Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1382 ATGGCATTTGATCAGAACGCAATTCCCACAGGCTTGCGGCCTTTAAATGTAGCTAGAACTTTAGTTGAAGATCCCCATTTAACCCCGGTCGCTTCTACTGGTCGAAACCCGCAAAGGTTTACCCCCCAGCATCCCTGCGACGTTGCCAGTGCAGACACTGTGCCCGTTCCTGGTAAGGGGAACGTCTCTGATATAGGATTTGTTGACCTAGGATATCGAAATGTGGTTGCTGGTGTTACTGCATGGTGCCCTCGAATGCCTCCTCCCTTTACACATACTGCAACAATTCCTGCCGTAAGGTTTGGTTACTGCTCTGATCTGAATGTCATGGGCAATCGTGGTGGTGCCAATGCTGTTGAGCTTGCTAGCAGTTGCATGACAGTTGGGATTAATCATAGTACAAATTCGAGTCATCGATTTGGGGGAGGTGGCTTGGAATTTGTAAGCAATAATATCTCAATGCGGTCTGGAGATAGTGCCAATTTATCCAATAAGGTAACTGCCAATGGTGATCAGATTAATAGTGATAGTACTTCTGGATTTAGCTCCCACTTGAGGAATTCGGTTGATGGGAGTGCGGTTGATCAAGTGAGCGAGGAGGGTGGAGATGGTTCCATTTCGAAAAAGAAAGTTAAGTTTATGTGCAGTTTTGGTGGCAAGATTTTTCCTAGACCAAGTGATGGTATGTTGAGATACATTGGAGGCCAAACAAGGATTATAAGTGTTAGGAGAGACGTGACTTTCAATGAGCTTGTACGAAAGATGGTTGATACCTGTGGGCAGGCTGTGGTTATAAAGTATCAGCTCCCCGACGAGGATCTTGATGCTTTAATATCTGTTTCATGTCCTGATGATCTTGATAATATGATGGATGAGTATGAGAAGCTGGTTGAGAGATCTTCAGATGGATCGGCTAAATTAAGGATGTTTCTGTTCTCTGCTTCAGAACTTGACTCTTCAGGTATGGTGCAATTTGGCGATTTGCACGATAGTGGGCAGAGATATGTTGAAACAGTGAATGGGATGTTTGATGGCGTTGGTGGCCGTATTACAAGGAAAGGGAGCTTTGCAAGTGCTACCTCAACTCAAAATTCTGACTTAAGTGGGACTGAGGCGATGGATATCGCAAATAATGATCTAGGGGGGGTTGTGAGTGGGCCTCCATCCACAACACTGTCCTTACCTGGAGGAAATTTAGGTACTGCAGTTGCTATTGGCCCTGGATTAGTGAAAGTAGATCCTGTCTCTGCAGTTTTTGTAGACGCCTCTGCTGTTCCATCAAGTATTCCTGTGCTTAACTCTGTTCCTCCTGAAGCTTCTTCGCAGCCTGAGGCGGAGTTGGGAAGGTCTGTGCCTGTTACTCTAATGCAGCAGCAACCAGGTATTGACTTTCCTCCACCTGTGTCTCAATTGCAGCCTACTGGTGATCCTCGGCAAGCAGCATGTGTGGACTTTGTACAATTTCGTCCACAACTTGGCTTTTCAAACTCCCATCATTTAGGGGCATCTGGGTCTATGTTTATACAACAGCCAAATACTCTTGGAATTACCCCTAATCAGTTTGTCCCTACAGTTCACATGACAATGGCTTCCTCTTCTTCTCACCTCAGTACTATGCCAAATACCTATCAATCGTTGGTTCAATATCCACAATCCCAGATGGATTATTTTTCCAACGCAAGCACATTTGGTCCAAGGTTTGTCCAGCTATCTGCAGAACAAGGCTACAACTCACTCCAGGTTCCAGCTCCTCCAGTATCAGTAGGGGTTGGGTTTGGTTTACATCAGGTACCACAGTCTGATCAGACAGGTACGTCTGATGAATTGGTATCCCATCATCGGGCAACTTTTTCTGAGAAGATCGAGAGGTTGGATGGCTGTTACTTCTGCCAGAAAGCAGTGCCACATGCTCATTCCAATTCTCCGTTGCAGGATCAAAGAGAAAATTTGACGAACCCTGTATCTGATTCAAAGTTTTCGTATTACAGTCATCACCCTGAAGATCATTTAACAGCCCATCCAATGAAAAATACTACAGAAACTGGAGCTTTGAGGCAACAAACTACTGAACATGGTGTTGGAATGCAAACCAGGATCTTTAATCCCATGGATCCAGAAGTTGAAAAACCTTCAGTGGAAGCTATTAGCTTCCCACATCGTATTGAAGGTCAACATGAGAATGACAACACTCTTAAAGATCAGCATAATCTTGATCATGGTAGGATCTCAGCTCTGCAGGGTGCTCTTGGGAGGCAAGGTGATATTCGGTCACCCCATGTTGCTGTTGTAGAACAGATTTGTCAGTCTGGGGAAGTTGATACTCTCCAGCACCACTATGTAGCTGTAGAGAATCAGTTCCGTCCAAATTTAGTCCTGGATAAACACGATGTTTACTTTGTAGGTGCTCCTATCCTTGCTTCAGAGTACAACACTCACGAAAATCCAAATGAGTACTCTAATAGTCGTCATGGCATTATTCCAAACCAAAATGCCACCCACACTGGAGTTTGTTACGACCATCTCAGACCAATTGTTGGAAATTTGGAAAGTTCATGTATATGCCCAACTGATATTTGTGCTAATTTGGATCACTGCAAATCACCCGTTGAGAGAACTAGGAAGGAGGACAATTTTGGCAGCTGTTCACAACCAGTCTCAGAGAGGGAAGTTCTACTAGATAACAACTTTGTAAAGCCAATGGTGGTTCTCGACCCAAATAACGTAAAGCCAACTACTTTTGCTTGCTCTTCATCAGAGGTTCCCTATTTGATGAATGAACGACCTGTTGAGTCCAGTGAAGTGGCACAACCTCCTGTCAGGGGCTCTCCCGGAACATTACCACAAGCTGAAAATGGGATGCAACATTTAGAATCCAATGAAGTCTGTCATAGAAGAAATCCCCACTTATTTGACATGAAGACTGAACATATAAACAATGGAGTCCCTGTTTCTGCTGAGTGGAAGGAGGACACTTCTCTATTGGAAACTAGGATGGTATCTGGTGATGTTGAATCCGTTTCTTTGCCTATCAGGACTGGAAATATGCAGGACACTGCAAATTCACTCTTCAGTAATCAGGATCCTTGGAACTTGCAGCATGATGCTCATTTTTTGCCGCCTAGACCAACTAAAATTCAACCGAGGAATGAAGCCCTTGCCTCCAGGGAACCCTTGACAGAGAGTCCTTTCAGGAATATTGGTGAACCAAATGTGGAAACAATTCTGGATGACTCATTGGTTAACTCAAACAAGGGTTCTTCAGAGGAACAAATTAGGAAAGATCTTCAAGCTGTTGCTGAGGGTGTAGCTGCTTCTGTTCTTCAGTCGGCTCAATCCTCCAGCTCTGAATTGCATGAAAGAATTGATCCAGTTTGTGAGACTATCAGCGAAGGAGATGTTCAAAATAATGATGATGGCAGGACAAGACATTCAGAAAAACCAAACCTTGGTTTTCCAATGTCAGAAGGCTTTGGCCGCTTGCAGGTAATAAAGAATAGTGACCTTGAAGAACTAAGAGAATTAGGTTCTGGCACTTTTGGCACTGTTTATCATGGAAAATGGAGGGGGACTGATGTTGCTATCAAACGAGTCAATGATAGGTGTTTTGCTGGGAAACCATCTGAACAAGATCGCATGAGAGAGGACTTTTGGAATGAAGCAATTAAGCTTGCTGATTTGCACCACCCAAATGTGGTTGCTTTTTACGGTGTTGTGCTTGATGGCCCTGGGGGCTCTGTGGCAACAGTAACAGAATATATGGTTAATGGCTCGCTCAGAAATGCTTTGTTGAAGAATGAAAGGAGTCTTGACAAGCGTAAGCGTCTCTTGATTGCTATGGATGCAGCTTTTGGAATGGAATACCTGCACAGAAAGAATATAGTGCACTTTGATTTGAAAAGTGATAATCTGCTGGTCAACCTTCGAGATCCTCATCGCCCAATATGCAAGGTTGGTGACTTGGGCCTATCGAAGGTGAAACGTCAGACATTGATATCAGGTGGTGTGCGGGGAACACTTCCATGGATGGCACCCGAGCTTTTGAATGGGAGCAGCAATATGGTGTCCGAGAAGGTTGATGTGTTCTCCTTTGGTATTGTCTTGTGGGAGCTCCTCACTGGAGAAGAGCCCTACGCAAATTTGCATTATGGGATTATCATAGGTGGCATAGTAAGCAACACGTTGCGACCTGAAGTTCCAGAATCTTGTGATCCAGAATGGAGGTCACTGATGGAGAGATGCTGGTCATCTGAGCCGTCAGAGAGGCCAAGCTTCACTGAAATTGCACATGAATTGCGGTCCATGGCTACTAAGGCATATTGCTTCGCTGATGGCCCTTTCCTCTTCGCCTATGTTCCAGAATTGCGAAATACAACCTTGTTCTTTCCCAAACCCTTCACCAAACTAAAAGAAACAGTTGGGATGTTGAAGATGTATGTGTTAGTTCCAAGCATGTTTCATTAA 