCCAAACTCCGAAACACGGAATATATATACGGGGTTGTTGTCTTTACTGGTCAAGATTCAAAGGTTATTCAAAATTCTACTGATCCACCTTCCAAGAGAAGCAAAGTTGAGAAGAAGATGGATAAAATCATATATCTGCTGTTAAGCATTCTATTCGTGCTGGCATTTATTGGTTCTATAGTCTTTGGTGTCGTGACTAAAGATGATCTGAAAAATGGGAGGACAAAGAGATGGTATCTTAGACCAGATGATTCTACTATTTTCTTTGATCCCAATAATGCACCAGCTGCTGCAATTTTTCACTTTCTGACTGCACTGATGTTGTATAACTACTTTATCCCTATATCCTTGTATGTGTCTATTGAAATTGTCAAAGTTCTTCAGAGTATCTTCATCAATCAAGACATTCATATGTACTATGAAGAAGCTGACAAACCAGCACATGCCCGCACCTCCAATTTGAATGAGGAACTTGGTCAAGTTGATACTATACTCTCTGACAAGACTGGCACTTTGACCTGTAACTCAATGGAGTTTATCAAGTGTTCTGTGGCTGGAACAGCTTATGGCAGTGGTGTCACTGAAACTGAGAGAGCTATGGAAGGCAGAAATAGTATGCCAATGCTTAATGGCAATGGCATTGGAAATATCCATAAGAGCAATGCGGATGCTTCAGATACAAATCCCTCTGTCAAAGGCTTTAATTTTAAGGACAAAAGGATTATGAACGGAAACTGGGTTAATGAACCTCATGCAGATGTCATCCAGAAGTTCTTCAGCCTCCTTGCAACTTGTCATACAGCTATTCCCGATGTGGATGAAAACACGGGAAAGGTTTCATATGAAGCTGAATCGCCAGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAATTGGTTTTGAATTCTACCAGAGGACACAGACAAGTATATCTATTCGTGAATTGGATCCTAGGTCTGGAAGGAAGGTCAAAAGGTCATATAAGCTTTTAAATGTTTTGGAGTTTAATAGTGCCCGAAAGAGGATGTCTGTCATAATTAGAGATGAAGAAGGGAAAGTGCTATTACTATGCAAAGGTGCTGACAGCGTCATGTTTGAGAGGCTTGCGAAGAATGCTAGAGAATTTGAAGAGAAAACGAAGGAGCATATCAATGAATATGCCGATGCAGGCCTACGGACCTTGTTACTTGCTTATCGTGAACTTGATGAGGAGGAATACAAGGAATTTGATAGGAAATTCTATGAAGCACAGAATTCAGTTAGTGCAGAGAGGGAGGCAATGATTGATAAAGTAACAGATCACATTGAGAGGAACTTAATTCTTCTTGGTTCCACAGCAGTTGAGGACAAGCTTCAAAATGGGGTCCCTGAATGCATAGACAAACTTGCTCAAGCTGGGATTAAGATCTGGGTTTTGACTGGGGACAAGATGGAGACTGCGATCAATATTGGTTTTGCCTGTAGTTTGCTGAGACAAGGAATGAAACAGATCATTATATCTCTGGAGACACCAGAAATTCAAGCCTTAGAAAGGACGGGAGAGAAGGATATGATCACTAAGGCATCAAAAGAAAGTATCGTCCACAAGATAAATCGGGCAAGATCTCAGATCACTGCATCAAGTGGAAGCTCTGAGGCTTATGCATTGATAATTGATGGGAAATCACTTACTTATGCTCTAGAGGATGATGTGAAGGATGCATTCCTTGACCTTGCAATTGGATGTGCGTCTGTTATTTGTTGTCGCTCATCTCCAAAGCAAAAGGCAATGGTCACTAAGTTGGTTAAACTTGCAACGGGGAAAACAACATTAGCAATTGGTGATGGTGCAAATGATGTTGGAATGCTTCAAGAAGCAGATATTGGAGTTGGAATCAGTGGTGCCGAAGGGATGCAGGCAGTCATGTCGAGTGATATTGCAATTGCTCAGTTCAGATATTTGGAGCGTCTTCTGCTTGTGCATGGACATTGGTGTTACAGGAGATTATCATCAATGATTTGCTACTTTTTCTACAAGAATTTCACATTTGGTTTTACGCTTTTCTTATATGAGGCATACACTTCATTCTCTGGACAACCTGCATATAATGACTGGTTTATGTCACTCTACAATGTTGTGTTCTCGTCTCTGCCAGTTGTGGCCCTCGGGGTGTTTGACCAAGACGTGTCTGCAAGATACTGCCTTAAGTTTCCTATGTTGTACCAACAAGGTGTACAGAACGTCCTCTTCAGCTGGGTTAGGATACTTGGCTGGATGTTTAATGGTCTTTGTAGTGCAGTGATCATTTTCTATTTCTGCACAAGTGGAATGCAGCATCAAGCATTTAATTCCGAGGGGAAAACTGTGGGGAGGGATATTCTAGGAGCGACGATGCTGTCATGTGTTGTTTGGGTTGTCAACTTGCAGATGGCTCTCTCCGTTAGCTACTTCACTTTGCATTTCGACAACTGCATATCGCGTGTTCCTCGAAGCCCTTGCTCCTGCCGGGTCTTATTGGCTTCTGCTGATATTTGTGGTGATCTCTACTCTCATTCCATTCTTTGTATACTCAGCATTACAGTTGAATTTCTTTCCCATGCAAAGCTCATTGAGACCAACAACTGTGGGCTTCACTGCTCGTTTGGCAGCCAAAATAAGAAGAGAAAAATCATAGAACCTGAAATTGAAACACCATTTCCCCAAAAGCTTCCAAAGCCAAACTTTCCCTTCTCATGCAAATCTTGCATAACCTTCTCAATCTCTTCCATACAACAACTCAACCCCAACTCATTTTCTTCGCTTCTCATACATCTTCCCTTACTATTTCCTTTAAGCTCATCTCTCGTACCACCCTTTTCTTTCCCTACCATCTTTTCCTCTTTTTCTCTCATTCTTAGCCTTCTCTTTGCAAATTCTCTCGTCTTTCGAACGAGTTTCCATGGAAGCTTGAGTAACAAAAGGAGAATGATCTGCAACGCCAAGCATTGGCAGCAACAGCATATGACAATGCAGTCGGCCGCTAGTGTGTTCATATCTTCCATGGTGGCGGAAAATGGTTGA 3822 41.34 