Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0972 ATGAGTGGTACTACCGCTATTACTGTCTTAGTTAGAGGTAGGACTATATATGTTGCTAATTCAGAAGGAGATGATGGTGATCCTCCTAGGCTTTGGGTGCCTAATGGGATGTACCCTAGCACTACTTTCACAAGAAGTAGTGGTGACTCAATTGCAGAGACTATTGGAGTTGTTGTTACACCTGAAATTGTTGTTCTTGAGCTGACACCAGATCATCCTTTCTTTGTTGTTGCCAGTGATTGTGTATTCGAGTTTCTTTCAAGCCAAACTGTGGTTAACATGGTTACTAAATATAAAGATTCTCGTGATGCTTGTGCTGCAATTGTGGTTAAGTCTTACAGACTTTGGCTTCAATTTGAGACTCGAACAGATGATATCACTATTCTCGTGGTGCATATTAATGGGCTAACCAATATTTTTACTAGTGAATCGACAAGATCCAATGGAGGTGGTTTTGTTCCATATGCTCTTCCTCAAGTCGTGGAGGTGACAGGATCAGAGTCTTCCCCTACATTTGGCTGGAATAGAAACAACCGGGCAACGCAAGTTTTGTCAAGGGCACGTCTCTGGGCTATCGAAAGTTCCCTAGAGAATGGGCAAGTGTTGAGTTTTTGGCTTCCTACGCCTACTCCACAGGCACATATTGAACGAGCATTGCACAACCATTTGCTCTTCAAAAAACTAACTGATTCTCAGTATCAAGTTTCATTAGATTGCATGCAGAGAGTTGAGGATGGCGAAGGTGACTGTTTTTATGTGGTTGGCAGTGGAGATTTTGAGGTCTTGGCAACCCAGGAAGAAAGTCATGGAGAGGTTCCTTGGATTCTGCAACACTATACAGCTGAGAAGCTCTCTTCCTTCGGGGAACTGGCTTTGATGTATAAAAAACCACTTCAAGCCTCGGTACGTGCTGTGACAAGCAGTACACTTTGGGCTTTGAAAAGAGAGAACTTTCGTGGAATTCTTATATTAGAATTTTCTAACTTGTCATCTTTGAAATTGCTTCGACTTGTGGAGCTTTTGTCGAAGTTAACAATCTTGCAATTGAGCCACATTGCAGACTGCCTTTTTGAAGTTCACTTCTCGGATGGGGAGCTGATTGTTGATGGGACCAAAGCCTTATGTGCACTGCACATTATTCGAAAGGGACAAGTGAGGATTACTTTTGATGTAATGAGCAATTCAGATGATTACAGCTTCGATTATGCCAGCCAAAAAGAGGATGATGCTGCACAGAGTGGTAACGAGATCTCAGCTATTAGGAAAGAGGGAAGTTATTTTGGCGAGTGGGCACTTCTTGGTGAGCGTGTCGGCTTCTTACATGCAGTTGCTATAGGAGATGTTGCGAAAGAACACTCTTCAAAATCTCTCCATCAGTCTGCCAAAGTTATGGATATTTCAGCTTTTTCAAAAGCTGAGCTCTCTAATTTGGAGTGGAAAACGTGTTTATATTCCACAGAATACAGTGAAATTGGGCTAGTTCGGTTAAGGAATACAGAAAGTATGCTTAGTTTAAAAAGGTTTACAAGACAGAAGGTCAAAAGGCTGGGACTTGAAGCACAAGTTTTGAAGGAGAAAAATATTATGAAGACCATCAGTTCTTCAGCTTGCATGCCGAAACTTCTCTGCACTTGTTTTGATCAATCGTATGTTGGCATATTGCTAAACACATGCCTTGCCTGTCCTTTGTCTTCGATACTTCATGTCCCACTCGATGAATCTTCTGCACGTTTCTTTGCAACCTCTCTTGTTATGGCATTAGAAGATATGCACAAGTTACTTGAAGTTGATGAGAAGAAAAGACTTGGAAACGAGAACCAAAACTCTGTTAGAAGTCATCCATGGTTTGATGGCGTTGATTGGAAGGGGATCCATGATGGTACCTTTCCTATTCCCCAGACAATAACTTCTCGTGTGGCTCAGCATTTAGAGTGCTACCCGGAAGATTGCAGTGTTTCTTTAGTTAAAACATCTCAAGATCTTGAAGAACAGTATACCCCCGAGTGGATCATCGACTGGTAG 2022 41.89 