4461 44.38 MAFDQNAIPTGLRPLNVARTLVEDPHLTPVASTGRNPQRFTPQHPCDVASADTVPVPGKGNVSDIGFVDLGYRNVVAGVTAWCPRMPPPFTHTATIPAVRFGYCSDLNVMGNRGGANAVELASSCMTVGINHSTNSSHRFGGGGLEFVSNNISMRSGDSANLSNKVTANGDQINSDSTSGFSSHLRNSVDGSAVDQVSEEGGDGSISKKKVKFMCSFGGKIFPRPSDGMLRYIGGQTRIISVRRDVTFNELVRKMVDTCGQAVVIKYQLPDEDLDALISVSCPDDLDNMMDEYEKLVERSSDGSAKLRMFLFSASELDSSGMVQFGDLHDSGQRYVETVNGMFDGVGGRITRKGSFASATSTQNSDLSGTEAMDIANNDLGGVVSGPPSTTLSLPGGNLGTAVAIGPGLVKVDPVSAVFVDASAVPSSIPVLNSVPPEASSQPEAELGRSVPVTLMQQQPGIDFPPPVSQLQPTGDPRQAACVDFVQFRPQLGFSNSHHLGASGSMFIQQPNTLGITPNQFVPTVHMTMASSSSHLSTMPNTYQSLVQYPQSQMDYFSNASTFGPRFVQLSAEQGYNSLQVPAPPVSVGVGFGLHQVPQSDQTGTSDELVSHHRATFSEKIERLDGCYFCQKAVPHAHSNSPLQDQRENLTNPVSDSKFSYYSHHPEDHLTAHPMKNTTETGALRQQTTEHGVGMQTRIFNPMDPEVEKPSVEAISFPHRIEGQHENDNTLKDQHNLDHGRISALQGALGRQGDIRSPHVAVVEQICQSGEVDTLQHHYVAVENQFRPNLVLDKHDVYFVGAPILASEYNTHENPNEYSNSRHGIIPNQNATHTGVCYDHLRPIVGNLESSCICPTDICANLDHCKSPVERTRKEDNFGSCSQPVSEREVLLDNNFVKPMVVLDPNNVKPTTFACSSSEVPYLMNERPVESSEVAQPPVRGSPGTLPQAENGMQHLESNEVCHRRNPHLFDMKTEHINNGVPVSAEWKEDTSLLETRMVSGDVESVSLPIRTGNMQDTANSLFSNQDPWNLQHDAHFLPPRPTKIQPRNEALASREPLTESPFRNIGEPNVETILDDSLVNSNKGSSEEQIRKDLQAVAEGVAASVLQSAQSSSSELHERIDPVCETISEGDVQNNDDGRTRHSEKPNLGFPMSEGFGRLQVIKNSDLEELRELGSGTFGTVYHGKWRGTDVAIKRVNDRCFAGKPSEQDRMREDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALLKNERSLDKRKRLLIAMDAAFGMEYLHRKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSNMVSEKVDVFSFGIVLWELLTGEEPYANLHYGIIIGGIVSNTLRPEVPESCDPEWRSLMERCWSSEPSERPSFTEIAHELRSMATKAYCFADGPFLFAYVPELRNTTLFFPKPFTKLKETVGMLKMYVLVPSMFH 1486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27330117 27338190 + CePI673135_06g013820.1 Cec06g1382 206119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1382 1486 SUPERFAMILY CAD & PB1 domains 226 318 - -
Cec06g1382 1486 Gene3D Phosphorylase Kinase; domain 1 1161 1255 - -
Cec06g1382 1486 SMART PB1_new 225 314 IPR000270 GO:0005515(InterPro)
Cec06g1382 1486 CDD PB1_UP2 214 312 - -
