Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1282 ATGCAGAGCTTTGTGTGCCAATGGCGGTGTCAGTGTGGGAATGTCAACATTGCAGTGTCGCGAGCGATCAAGACTATACAACCTGAAAAGATCTATGAAAGGTCTACCGTTGAGTCTTATTACAAGGCTGATCCCACCATTGCTGCTGGCTTGCTTAGGCTTCATTTTCACGATTGTTTTGTTCAGGGATGTGATGGTTCAGTATTGATAATGGATGAAAATGCTGAAATAAATGAAGGGCCAAATATGGGGTTAAGAGGCTTTGAAGTAGTTGATGATGCAAAATCCCAACTCGAAAGTTTGTGTCCTGGTGTTGTTTCTTGTGCAGATATTCTTGCTTTGGCTACTCGTGATGCTGTAGACTTGAGTGATGGTCCAAGTTGGTCTGTGCCCACGGGCAGAAGGGACGGGACGATTTCTATGCGTTTCCAGGCGGAAGATCTTCCTTCTCCATTTGAGCCCATCGATAACCACATACAAAAGTTTGCAGAGAAAGGCCTTACTGAAGAAGATCTTGTAACTCTAGTTGGTGCTCACACGATTGGGCAAACGGATTGCCAGCTATTCAGTTACCGTCTACAGAACTTCACAAGCACAGGGAATGCAGACCCAACCATAAGCCCATCGTTCTTGACTGAACTGAGAAGCCTGTGCCCTTTGGATGGAGATCCATTCAGAGGAGTGGCCATGGACAAGGGCAGCCAGTTGAAATTCGACAACAGTTTTTACAAGAACTTGATAGATGGGAATGGGGTTTTGGAGTCTGACCAGAGACTTTGGAGCCACCCTTCAACCAGAGACATTGTGAAGAGATATGCTGGGAATTTAAGGGGATTGTTGGGCCTTAGATTTAACTATGAGTTTAAAAAAGCTATGGTTAAGTTGAGTAGCATTGGTGTTAAGACTGGCACGCAAGGGGAGATTAGAAAAGTGTGTTACCAGTTCAATAAGCAGTGA 957 44.83 MQSFVCQWRCQCGNVNIAVSRAIKTIQPEKIYERSTVESYYKADPTIAAGLLRLHFHDCFVQGCDGSVLIMDENAEINEGPNMGLRGFEVVDDAKSQLESLCPGVVSCADILALATRDAVDLSDGPSWSVPTGRRDGTISMRFQAEDLPSPFEPIDNHIQKFAEKGLTEEDLVTLVGAHTIGQTDCQLFSYRLQNFTSTGNADPTISPSFLTELRSLCPLDGDPFRGVAMDKGSQLKFDNSFYKNLIDGNGVLESDQRLWSHPSTRDIVKRYAGNLRGLLGLRFNYEFKKAMVKLSSIGVKTGTQGEIRKVCYQFNKQ 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25969115 25971990 - CePI673135_06g012820.1 Cec06g1282 206019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1282 318 Pfam Peroxidase 34 275 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 ProSitePatterns Peroxidases active site signature. 48 59 IPR019794 GO:0004601(InterPro)
Cec06g1282 318 Gene3D Peroxidase, domain 2 149 295 - -
Cec06g1282 318 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 PRINTS Haem peroxidase superfamily signature 124 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 PRINTS Haem peroxidase superfamily signature 106 123 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 PRINTS Haem peroxidase superfamily signature 171 186 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 PRINTS Haem peroxidase superfamily signature 48 62 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 171 181 IPR019793 -
Cec06g1282 318 FunFam Peroxidase 149 295 - -
Cec06g1282 318 SUPERFAMILY Heme-dependent peroxidases 34 316 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 PANTHER PEROXIDASE 25-RELATED 34 312 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cec06g1282 318 ProSiteProfiles Plant heme peroxidase family profile. 34 316 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 CDD secretory_peroxidase 34 312 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec06g1282 318 PRINTS Plant peroxidase signature 124 139 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 PRINTS Plant peroxidase signature 245 262 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 PRINTS Plant peroxidase signature 105 115 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 PRINTS Plant peroxidase signature 229 244 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 PRINTS Plant peroxidase signature 86 99 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 PRINTS Plant peroxidase signature 170 182 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 PRINTS Plant peroxidase signature 50 70 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g1282 318 Gene3D - 34 316 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1282 Cec-Chr6:25969115 Cec09g1656 Cec-Chr9:30236934 1.20E-96 dispersed
Cec06g1280 Cec-Chr6:25954766 Cec06g1282 Cec-Chr6:25969115 2.30E-119 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1282 K00430 - csv:101214998 536.954