MRTENRKRKLRLSKIYSFACGKASLRDEDHSQIGRPGFSRVVFCNDPDCLEAGMRNYVNNSIRSTKYTPINFLPKSLFEQFRRVANFYFLIAGILAFTPLAPFTAVSAIIPLIAVIIATMVKEGIEDWRRQAQDIEVNNRKVKVHQGNGVFDLTEWKTLRVGDIVKVGKDQYFPADLLLISSCYEDGICYVETMNLDGETNLKVKQALDATAFANEDSNFRDFKATIKCEDPNANLYTFVGSMDFEEQQYPLSPQNLLLRDSKLRNTEYIYGVVVFTGQDSKVIQNSTDPPSKRSKVEKKMDKIIYLLLSILFVLAFIGSIVFGVVTKDDLKNGRTKRWYLRPDDSTIFFDPNNAPAAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGSGVTETERAMEGRNSMPMLNGNGIGNIHKSNADASDTNPSVKGFNFKDKRIMNGNWVNEPHADVIQKFFSLLATCHTAIPDVDENTGKVSYEAESPDEAAFVIAAREIGFEFYQRTQTSISIRELDPRSGRKVKRSYKLLNVLEFNSARKRMSVIIRDEEGKVLLLCKGADSVMFERLAKNAREFEEKTKEHINEYADAGLRTLLLAYRELDEEEYKEFDRKFYEAQNSVSAEREAMIDKVTDHIERNLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIISLETPEIQALERTGEKDMITKASKESIVHKINRARSQITASSGSSEAYALIIDGKSLTYALEDDVKDAFLDLAIGCASVICCRSSPKQKAMVTKLVKLATGKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRLSSMICYFFYKNFTFGFTLFLYEAYTSFSGQPAYNDWFMSLYNVVFSSLPVVALGVFDQDVSARYCLKFPMLYQQGVQNVLFSWVRILGWMFNGLCSAVIIFYFCTSGMQHQAFNSEGKTVGRDILGATMLSCVVWVVNLQMALSVSYFTLHFDNCISRVPRSPCSCRVLLASADICGDLYSHSILCILSITVEFLSHAKLIETNNCGLHCSFGSQNKKRKIIEPEIETPFPQKLPKPNFPFSCKSCITFSISSIQQLNPNSFSSLLIHLPLLFPLSSSLVPPFSFPTIFSSFSLILSLLFANSLVFRTSFHGSLSNKRRMICNAKHWQQQHMTMQSAASVFISSMVAENG 1273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11370136 11378022 - CePI673135_06g008800.1 Cec06g0880 205617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0880 1273 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1075 IPR023298 -
Cec06g0880 1273 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Cec06g0880 1273 Gene3D - 551 677 IPR023299 GO:0000166(InterPro)
Cec06g0880 1273 Gene3D - 699 907 IPR023214 -
Cec06g0880 1273 Gene3D - 114 288 - -
Cec06g0880 1273 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Cec06g0880 1273 NCBIfam HAD-IC family P-type ATPase 833 949 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec06g0880 1273 FunFam Phospholipid-transporting ATPase 118 288 - -
Cec06g0880 1273 FunFam Phospholipid-transporting ATPase 545 703 - -
Cec06g0880 1273 FunFam Phospholipid-transporting ATPase 703 907 - -
Cec06g0880 1273 Pfam Phospholipid-translocating P-type ATPase C-terminal 895 1073 IPR032630 -
Cec06g0880 1273 SFLD Haloacid Dehalogenase 408 918 - -
Cec06g0880 1273 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 28 1074 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cec06g0880 1273 SUPERFAMILY HAD-like 421 922 IPR036412 -
Cec06g0880 1273 Pfam Cation transport ATPase (P-type) 525 629 - -
Cec06g0880 1273 NCBIfam phospholipid-translocating P-type ATPase 57 1073 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cec06g0880 1273 Coils Coil 626 646 - -
Cec06g0880 1273 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Cec06g0880 1273 CDD P-type_ATPase_APLT_Dnf-like 59 1027 - -
Cec06g0880 1273 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Cec06g0880 1273 PRINTS P-type cation-transporting ATPase superfamily signature 867 886 - -
Cec06g0880 1273 SFLD p-type atpase 408 918 IPR044492 -
Cec06g0880 1273 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 433 675 IPR023299 GO:0000166(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1685 Cec-Chr1:31468922 Cec06g0880 Cec-Chr6:11370136 0.00E+00 dispersed
Cec05g2714 Cec-Chr5:37662051 Cec06g0880 Cec-Chr6:11370136 1.20E-254 dispersed
Cec06g0880 Cec-Chr6:11370136 Cec09g0074 Cec-Chr9:619213 0.00E+00 dispersed
Cec06g0880 Cec-Chr6:11370136 Cec05g2547 Cec-Chr5:36480150 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0880 K01530 - csv:101205800 2045.01