Cec06g1382 1486 ProSiteProfiles Protein kinase domain profile. 1168 1432 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1382 1486 SMART serkin_6 1168 1439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1382 1486 PRINTS Tyrosine kinase catalytic domain signature 1358 1380 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1382 1486 PRINTS Tyrosine kinase catalytic domain signature 1402 1424 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1382 1486 PRINTS Tyrosine kinase catalytic domain signature 1250 1263 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1382 1486 PRINTS Tyrosine kinase catalytic domain signature 1287 1305 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1382 1486 Gene3D - 232 314 - -
Cec06g1382 1486 Gene3D Transferase(Phosphotransferase) domain 1 1256 1442 - -
Cec06g1382 1486 MobiDBLite consensus disorder prediction 1129 1151 - -
Cec06g1382 1486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1293 1305 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1382 1486 SUPERFAMILY Protein kinase-like (PK-like) 1159 1429 IPR011009 -
Cec06g1382 1486 Pfam PB1 domain 230 313 IPR000270 GO:0005515(InterPro)
Cec06g1382 1486 MobiDBLite consensus disorder prediction 163 186 - -
Cec06g1382 1486 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 230 314 - -
Cec06g1382 1486 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1256 1443 - -
Cec06g1382 1486 ProSitePatterns Protein kinases ATP-binding region signature. 1174 1205 IPR017441 GO:0005524(InterPro)
Cec06g1382 1486 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1161 1255 - -
Cec06g1382 1486 PANTHER SERINE-THREONINE PROTEIN KINASE 174 1434 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cec06g1382 1486 CDD STKc_MAP3K-like 1174 1431 - -
Cec06g1382 1486 Pfam Protein tyrosine and serine/threonine kinase 1170 1431 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1382 Cec-Chr6:27330117 Cec11g1300 Cec-Chr11:27014399 4.10E-139 dispersed
Cec06g1382 Cec-Chr6:27330117 Cec04g1129 Cec-Chr4:30890404 2.50E-48 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72089 PF07714 PK_Tyr_Ser-Thr 7.10E-60 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1382 - - - 0.0