Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1056 ATGAGAGTCGGAGAGGGCAACACCCTCCTCAAAGTAAGGGTGGAGCGTAACTTGTTCTTTCGCAAGGAGTGTGATGCAGGGTCGAATGTGGTGATTGAGGAAAGAAGAACTCCATTTTTGTTCCAGAAGGCAAGTGTAGGGCTGGGCGGCAGTTATTTGGGATACTGGCAAAAGGTTGAAGATGGTGATGTGTCTTCTTTGCACCATGTATTATTTTGGGGAGAATCGATAGAGGTCTCTAGTCTTAAAAGGAAAGGTGTTGAACATGTCTTTTTGACCTCTGATCCATCAGTGGTTAGCTATTCAGGGGACTATTCCTCCTTGTCCTCTCCAGCTAAAGCTTTTACAGATGGGGTCCTCCTTTTCCGTCTCCTCTGGCCTGAGGGTGGAGGGTTCCTAAGTACCTCTTGTTTATGTGAGGAAGGTTTGGTTAAAGTTGGGAATCCTAAGGCCGATTATTTGATAAAGGAAGAGGCCCGGTATCTGTGTGCTGCAATGGGGCATGAAAATGAATCCTTAGATGAATTTGTGGAAGCGCACAAAACCTGCTTGAATGATCTTATGTACTTCCCCACTAGGAATGCTTATGGACTTTCGAGCGTTGCTGGAAACCATGAGAAACTAGCGGCCTTGCAGGATGAATTTGAGTATGTTAAAAAGAAAATGGATGATGATACTGAGAAGGCTGTCCGGTTGGAGAAGAAGGTTAAAGTTCTCACACATGGCTATGAGACACGGTCAAAACAGAGCCTTTGGCTGCAAATTGAGGCAACTTTCAAGCAGATAGACACTGCAGCAACAGAGCTGGAGTGCTTTGAAGCTCTTCAAAAACAAGAGATGTCAGCTGCTTCACACAGAATTAGTGGTATCTGGGAAGAGGTTCAAAAACAAAAAGAGCTGGAGAGAACTCTGCAGCTGCGTTATGGAAATCTTTTGGGGGACTTGGAAAAGATGCAGAAAATCATGGTTGATCTCAAAGCACAGGCACAAAAGGAAGAAATCGCAGCGCAGAGCCGTGCTCTTCAGTTGGCTGAGGCTGAGGCTGAGGCTGATCAAACCGTTGGAGAAAATGCTGATAGTTCTGAAGCCATGTCTGCATCAGTAGCAGTTGATTGTGAAAATTCTGTGCCTGTTACCTCAACCTCCAATGAATTAACAGTGGGAGAGAATGCATCATTGCCTGACAATGGCTTTGAAGATTATGATAAAAGTCAAACCACTGATGTTCCCTCTCAAGAACTCTCGGGTCCTGTTACAAATGGCACTCCAGATGTGACTGTTACAGTGGAAAATAACATCAGCAATGATTCGGTTGATGGTACAGCTATTGAAAATGTTAAATGTAGGACCGATATCGTCGAGGAAGTCAAAGATGCTGAAACTCAACAGTCTGTGACTGAAACTGAACATAACTCAGATGTGCATTTGACTAATCTGGATTCTGCTGCACCAGCATCTTCTAATGAGGGTAATGGGGAACTCCCTAGTGGCGAAGGGGAAGCAATGGAATCAAATGTCTAG 1521 44.64 MRVGEGNTLLKVRVERNLFFRKECDAGSNVVIEERRTPFLFQKASVGLGGSYLGYWQKVEDGDVSSLHHVLFWGESIEVSSLKRKGVEHVFLTSDPSVVSYSGDYSSLSSPAKAFTDGVLLFRLLWPEGGGFLSTSCLCEEGLVKVGNPKADYLIKEEARYLCAAMGHENESLDEFVEAHKTCLNDLMYFPTRNAYGLSSVAGNHEKLAALQDEFEYVKKKMDDDTEKAVRLEKKVKVLTHGYETRSKQSLWLQIEATFKQIDTAATELECFEALQKQEMSAASHRISGIWEEVQKQKELERTLQLRYGNLLGDLEKMQKIMVDLKAQAQKEEIAAQSRALQLAEAEAEADQTVGENADSSEAMSASVAVDCENSVPVTSTSNELTVGENASLPDNGFEDYDKSQTTDVPSQELSGPVTNGTPDVTVTVENNISNDSVDGTAIENVKCRTDIVEEVKDAETQQSVTETEHNSDVHLTNLDSAAPASSNEGNGELPSGEGEAMESNV 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17414581 17420760 - CePI673135_06g010560.1 Cec06g1056 205793

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1056 506 Coils Coil 315 347 - -
Cec06g1056 506 MobiDBLite consensus disorder prediction 399 424 - -
Cec06g1056 506 MobiDBLite consensus disorder prediction 458 506 - -
Cec06g1056 506 MobiDBLite consensus disorder prediction 354 390 - -
Cec06g1056 506 MobiDBLite consensus disorder prediction 347 424 - -
Cec06g1056 506 MobiDBLite consensus disorder prediction 465 493 - -
Cec06g1056 506 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 150 322 IPR047242 GO:0000398(PANTHER)|GO:0000398(InterPro)|GO:0000974(PANTHER)|GO:0000974(InterPro)|GO:0005681(PANTHER)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1056 K12860 - - csv:101206265 483.796
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec06g1057 . 1 634 MYB-Related Transcription Factor Family AT1G09770 83.3 1.8e-296 1015.4
Cec06g1056 . 151 367 MYB-Related Transcription Factor Family AT1G09770 53.2 1.7e-49 194.9
Cec10g0725 . 43 495 MYB-Related Transcription Factor Family AT3G18100 57.8 4.1e-150 528.9
Cec10g0725 . 43 495 MYB-Related Transcription Factor Family AT3G18100 57.8 4.1e-150 528.9
Cec06g1057 . 1 634 MYB-Related Transcription Factor Family AT1G09770 83.3 1.8e-296 1015.4
Cec06g1056 . 151 367 MYB-Related Transcription Factor Family AT1G09770 53.2 1.7e-49 194.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003356 2 0 1 2 1 3 2 2 2 1 1 1 2 1 2 3 2 2 2 2 5 1 1 1 1 1 0 1 2 2 49