Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0999 ATGGGCAAAACCGATTCAATCAATGGTTTCTCTGATCTTGTTCAACATCCAGATTTCTCCCACTATGTTGAAATTGATCCCACTGGCAGATATGGAAGATACAATGAAATCCTCGGCAAAGGAGCTTCCAAGACAGTTTACAGAGCATTTGACGAGTATGAAGGGATTGAAGTTGCTTGGAACCAGGTCAAACTCTGTAACTTCCTTCAATGCCCTGAAGATCTTGAGAGGCTATACTCTGAGATTCATCTCTTGAAAACATTGAAACATAAGAACATTATGAAATTCTATACTTCTTGGGTCGATACTGCAAATAAGAACATCAACTTTGTAACTGAAATGTTCACTTCTGGGACTTTGAGGCAGTATAGGCTAAAGCATAGGAGAGTTAACATTAGAGCAGTGAAGAGATGGTGTAGACAAATTTTGAGGGGTCTTCACTATCTCCATAGCCAAGACCCCCCTGTGATCCACAGAGATCTCAAGTGTGACAACATTTTTGTTAATGGTAACCAAGGAGAAATTAAAATTGGAGACCTTGGTCTTGCTGCTATCCTCCGGAAATCACATGCTGATCATTGTGTCGGGACACCAGAATTCATGGCTCCTGAAGTATATGAAGAGGCATATAATGAATTGGTAGACGTCTATTCTTTTGGGATGTGTGTTTTGGAGATGGTTACGTTTGAATATCCATATAGTGAATGTAATCATCCTGTTCAAATCTATAAGAAAGTAATTTCTGGGAAAAAACCAGCTGCCTTGTATAAAGTGAAGGATCCGAGCATGCGTCAATTCGTCGAGAAATGCCTGGCCCCAGTCTCTTGTAGACTTTCAGCAACGGAGCTTTTGAGTGACCCTTTTCTCCAAATTGATGATTGTGAAAGCAAGCCAAAAATTTCAGATTCTCGGGGAGAACTGGACGATTTTGCTTCCACAGCACACCCTTTCCTTGAACAAGAAAAAATATTTAACTCAATTAGTTACAGTATAGAGGCCTCAGATGAATGGAGGTGCCGTACAGTTCAGAAGGAACCGGATGGGATTGAACTTTTTGAGGACAATGATAATGACCAATTGGAAAATCTTGATAACAGTATTAAGGGGAAGATAAGAGAAGATGGCAATATTGTTTTAAGACTTAGGATTGCAGATAAAGAAGGACATATTCGGAACATATATTTCCCATTTGACACCAAGAATGATACAGCATTAACAGTAGCCACCGAAATGATAGCAGAACTTGATATTAGTGACCAAGATGTGATCAAGATAGCTGAAAAAATTGATGGGGAAATTGCTTCCTTGGTACTCGACTGGAAGCCAGGGCCTGGCATTGACGAAACACCCCGTATCTCTTACGATGGTGGCTCTCAAAGCTATAACGTCTCTAATCAACCATCTGTTAATTCTTTAACAGAGAGTAAGCAAAATGGACCAAAACTCTATCAGATTTTAAACTGCAGCACAGAGCAGTTCTTCCTCAAAGCAGATCAGCCTACACAGTCTGTAGTAGAGAGCATACCAAAAGTGTCAAGCCAGCACTATCAGTCAAACTCTGTCCTCCATGAAAACCAAGCTCCTAGTTCTCATAGTTTTAGGCAAAGACATTCTGATGAAAATTACAAGAAAACTGACCAATCAGTTGGATATAACAAAGAAAAAGTACCAGATAACAAAGCCACTGTCATTGATAGAACTTCACTAAGAAGCTTATTGGGTTCCCGATCGCTGTCCACGGTTCCATCCTATTGTGAAGATAAATTTCCCTCTCAAATCCATTGGGAAATTAGATGGCTATGGAATTGA 1809 39.97 MGKTDSINGFSDLVQHPDFSHYVEIDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLCNFLQCPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTANKNINFVTEMFTSGTLRQYRLKHRRVNIRAVKRWCRQILRGLHYLHSQDPPVIHRDLKCDNIFVNGNQGEIKIGDLGLAAILRKSHADHCVGTPEFMAPEVYEEAYNELVDVYSFGMCVLEMVTFEYPYSECNHPVQIYKKVISGKKPAALYKVKDPSMRQFVEKCLAPVSCRLSATELLSDPFLQIDDCESKPKISDSRGELDDFASTAHPFLEQEKIFNSISYSIEASDEWRCRTVQKEPDGIELFEDNDNDQLENLDNSIKGKIREDGNIVLRLRIADKEGHIRNIYFPFDTKNDTALTVATEMIAELDISDQDVIKIAEKIDGEIASLVLDWKPGPGIDETPRISYDGGSQSYNVSNQPSVNSLTESKQNGPKLYQILNCSTEQFFLKADQPTQSVVESIPKVSSQHYQSNSVLHENQAPSSHSFRQRHSDENYKKTDQSVGYNKEKVPDNKATVIDRTSLRSLLGSRSLSTVPSYCEDKFPSQIHWEIRWLWN 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 14618325 14621032 - CePI673135_06g009990.1 Cec06g0999 205736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0999 602 MobiDBLite consensus disorder prediction 515 532 - -
Cec06g0999 602 Gene3D Phosphorylase Kinase; domain 1 18 113 - -
Cec06g0999 602 Gene3D - 375 438 - -
Cec06g0999 602 CDD STKc_WNK 30 289 - -
Cec06g0999 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g0999 602 ProSiteProfiles Protein kinase domain profile. 32 289 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0999 602 MobiDBLite consensus disorder prediction 515 553 - -
Cec06g0999 602 SUPERFAMILY Protein kinase-like (PK-like) 35 290 IPR011009 -
Cec06g0999 602 Pfam Protein kinase domain 35 289 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0999 602 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 377 433 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
Cec06g0999 602 FunFam Probable serine/threonine-protein kinase WNK1 17 113 - -
Cec06g0999 602 MobiDBLite consensus disorder prediction 533 553 - -
Cec06g0999 602 SMART serkin_6 32 289 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g0999 602 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 21 549 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cec06g0999 602 Gene3D Transferase(Phosphotransferase) domain 1 115 294 - -
Cec06g0999 602 FunFam probable serine/threonine-protein kinase WNK9 115 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0769 Cec-Chr4:27083098 Cec06g0999 Cec-Chr6:14618325 4.90E-115 dispersed
Cec06g0622 Cec-Chr6:7000913 Cec06g0999 Cec-Chr6:14618325 6.70E-183 dispersed
Cec06g0999 Cec-Chr6:14618325 Cec10g0455 Cec-Chr10:5435455 6.80E-101 dispersed
Cec06g0999 Cec-Chr6:14618325 Cec02g1719 Cec-Chr2:34930948 1.30E-205 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72081 PF00069 Pkinase 7.00E-50 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0999 K08867 - csv:101222641 1044.65