Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1205 ATGGCTGCAGTTTTTTACTTTACCACCCGTCTCCCATTTTTCCTAATTTCATTTTCCCTGCTTCTTCTTCTTCTTCTTCTTCATCTTCATTCTGTCCAGTCTGAGCCCACCGCCGACAAGGCAGCTCTTCTCGATTTCTTGAACAAAACCCCTCATGAGAGTCGCCTTCAATGGAATGCTTCCGCCTCTGCCTGTACTTGGGTTGGAGTTGTCTGTGATGCGACTCAGTCGTTTGTTTTTGCTCTCCGGTTACCTGGCGTGGGGCTTGTCGGTCCGATTCCGGTTAATACGCTAGGTCGGTTGAATCGGCTCCGAGTTCTCAGTCTCCGGTCGAATAGAATCTCTGGGGAGTTGCCGGCGGATTTTTCTAATTTGGGATTTCTTCGTAGTCTTTATCTTCAGGACAACGAGCTTTCCGGGGATTTTCCGGTGAGTGTGACTCAGTTGACTCGGTTGACTCGACTTGATCTCTCGTCCAACAATTTCTCTGGTTCGATTCCGTTTTCGGTGAATAATCTGACCCATTTGACTGGGCTTTTCTTGGAGAATAATGGGTTTTCGGGTTCTCTGCCGAGTATTCCTGCGGTTGCGACTAGTCTCACGGGATTCAATGTATCGAATAATAAGCTCAATGGATCTATTCCCGAAACCTTATCGAAATTCTCTGCTTCATCTTTCGCCGGAAATTTAGCGCTCTGCGGTGGTCCATTGCCGTCGTGCAACCCGTTTTTTCCCTCCCCTGCTCCATCGCCGACGTCAGCCGTGAAACCCCCACAAGTTCCCGTCGAGAAGAAGTCGAAAAAGCTCTCCATCGCTGCCATTGTCGGAATTGTCGTCGGCGCTGCTTTCTTTGCGTTTATATTGCTGTTTTTGCTCCTGTTTTGTCTCCGGAAGCGCGAGCAGGGGCAGCCGGCGAAGCCGCCGACTACGGTGGTTACTACTCGATCTGTTCCGGCGGAGGCAGGTACATCGTCTTCGAAAGACGACATCACCGGGGGATCAGTGGATACAGAGAAAAACAGATTAGTGTTCTTCGAAGGTGGGGTTTACAGCTTCGATTTGGAGGACTTGTTGAGAGCTTCGGCGGAGGTTTTAGGAAAAGGAAGCGTCGGGACGTCGTACAAGGCGGTGCTGGAAGAAGGAACCACCGTGGTAGTGAAGAGATTGAAAGATGTGGTGATGACGAAGAAGGAATTCGAAACGCAAATGGAAGCTCTGGGAAATGTGAAACATGAAAATGTGGTTCCTCTCAGAGCTTTCTACTTTTCCAGAGATGAGAAATTGCTTGTTTCCGATTACATGGCCGCCGGCAGCCTTTCTTCTTCCCTTCACGGAAGCAGAGGATCCGGCCGTACGCCACTTGATTGGGACAACCGGATGAAAATCGCATTAAGCGCAGCAAGAGGATTGGCTCACCTCCACGTGTCGGGAAAGCTCGTCCACGGCAATATCAAATCGTCGAACATCCTCCTCCGCCCCAACCACGACGCCGCCGTCTCCGACTTCGGTTTGAACCCTCTCTTCGGCGCTTCGACGCCGCCCAACCGGATCGCCGGGTATCGCGCGCCGGAGGTTGTTGAAACCCGAAAGGTCACTTTCAAGTCCGACGTGTACAGTTTTGGCGTGTTGTTGTTGGAGCTTCTCACCGGGAAATCACCAAATCAAGCGTCGTTGGGTGAAGAAGGGATTGATCTTCCGCGGTGGGTCCAGTCGGTGGTCAGAGAGGAATGGACGGCGGAGGTTTTTGATGTGGAGTTAATGAGGTACCACAATATTGAAGAAGAGATGGTTCAGCTTTTACAAATTGCCATGGCCTGCGTCGCCACCGTGCCGGACCAGCGGCCGTCGATGCAGGAGGTGGTTCGTATGATTGAGGATTTGAACCGGGTGGAGACCGACGACGGATTACGGCAGTCGTCCGATGACCCATCTAAAGGATCGGACGGCCAGACGCCACCGCAAGAGTCCAGAACCACCCCACACGGAGCTGGCGGACCACCGTAG 2004 52.1 