Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g1438 | ATGCAGCAAGGTGATCAGACGGTTCTAAGCTTGAGACCTGGTGGCGGTCGACCTAGACTCCTTGGTCCTCGCTTCGACCTTTCATCTTCATCTTCTTCATCCTCTTCATCCTCTTTTGCCTTCGGTTCATTCTCCTCTGATCTCCCTACCCTCCGTCCCCATGCCGCTTCTTCCGCTTCCTTTTCTGTAAAGGCTGGAGATTCACGGTTTGAGGGTCGTGAGCGTGTTCGATATACCCGAGATCAGCTTTTGCAGCTTCGGGAGGCTGTGGAAGTTCCAGATGAAATTCTAAAAATTAAACGGGACATTGAAGTGGAAATTTTTGGCGAGGAACAAAGTTGGAGTCGTGGAGAGAGCAATCAACTCAATCAGTCTCAGAATCGCTATTCTGAGCCTGACAATCGTGACTGGCGTGGCCGCTCTGCCCAATTCTCTTCTCCTGGAGAGGAGAGGTCTAGGGAAACAAATCGAGACAGAGATTTTGGTAGTCATTTTGACTCTAGACAGCAAGATGCAAATCACTTGAATCGTCAAGATTCTAACTCATCTTGGACACGAACCACTTCTAACCAAGGGGGAGGACCTCCTGCATTAATCAAAGCTGAGGTACCATGGTCGGCTAGGAGAGGAAATCTCTCTGATAAGGATCGTGTCTTGAAGACTGTAAAAGGGATATTGAACAAGTTAACACCAGAAAAGTTTGATCTCCTTAAGGGTCAGCTAATTGACTCTGGAATCACCTCCGCTGATATTTTGAAGGATGTCATTTCACTGATTTTTGACAAGGCTGTTCTTGAGCCCACATTTTGCCCCATGTATGCTCAATTATGTTCCGATCTGAACCAGAAACTACCTCAATTTCCCTCTGATGAACCTGGTGGTAGGGAAATTACTTTCAAACGAGTCCTCTTAAACATATGTCAGGAGGCTTTTGAAGGTGCAGACAAGTTGAGGGAAGAGGTTAGGCAGATGACTGCCCCTGAACAAGAGAGCGAGCGCAGAGATAAAGACAGACTGGTGAAACTTCGTACTCTTGGAAATATTCGATTAATTGGAGAGCTTCTGAAGCAAAAGATGGTACCTGAGAAGATTGTCCACCACATTGTCCAGGAACTCCTAGGACCAGATAACAAAACCTGTCCAGCTGAAGAAAACGTTGAGGCCATCTGTCAATTTTTTAACACCATAGGTAAGCAGCTAGATGAGAACACTAAATCACGTCGTATTAATGACATGTACTTTGGCCGATTGAAAGAACTGACCACACACACTCAGTTGGCCCCACGATTGAAGTTCATGGTCCGTGATGTTCTTGATTTGCGTGCTAACAATTGGATTCCTAGGCGTGAGGAGGTTAAAGCCAAAACTATAAATGAAATACATTCAGAGGCAGAAAAAAATCTGGGACTACGTCCTGGTGCTACTATTAATATCAGAAATAGTCGCGTTGTGTCTGGTTCTCCTGGGAACACTAGCCCTGGGGGCTTTCCGATCAATCGACCTGGTTTTGGTGGCATGATGCCTGGCATGCCAGGAACCAGGAAGATGCCTGGTATGCCAGGAATGGATAATGACAATTGGGAGGTACCTAGGGCCCGACCTGTACCAAGGGGTGCAGACGTATCTGGTATCCAGCCTGCTGGACGTGGCCAGGCATCGTTGGTTGGCAAAACATCAACTTTGAATGCAAGGCTTCTGCCCCAGGGTACAGGTGGGCTCATTAGCAATAAGACTAGTGCTCTCTTGCAGGGTCAGGGTGCAGGTGCAGGTGCAGGTGCAAGTGCAGGTGGTTCTACCACTCGTCCCGTTAACTTTGGTCATGGGTTAGAGCCCTCTGGTCAGGTTCATAAACCTATTACGACAGCCACAGTCCTTTCACCTGCCGAGAGACCACAGGTTCCAACTGCATCTTTGAAACAAGATGATCTCAGAAAGAAAACTATCTCTCTTCTTGAAGAATATTTCAGTATCCGGCTATTGGATGAAGCTTTACAGTGTGTGGAAGAACTCATGTCACCAGCTTACCACCCCGAGGTTGTAAAAGAAGCCATTTCCTTGGCTCTAGAGAAAAGCCCACCATGTGTTGAAGCAGTTGTAAAGTTTCTGGACTATTTACTCTCCAGGAAGGTTTTTACAGCTAGTGACACTGAAACTGGATGTTTGCTATATGCTTCGGTGCTTGACGATGCAGGCATCGATTTGCCAAAAGCACCTGTCAATTTTGGTGAGATAATCGGAAAACTTGTAACATCCGGTGGTTTGGATTTTCAGGTGGTGAAAGAGGCCATTAAGAAGGTGGAAGATGACAGGTTCAGGAAAGATATATTTGATGCTGTCTTGAAGACTATTAGTTCTAATGTGTCTGGGCAAGGATTGTTGGACTCGTTGGCATCCGATATCGAGGACTGTCGAAGTCTGGCATATTAA | 2427 | 46.11 | MQQGDQTVLSLRPGGGRPRLLGPRFDLSSSSSSSSSSSFAFGSFSSDLPTLRPHAASSASFSVKAGDSRFEGRERVRYTRDQLLQLREAVEVPDEILKIKRDIEVEIFGEEQSWSRGESNQLNQSQNRYSEPDNRDWRGRSAQFSSPGEERSRETNRDRDFGSHFDSRQQDANHLNRQDSNSSWTRTTSNQGGGPPALIKAEVPWSARRGNLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQESERRDKDRLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDMYFGRLKELTTHTQLAPRLKFMVRDVLDLRANNWIPRREEVKAKTINEIHSEAEKNLGLRPGATINIRNSRVVSGSPGNTSPGGFPINRPGFGGMMPGMPGTRKMPGMPGMDNDNWEVPRARPVPRGADVSGIQPAGRGQASLVGKTSTLNARLLPQGTGGLISNKTSALLQGQGAGAGAGASAGGSTTRPVNFGHGLEPSGQVHKPITTATVLSPAERPQVPTASLKQDDLRKKTISLLEEYFSIRLLDEALQCVEELMSPAYHPEVVKEAISLALEKSPPCVEAVVKFLDYLLSRKVFTASDTETGCLLYASVLDDAGIDLPKAPVNFGEIIGKLVTSGGLDFQVVKEAIKKVEDDRFRKDIFDAVLKTISSNVSGQGLLDSLASDIEDCRSLAY | 808 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 27861612 | 27868010 | - | CePI673135_06g014380.1 | Cec06g1438 | 206175 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g1438 | 808 | MobiDBLite | consensus disorder prediction | 174 | 194 | - | - | |
Cec06g1438 | 808 | MobiDBLite | consensus disorder prediction | 113 | 130 | - | - | |
Cec06g1438 | 808 | Gene3D | - | 636 | 802 | - | - | |
Cec06g1438 | 808 | Gene3D | - | 210 | 445 | - | - | |
Cec06g1438 | 808 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Cec06g1438 | 808 | SMART | ma3_7 | 643 | 755 | IPR003891 | - | |
Cec06g1438 | 808 | FunFam | Eukaryotic translation initiation factor isoform 4G-2 | 210 | 445 | - | - | |
Cec06g1438 | 808 | MobiDBLite | consensus disorder prediction | 25 | 43 | - | - | |
Cec06g1438 | 808 | MobiDBLite | consensus disorder prediction | 112 | 204 | - | - | |
Cec06g1438 | 808 | SUPERFAMILY | ARM repeat | 212 | 446 | IPR016024 | - | |
Cec06g1438 | 808 | ProSiteProfiles | MI domain profile. | 642 | 764 | IPR003891 | - | |
Cec06g1438 | 808 | Pfam | MIF4G domain | 219 | 444 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cec06g1438 | 808 | SMART | if4_15 | 219 | 444 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cec06g1438 | 808 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 57 | 806 | IPR045208 | GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0016281(PANTHER) | |
Cec06g1438 | 808 | Pfam | MA3 domain | 643 | 755 | IPR003891 | - | |
Cec06g1438 | 808 | SUPERFAMILY | ARM repeat | 638 | 797 | IPR016024 | - | |
Cec06g1438 | 808 | MobiDBLite | consensus disorder prediction | 481 | 502 | - | - | |
Cec06g1438 | 808 | MobiDBLite | consensus disorder prediction | 150 | 173 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g0327 | Cec-Chr3:3712001 | Cec06g1438 | Cec-Chr6:27861612 | 7.20E-09 | transposed | |
Cec05g0339 | Cec-Chr5:2811979 | Cec06g1438 | Cec-Chr6:27861612 | 3.30E-53 | transposed | |
Cec06g0873 | Cec-Chr6:11147985 | Cec06g1438 | Cec-Chr6:27861612 | 2.30E-54 | transposed | |
Cec05g1792 | Cec-Chr5:29808294 | Cec06g1438 | Cec-Chr6:27861612 | 1.20E-280 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g1438 | K03260 | - | csv:101207520 | 1389.79 |