Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0928 | ATGTCGTCTCCGGCTCCGACCTCGCCGCCGGCCACTAACACGACCTCACCCCCACCTCCCACCACCACCGCACCACCCCCAGCACCTCCGTCTCTCGTACCGCCGCCTCCCGACGCTTCCTCTCAGCCTCCACCTGCTTCATCTCCGCCGCCTTCCACCACTTCTTCGCCGCCCCCTCCGGACACTACCCCTCCATCTCCGCCTACTTCTTCTCCTTCACCGCCAACCACGCCTTCGAGCTCTTCGCCGCCGCCGCCTCCTCCTCCGTCTACCAACTTGACTGCTCCCCCGCAGCTGCCGAGTCCGACGCCGCCCTCGGCTTCTGGCACACCTGCGAGTCCCGGAGCAAATCTGTCTCCGCCGTCTTCCTCACCATCGTCCGGTAATTCTGCCGGACTTGTAGCTGGAGTTGCTGTTGCTGGAGTGGTGGTAGTGGTTGTGGCGTTGCTTGTTATGTTTTTGTGTTTAAGAAAGAAGAGAAGACGCGACGAGGAGGCTTACTACCGGCCCCCCCCGCCCGCGGCGTTTAAAGATGGCCCATATGGTCCACAACAGCACCACTGGCAATCACATCCCCCGCCGCCGCCGCCGTCAGATCATTTCGTGGGAGCAGTGCTGAAGCCGTCTCCTCCGCCAGCATCACGGCCACCGCTCTCACCTCCGATTATAAACAGCAGTGGAGGCTCTGGATCTAATTATTCAGGGTCTGAAAATTCGCTTGCTCCTGCTCCATCTTCTATTCCCTTGGGCTTCTCACAAAGCAGCTTCACTTATGAAGAGTTAGCAATGGCGACAGATGGGTTTTCAGAAGCCAACCTCCTCGGACAAGGTGGGTTTGGTTATGTTCATAAAGGAGTACTTCCAAATGGAAAGGAAGTGGCAGTGAAGCAACTTAAAGCTGGAAGTGGACAGGGAGAGCGTGAATTTCAAGCAGAAGTGGAAATAATCAGCCGAGTTCATCATAGACATCTTGTTTCCTTAGTGGGATATTGCATTACTGGCTCCAAAAGATTGCTGGTTTATGAATTTGTTCCCAACAACACATTGGAGTTCCACTTGCATGGGAAAGGACGACCCACCATGGACTGGCCAACGAGACTGAAAATTGCTTTGGGATCTGCCAAGGGATTAGCCTACCTTCATGAGGACTGTAATCCTAAGATTATTCATCGTGACATCAAAGCAGCAAATATACTTTTGGATCTCAAATTCGAAGCAAAGGTTGCAGATTTTGGGCTTGCTAAGTTGTCTTCTGATGTTAATACTCATGTTTCAACCCGAGTCATGGGAACTTTTGGATACCTTGCTCCTGAATATGCTTCAAGTGGGAAACTCACTGAGAAATCAGATGTCTTCTCCTTTGGAGTGATGCTTTTGGAGATGATTACTGGACGCAGACCTGTAGATACAACTCAATCATTCATGGACGATGGATTGCTTGATTGGGCAAGGCCATTACTGTTACGGGCCACCGAAGATGGGGTGTATGACGGTCTAGTAGATCCCAAGCTGAGAGATAACTATGACCACAACGAGATGGCTCGCATGGTTGCTTGCGCGGCTGCCTGTGTGCGCCATTCAGCAAGGCGCCGACCACGGATGAGTCAAGTGGTTCATGCTCTTGAAGGTGAAGCCTCACTTTCTGATCTTAATGAAGGGATTCGACCTGGACATAGCTCTGTCTACAGTTCTTATGGAAGCTCTGACTACGACACAGCTCAGTACAATGAGGACCTGAAAAAGTTCAGGAAGATGGCATTGGCGAGTCAGGAGTACGGCAGTGAGTACAGCGAGCCAACGAGTGAGTATGGTTTGTATCCATCTGGGTCGAGTGGCGATGGCCAAACAACCAGGGAAATGGAGATGAGAACGATGAAGAAAGAAAGTGGAGGTTTTAATGGAAGCTCATAA | 1911 | 51.91 | MSSPAPTSPPATNTTSPPPPTTTAPPPAPPSLVPPPPDASSQPPPASSPPPSTTSSPPPPDTTPPSPPTSSPSPPTTPSSSSPPPPPPPSTNLTAPPQLPSPTPPSASGTPASPGANLSPPSSSPSSGNSAGLVAGVAVAGVVVVVVALLVMFLCLRKKRRRDEEAYYRPPPPAAFKDGPYGPQQHHWQSHPPPPPPSDHFVGAVLKPSPPPASRPPLSPPIINSSGGSGSNYSGSENSLAPAPSSIPLGFSQSSFTYEELAMATDGFSEANLLGQGGFGYVHKGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSKRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCNPKIIHRDIKAANILLDLKFEAKVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLEMITGRRPVDTTQSFMDDGLLDWARPLLLRATEDGVYDGLVDPKLRDNYDHNEMARMVACAAACVRHSARRRPRMSQVVHALEGEASLSDLNEGIRPGHSSVYSSYGSSDYDTAQYNEDLKKFRKMALASQEYGSEYSEPTSEYGLYPSGSSGDGQTTREMEMRTMKKESGGFNGSS | 636 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 12711115 | 12713682 | + | CePI673135_06g009280.1 | Cec06g0928 | 205665 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0928 | 636 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 98 | 585 | IPR047117 | - | |
