Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1171 ATGGATCACAATCACTGCAATGGAAACTCTGATTCTCATATCAAAATACCAAAAATCAAGTTCACAAAGCTCTTCATCAATGGACAATTCGTTGACTCAATTTCAGGGAAAACTTTTGAGACCATAGATCCGAGAACCGAGGAGGTTATAACGACGGTCGCCGCTGGGGACAAACAAGACGTTGATTTGGCCGTGAAAGCCGCCCGTGAAGCCTTCGATCATGGCCCTTGGCCCCGCATGTCCGGCGCCGAGAGGGGCAGGATAATGATGAAACTAGCGGAATTGATAGATGAACACATGGAGGAATTAGCAGCGTTGGATACGATCGACGCTGGAAAATCGTTTCTAATGGGAAAGATGGTAGATATACCGGGGGCTGCAAATACGCTACGGTACTACGCAGGAGCAGCGGATAAATTCCACGGCGAAGTATTGAAAATGGCTAAACCGCTTCACGGTTACACGTTACTTGAGCCTATTGGAGTGGTGGGTCACATCATACCGTGGAATTTTCCGACGACCATGTTCTGGTTGAAAGTCAGCCCGGCGTTAGCTGCCGGCTGCACCATGATCGTCAAACCGGCCGAACAAACCCCTCTCTCCGCCCTCTTCTACGCCCATCTCGCCAAATTGGCTGGTATACCAGATGGAGTTCTGAACGTGGTGACTGGATATGGACCGACGGCGGGGTCAGGCATTGCGTCCCACATGGACATTGACAAGGTGAGCTTCACGGGATCAACTAAGGTGGGAAGGCTGGTAATGCAGGCAGCAAGTGCCAGTAATCTGAAGCAAGTGTCCTTGGAATTAGGAGGCAAATCACCCCTTCTAGTCTTTGATGATGCAGATCTGGACAAAGCAGTTGATCTTGCTCTCCTAGCTATTTTTTATAACAAGGGGGAAATTTGCGTGGCTGGCTCCCGGGTTTTGGTTCAAGAAGGGATATACGACGAATTCGTGAAAAAGATTACTGAAAAGGTCAAATCTTGGGTTGTGGGAGACCCTTTTGATCCTAAAGTTAAATATGGACCCCAGGTGGACAAAAAGCAAATGGATAAAATTCTGAAATACATAGAACACGGTAAAAAGGAAGGGGCAACATTGGTTACTGGCGGCAAGCGTATAGGCGAAGTGGGGTATTACGTCGAGCCCACAATCTTCACAAATGTCAAGGAAGACTCACTAATTGCCCAGGACGAAATATTCGGCCCCGTCCTCTCAGTCATAAAATTCAAGACAATTGAAGACGGAATAAGGAGTGCAAACAACACCAAGTACGGGCTAGCAGCTGGGATAGTGACGAACAGCTTAGACATAGCGAACACAGTGTCGAGGTCGATTCGAGCTGGTACGATTTGGATAAATTGTTACTTCGCTTTTGACCCAAGTTGCCCATTTGGCGGGTACAAGGCCAGTGGATTCGGAAGAGACTCTGGAATGCACGCTATCCAAAAGTATCTTCAAACTAAATCTGTTGTCATTCCTTTGGTTAACACTCCTTGGCTTTGA 1509 47.58 MDHNHCNGNSDSHIKIPKIKFTKLFINGQFVDSISGKTFETIDPRTEEVITTVAAGDKQDVDLAVKAAREAFDHGPWPRMSGAERGRIMMKLAELIDEHMEELAALDTIDAGKSFLMGKMVDIPGAANTLRYYAGAADKFHGEVLKMAKPLHGYTLLEPIGVVGHIIPWNFPTTMFWLKVSPALAAGCTMIVKPAEQTPLSALFYAHLAKLAGIPDGVLNVVTGYGPTAGSGIASHMDIDKVSFTGSTKVGRLVMQAASASNLKQVSLELGGKSPLLVFDDADLDKAVDLALLAIFYNKGEICVAGSRVLVQEGIYDEFVKKITEKVKSWVVGDPFDPKVKYGPQVDKKQMDKILKYIEHGKKEGATLVTGGKRIGEVGYYVEPTIFTNVKEDSLIAQDEIFGPVLSVIKFKTIEDGIRSANNTKYGLAAGIVTNSLDIANTVSRSIRAGTIWINCYFAFDPSCPFGGYKASGFGRDSGMHAIQKYLQTKSVVIPLVNTPWL 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23663262 23666919 + CePI673135_06g011710.1 Cec06g1171 205908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1171 502 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491(InterPro)
Cec06g1171 502 SUPERFAMILY ALDH-like 16 498 IPR016161 GO:0016491(InterPro)
Cec06g1171 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 461 IPR016163 GO:0016620(InterPro)
Cec06g1171 502 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491(InterPro)
Cec06g1171 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 490 IPR016162 GO:0016491(InterPro)
Cec06g1171 502 FunFam Aldehyde dehydrogenase, putative 464 490 - -
Cec06g1171 502 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 26 294 - -
Cec06g1171 502 Pfam Aldehyde dehydrogenase family 30 492 IPR015590 GO:0016491(InterPro)
Cec06g1171 502 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 22 494 - GO:0004029(PANTHER)
Cec06g1171 502 FunFam Aldehyde dehydrogenase3 272 461 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1171 Cec-Chr6:23663262 Cec06g1889 Cec-Chr6:32192958 7.50E-162 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1171 K12355 - csv:101219029 919.457