MSGTTAITVLVRGRTIYVANSEGDDGDPPRLWVPNGMYPSTTFTRSSGDSIAETIGVVVTPEIVVLELTPDHPFFVVASDCVFEFLSSQTVVNMVTKYKDSRDACAAIVVKSYRLWLQFETRTDDITILVVHINGLTNIFTSESTRSNGGGFVPYALPQVVEVTGSESSPTFGWNRNNRATQVLSRARLWAIESSLENGQVLSFWLPTPTPQAHIERALHNHLLFKKLTDSQYQVSLDCMQRVEDGEGDCFYVVGSGDFEVLATQEESHGEVPWILQHYTAEKLSSFGELALMYKKPLQASVRAVTSSTLWALKRENFRGILILEFSNLSSLKLLRLVELLSKLTILQLSHIADCLFEVHFSDGELIVDGTKALCALHIIRKGQVRITFDVMSNSDDYSFDYASQKEDDAAQSGNEISAIRKEGSYFGEWALLGERVGFLHAVAIGDVAKEHSSKSLHQSAKVMDISAFSKAELSNLEWKTCLYSTEYSEIGLVRLRNTESMLSLKRFTRQKVKRLGLEAQVLKEKNIMKTISSSACMPKLLCTCFDQSYVGILLNTCLACPLSSILHVPLDESSARFFATSLVMALEDMHKLLEVDEKKRLGNENQNSVRSHPWFDGVDWKGIHDGTFPIPQTITSRVAQHLECYPEDCSVSLVKTSQDLEEQYTPEWIIDW 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13706746 13711171 + CePI673135_06g009720.1 Cec06g0972 205709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0972 673 ProSiteProfiles PPM-type phosphatase domain profile. 1 133 IPR001932 -
Cec06g0972 673 CDD CAP_ED 342 448 IPR000595 -
Cec06g0972 673 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 590 669 - GO:0004691(PANTHER)|GO:0005952(PANTHER)|GO:0007165(PANTHER)|GO:0018105(PANTHER)
Cec06g0972 673 Gene3D Phosphorylase Kinase; domain 1 478 561 - -
Cec06g0972 673 SUPERFAMILY Protein kinase-like (PK-like) 481 592 IPR011009 -
Cec06g0972 673 CDD CAP_ED 224 322 IPR000595 -
Cec06g0972 673 ProSiteProfiles cAMP/cGMP binding motif profile. 340 433 IPR000595 -
Cec06g0972 673 SUPERFAMILY cAMP-binding domain-like 332 448 IPR018490 -
Cec06g0972 673 Gene3D Transferase(Phosphotransferase) domain 1 562 592 - -
Cec06g0972 673 SUPERFAMILY PP2C-like 2 135 IPR036457 -
Cec06g0972 673 SUPERFAMILY cAMP-binding domain-like 203 322 IPR018490 -
Cec06g0972 673 Gene3D Jelly Rolls 328 450 IPR014710 -
Cec06g0972 673 Gene3D Jelly Rolls 207 327 IPR014710 -
Cec06g0972 673 Pfam Protein phosphatase 2C 44 101 IPR001932 -
Cec06g0972 673 Pfam Cyclic nucleotide-binding domain 246 322 IPR000595 -
Cec06g0972 673 Gene3D - 21 134 IPR036457 -
Cec06g0972 673 ProSiteProfiles cAMP/cGMP binding motif profile. 244 322 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0661 Cec-Chr5:5357613 Cec06g0972 Cec-Chr6:13706746 1.10E-39 dispersed
Cec06g0972 Cec-Chr6:13706746 Cec06g0567 Cec-Chr6:6278687 2.60E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0972 - - - 0.0