MAAVFYFTTRLPFFLISFSLLLLLLLLHLHSVQSEPTADKAALLDFLNKTPHESRLQWNASASACTWVGVVCDATQSFVFALRLPGVGLVGPIPVNTLGRLNRLRVLSLRSNRISGELPADFSNLGFLRSLYLQDNELSGDFPVSVTQLTRLTRLDLSSNNFSGSIPFSVNNLTHLTGLFLENNGFSGSLPSIPAVATSLTGFNVSNNKLNGSIPETLSKFSASSFAGNLALCGGPLPSCNPFFPSPAPSPTSAVKPPQVPVEKKSKKLSIAAIVGIVVGAAFFAFILLFLLLFCLRKREQGQPAKPPTTVVTTRSVPAEAGTSSSKDDITGGSVDTEKNRLVFFEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVMTKKEFETQMEALGNVKHENVVPLRAFYFSRDEKLLVSDYMAAGSLSSSLHGSRGSGRTPLDWDNRMKIALSAARGLAHLHVSGKLVHGNIKSSNILLRPNHDAAVSDFGLNPLFGASTPPNRIAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMACVATVPDQRPSMQEVVRMIEDLNRVETDDGLRQSSDDPSKGSDGQTPPQESRTTPHGAGGPP 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24677464 24679911 + CePI673135_06g012050.1 Cec06g1205 205942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1205 667 ProSiteProfiles Protein kinase domain profile. 359 627 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1205 667 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 434 638 - -
Cec06g1205 667 MobiDBLite consensus disorder prediction 306 331 - -
Cec06g1205 667 MobiDBLite consensus disorder prediction 628 667 - -
Cec06g1205 667 Pfam Leucine Rich Repeat 199 220 IPR001611 GO:0005515(InterPro)
Cec06g1205 667 Pfam Leucine Rich Repeat 103 125 IPR001611 GO:0005515(InterPro)
Cec06g1205 667 Pfam Leucine Rich Repeat 151 173 IPR001611 GO:0005515(InterPro)
Cec06g1205 667 FunFam Probable inactive receptor kinase RLK902 36 194 - -
Cec06g1205 667 Gene3D Ribonuclease Inhibitor 195 243 IPR032675 -
Cec06g1205 667 MobiDBLite consensus disorder prediction 302 333 - -
Cec06g1205 667 MobiDBLite consensus disorder prediction 642 658 - -
Cec06g1205 667 Pfam Leucine rich repeat N-terminal domain 38 73 IPR013210 -
Cec06g1205 667 Gene3D Transferase(Phosphotransferase) domain 1 434 645 - -
Cec06g1205 667 SUPERFAMILY Protein kinase-like (PK-like) 363 624 IPR011009 -
Cec06g1205 667 Gene3D Ribonuclease Inhibitor 37 194 IPR032675 -
Cec06g1205 667 Gene3D Phosphorylase Kinase; domain 1 328 433 - -
Cec06g1205 667 FunFam pollen receptor-like kinase 1 329 433 - -
Cec06g1205 667 SUPERFAMILY L domain-like 49 221 - -
Cec06g1205 667 PANTHER OS05G0588300 PROTEIN 20 634 IPR050994 -
Cec06g1205 667 Pfam Protein tyrosine and serine/threonine kinase 363 623 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1205 Cec-Chr6:24677464 Cec10g1964 Cec-Chr10:34432659 7.10E-91 dispersed
Cec11g0278 Cec-Chr11:3025179 Cec06g1205 Cec-Chr6:24677464 1.90E-221 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72083 PF00069 Pkinase 5.90E-37 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1205 - - - 0.0