Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1177 ATGAGTTCGCCAAAAATTGGTCAAAATGTAAGCTTTAGTGCTTCGAGGCCATTTAGGCACAGGCTGAAATCGGATATGAAAGAGACGTTTTTCCCTGATGATCCGTTCAGACAGTTTCGAAATGAAAGAGGCGCAATACAAAGAGTGAAAAAGGGGTTCCAATATTTCATACCCATATTGGAATGGTTTCCTAAATACAATTTGAATATGTTTAAGTATGATTTGCTTGCTGGTATTACCATTACCAGCCTTGCTATTCCTCAAGGCATTAGTTATGCCAAACTCGCCGTCCTCCCTCCCATTATCGGCCTCTATTCAAGCTTCGTTCCGCCGCTTGTATACGCGGTGTTTGGAAGCTCAAAGCATCTGGCGGTTGGAACGGTGGCGGCTTGTTCGTTGCTGATATCGGAAATCATTGGAGAAGTGGCTTCGCCAGAAGAAGAACCCACATTGTACCTCCACTTGGTTTTCACCGCCACTTTTATCACCGGCATGATGCAGGCTGCGTTAGGCTTTCTAAGATTGGGAATTTTGGTGGATTTCTTATCGCACTCAACAATCCTTGGGTTTATGGGAGGAACGGCTGTGATCATTTCCCTTCAACAACTGAAAGGCATATTTGGACTGACTCATTTCACCTCTAAAACTGACGTTTATTCTGTACTTCATGCCGTTTTCTCCCTTAGAAAAGAGTGGAAATGGCAAAGTGCTGTGGTGGGCATCGTTTTCCTTGTATTCCTCCAGTTTACTCGCTACTTGAGAAACAGAAACCCGAAGCTATTTTGGGTGTCAGCAATGGCTCCCATGGTGACTGTAATAATAGGGTGTTTGTTTGCATATTTCATCAATGGAACTCAACATGGAATCTTAACTGTGGGTCATTTGAGCAAAGGAATAAACCCTCTTTCTATTCAATTCTTGAACTTCGACTCCAAATATCTATCAGCTGTAGTACAAGCTGGCTTGATCACTGGCCTTGTCGCTTTGGCTGAAGGAATAGCAATTGGTCGGAGCTTTGCAATAATGAAAAATGAACAAATTGATGGGAATAAGGAGATGATAGCCTTTGGTTTGATGAACATAGTGGGATCTTTCACTTCCTGCTACTTAACCACTGGGCCATTCTCAAAGACGGCAGTGAACTTCAATGCTGGGTGTAGAACAGCAATGTCAAACATAGTTATGGCAATCTTCATGGCTCTCACCCTCCTCTTTCTAGCTCCTCTCTTTAGCTACACACCTCTTGTTGCCCTTTCCGCCATTATCATGTCTGCCATGCTTGGTCTCATCAAATATGAAGAAATGTATCATCTTCTCAAAGTTGACAAATTCGATTTTTGCATTTGTATGGCGGCTTTCTTGGGTGTTGCCTTCTTAAGCATGGATGTTGGCATCATGCTTTCGGTGGGACTTGCTTTACTGAGAGCTCTTCTGTACATGGCTAGACCAGCTACTTGCAAGCTCGGGAAAATACCAAACTCCAGTTTGTACAGAGATGTGGAGCAGTATCCTAACGCAACCAGAGCCCATGGAATTATGGTTCTTCAACTTGGTTCCCCTGTTTATTATGCCAACTCCAACTACATCAGAGAAAGGATTTTCAGATGGGTTCGTGATGAGCAAGCCGATCCCAACTATGGATCCGTCGAACATGTACTCCTGGAGTTGAGCGGAGTTACCTCAATCGACATGACAGGGATTGAAACTCTAGTTGAAATCCGCAAATCATTACAAGCAAATGGAATCCAGATGGGAATTGTAAACCCAAGAATTGTAGTGATGGAGAAGATGATAGCTTCAGATTTCACAAACACAATCGGAAAAGAGAACATTTATTTGTCGGTGGATGAGGGAGTGGAAAGATGGAGAGGAATTTCAATATGCAATGGCGACGGTTTATCTAAATATAATGTAATTCATGTGTTTATTCACGAGCTTCAACTTCTTCGAGCTCTCAGATTGGGTCTAAACTCCTGGCACAACGACGCCATGCCCAATGTCAAGCACAACGCTTTTTCCGAAATGTTGCATTTTAAGCAACAATGCGACGATCCGAAGAATGACGGAAAAATAAAACGCGCATGA 2085 43.02 MSSPKIGQNVSFSASRPFRHRLKSDMKETFFPDDPFRQFRNERGAIQRVKKGFQYFIPILEWFPKYNLNMFKYDLLAGITITSLAIPQGISYAKLAVLPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLISEIIGEVASPEEEPTLYLHLVFTATFITGMMQAALGFLRLGILVDFLSHSTILGFMGGTAVIISLQQLKGIFGLTHFTSKTDVYSVLHAVFSLRKEWKWQSAVVGIVFLVFLQFTRYLRNRNPKLFWVSAMAPMVTVIIGCLFAYFINGTQHGILTVGHLSKGINPLSIQFLNFDSKYLSAVVQAGLITGLVALAEGIAIGRSFAIMKNEQIDGNKEMIAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCRTAMSNIVMAIFMALTLLFLAPLFSYTPLVALSAIIMSAMLGLIKYEEMYHLLKVDKFDFCICMAAFLGVAFLSMDVGIMLSVGLALLRALLYMARPATCKLGKIPNSSLYRDVEQYPNATRAHGIMVLQLGSPVYYANSNYIRERIFRWVRDEQADPNYGSVEHVLLELSGVTSIDMTGIETLVEIRKSLQANGIQMGIVNPRIVVMEKMIASDFTNTIGKENIYLSVDEGVERWRGISICNGDGLSKYNVIHVFIHELQLLRALRLGLNSWHNDAMPNVKHNAFSEMLHFKQQCDDPKNDGKIKRA 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23942965 23947501 + CePI673135_06g011770.1 Cec06g1177 205914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1177 694 Pfam STAS domain 503 617 IPR002645 -
Cec06g1177 694 CDD STAS_SulP_like_sulfate_transporter 503 615 - -
Cec06g1177 694 ProSitePatterns SLC26A transporters signature. 100 121 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cec06g1177 694 SUPERFAMILY SpoIIaa-like 505 621 IPR036513 -
Cec06g1177 694 ProSiteProfiles STAS domain profile. 502 622 IPR002645 -
Cec06g1177 694 FunFam Sulfate transporter 31 482 624 - -
Cec06g1177 694 NCBIfam sulfate permease 58 617 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cec06g1177 694 Gene3D STAS domain 482 624 IPR036513 -
Cec06g1177 694 PANTHER SULFATE TRANSPORTER 45 620 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec06g1177 694 Pfam Sulfate permease family 71 452 IPR011547 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1177 Cec-Chr6:23942965 Cec09g0705 Cec-Chr9:6255367 1.50E-200 dispersed
Cec06g1176 Cec-Chr6:23912638 Cec06g1177 Cec-Chr6:23942965 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1177 K17471 - csv:116402148 1112.83