Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0948 | ATGGATAATTTACCCCCGCTAAATGCTCAAATTGATAGTGCGGAACCGGGTAATGTTGTTTCATCTGATGTTCCTGCTAAAAGACTAGCTAGGCAGCTGGATTTTACGGGGTTTGGTGGTGCAGTCTTGCCGGAGCATCCTCATTTTCAGTCTCAGCCTCCGTGTCAACAATCAGAGTCACCGGCCGTCATGGTGGTGCAGAGTCAGTCGCAGCCACAGTCCCCACAACATTTGACGGTTTTGCCCGTTGTAACAAAAGCGTCTCATCCTGCGAGAAAGCCAGATTCTCCAAAGTCAAGATCAAGGTCTAGTGTTGAAACAAAAGATGCTACTCCAAAGAAACAAAAACAGTGCAACTGCAAACACTCACGCTGCTTAAAGCTGTACTGCGAGTGCTTTGCATCTGGAATATACTGTGATGGTTGCAATTGCACAAATTGCCATAACAATGTTGAGAATGAAGCTTCTAGGAGAGAAGCAGTCGAAACTACTTTAGAACGTAATCCAAATGCATTCCGACCAAAAATTGCTAGCAGCCCACATGGAACACTAGAGAGCAGGGATGAGATTGGAGAAGTAGTAATGCTGGGAAAGCACAACAAAGGATGCCATTGCAAGAAATCAGGTTGCTTAAAGAAGTATTGTGAGTGCTTTCAGGCCAATATTCTCTGCTCTGAAAACTGCAAGTGCATGGACTGTAAGAATTTTGAAGGCAGTGAAGAGAGACAGGCTCTTTTCCATGTTGACCATGCCAACAACTTGGCTTATATTCAACAGGCAGCAAATGCTGCAATAACTGGAGCTATTGGATCCTCTGGTTATGTTTGCCTTCCCACTTCAAAGAAAAGAAAAGGTCCAGAGCTATGCTTTGGCCCTGTAGGGAAGGATTCCCCCCTCAACAGCATACCAGAATTTCATCAGGCAAATAATGTAATGTCTTCAGGCACGTCTACTTCATCTCCCTTCCCAGTTGCTCATGTTGGCAATGGCAGCCCTGCAGCATCAAAGTTCTCATTCAGGTCCTTATTAGCTGACCTCATCCAACCGCATGACTTGAAGGAGCTTTGCTCAGTTTTAGTGGTGTTTTCAAGTGAAGTTGCCAAGAAAATAGCAGAACAAAGAAATGCTGAGAAACAGATAAATGACCCACCACAGATTTCTCGTGCTTCATCTACTGTTGATGAGTCACAGCATCAGAAGGCCGAAGAGAAAGCTGCAGATGGCGAGTGTGGAAGTTCAAACCGAAGTGATAGGAGTGTACATGATAATTCCAATTCAGATAGTTCGGATATTACAAAAGCAAGGCCGATGTCCCCTGGAACTTTAGCTTTAATGTGTGATGAACGAGATACAATGTTCATGGGAGCTGGTCTAGCTGATGGGTTGGCAGGCCATGATTGCAACACATCATCACATATGCCTGATAAGTCTGTGTCAGAAGTCTACATCGAGCAAGAACGGATTGTGTTGACAAAGTTTCGAGATTGTCTTAATAAACTCATCACTCTGGGAGAGATAAAAGAAACAAAATTCACTTCTAGAAGCGAAGTGGGGAATGAAAATCTCAGCAACAATTTCACCTCAAATAATGGGTGCCAACAGAGATCTATTAGCAATGGGGTTGTAAAAAATGTCGCTCTCTCGGCACACAGAATACCGCCAGTCGGCGCTGCAGCTCGTCACCCGAATAACGATCTCCTACTCAAAATTCTACCACTTCCTAAAAATAGCAAGAGTAAACCACAAGTTGACAGAGAAGTCTAG | 1764 | 44.16 | MDNLPPLNAQIDSAEPGNVVSSDVPAKRLARQLDFTGFGGAVLPEHPHFQSQPPCQQSESPAVMVVQSQSQPQSPQHLTVLPVVTKASHPARKPDSPKSRSRSSVETKDATPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCTNCHNNVENEASRREAVETTLERNPNAFRPKIASSPHGTLESRDEIGEVVMLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHVDHANNLAYIQQAANAAITGAIGSSGYVCLPTSKKRKGPELCFGPVGKDSPLNSIPEFHQANNVMSSGTSTSSPFPVAHVGNGSPAASKFSFRSLLADLIQPHDLKELCSVLVVFSSEVAKKIAEQRNAEKQINDPPQISRASSTVDESQHQKAEEKAADGECGSSNRSDRSVHDNSNSDSSDITKARPMSPGTLALMCDERDTMFMGAGLADGLAGHDCNTSSHMPDKSVSEVYIEQERIVLTKFRDCLNKLITLGEIKETKFTSRSEVGNENLSNNFTSNNGCQQRSISNGVVKNVALSAHRIPPVGAAARHPNNDLLLKILPLPKNSKSKPQVDREV | 587 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 13038286 | 13043680 | - | CePI673135_06g009480.1 | Cec06g0948 | 205685 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0948 | 587 | SMART | CXC_2 | 198 | 239 | IPR033467 | - | |
Cec06g0948 | 587 | SMART | CXC_2 | 113 | 153 | IPR033467 | - | |
Cec06g0948 | 587 | PANTHER | TESMIN/TSO1-RELATED | 45 | 510 | IPR028307 | GO:0005634(PANTHER)|GO:0006355(PANTHER) | |
Cec06g0948 | 587 | MobiDBLite | consensus disorder prediction | 50 | 81 | - | - | |
Cec06g0948 | 587 | ProSiteProfiles | CRC domain profile. | 114 | 238 | IPR005172 | - | |
Cec06g0948 | 587 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Cec06g0948 | 587 | MobiDBLite | consensus disorder prediction | 395 | 424 | - | - | |
Cec06g0948 | 587 | MobiDBLite | consensus disorder prediction | 378 | 394 | - | - | |
Cec06g0948 | 587 | MobiDBLite | consensus disorder prediction | 374 | 438 | - | - | |
Cec06g0948 | 587 | MobiDBLite | consensus disorder prediction | 46 | 108 | - | - | |
Cec06g0948 | 587 | MobiDBLite | consensus disorder prediction | 91 | 108 | - | - | |
Cec06g0948 | 587 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 115 | 150 | IPR005172 | - | |
Cec06g0948 | 587 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 201 | 235 | IPR005172 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec06g0642 | Cec-Chr6:7160585 | Cec06g0948 | Cec-Chr6:13038286 | 3.10E-32 | dispersed | |
Cec06g0948 | Cec-Chr6:13038286 | Cec08g1356 | Cec-Chr8:25493608 | 4.90E-27 | dispersed | |
Cec11g0247 | Cec-Chr11:2634808 | Cec06g0948 | Cec-Chr6:13038286 | 9.20E-167 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29776 | PF03638 | TCR | 3.10E-12 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0948 | - | - | - | 0.0 |