Cec06g0928 | 636 | PRINTS | Proline rich extensin signature | 26 | 43 | - | - | |
Cec06g0928 | 636 | PRINTS | Proline rich extensin signature | 4 | 20 | - | - | |
Cec06g0928 | 636 | PRINTS | Proline rich extensin signature | 47 | 72 | - | - | |
Cec06g0928 | 636 | ProSitePatterns | Protein kinases ATP-binding region signature. | 274 | 296 | IPR017441 | GO:0005524(InterPro) | |
Cec06g0928 | 636 | FunFam | Proline-rich receptor-like protein kinase PERK1 | 344 | 552 | - | - | |
Cec06g0928 | 636 | MobiDBLite | consensus disorder prediction | 1 | 109 | - | - | |
Cec06g0928 | 636 | Gene3D | Transferase(Phosphotransferase) domain 1 | 344 | 553 | - | - | |
Cec06g0928 | 636 | FunFam | proline-rich receptor-like protein kinase PERK1 | 246 | 343 | - | - | |
Cec06g0928 | 636 | MobiDBLite | consensus disorder prediction | 187 | 201 | - | - | |
Cec06g0928 | 636 | ProSiteProfiles | Protein kinase domain profile. | 268 | 547 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0928 | 636 | MobiDBLite | consensus disorder prediction | 164 | 239 | - | - | |
Cec06g0928 | 636 | Pfam | Protein tyrosine and serine/threonine kinase | 272 | 541 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec06g0928 | 636 | MobiDBLite | consensus disorder prediction | 593 | 618 | - | - | |
Cec06g0928 | 636 | SMART | serkin_6 | 268 | 517 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0928 | 636 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 388 | 400 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec06g0928 | 636 | Gene3D | Phosphorylase Kinase; domain 1 | 243 | 343 | - | - | |
Cec06g0928 | 636 | MobiDBLite | consensus disorder prediction | 110 | 130 | - | - | |
Cec06g0928 | 636 | SUPERFAMILY | Protein kinase-like (PK-like) | 243 | 541 | IPR011009 | - | |
Cec06g0928 | 636 | MobiDBLite | consensus disorder prediction | 220 | 239 | - | - | |
Cec06g0928 | 636 | MobiDBLite | consensus disorder prediction | 593 | 636 | - | - | |
Cec06g0928 | 636 | MobiDBLite | consensus disorder prediction | 1 | 130 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec06g0928 | Cec-Chr6:12711115 | Cec11g0464 | Cec-Chr11:4945963 | 8.30E-158 | dispersed | |
Cec02g0222 | Cec-Chr2:2127350 | Cec06g0928 | Cec-Chr6:12711115 | 7.90E-64 | transposed | |
Cec11g0254 | Cec-Chr11:2691823 | Cec06g0928 | Cec-Chr6:12711115 | 1.90E-197 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72080 | PF07714 | PK_Tyr_Ser-Thr | 1.80E-46 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0928 | - | - | - | 0.0 |