Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1557 ATGGCGGCCGGAGAAGAGGAGGTGGCGGCGGCGGCGGCGTCGGGAGTGGCCGGAAAGAAGGGTGGTGGGTTGCAGAAAAGTTACTTTGATGTGTTGGGGATTTGTTGTTCTTCGGAAATTCCAGTGATTGAGAATATATTGAAGGAGATTGAAGGGATTAAAGAGATTAGAGTGATTGTTGCTACAAGAACTGTCATTGTTCTTCATGATAATCTTCTTGTTTCTCAAACACAAATTGTTAAAGCCCTAAATCAAGCAAGATTTGAAGCGAACGTTAGAGCGTACGGAGATCAGAAAGATCACCGGAAAAAATGGCCGAGCCCGTATGCGGTGGCGAGTGGGATGTTGCTGCTGCTGTCGTTACTGAAATATGTGAATCCTATTTTCCGATGGGTAGCTTTAGCCGCCGTTGCCGCCGGAATCTGGCCCATTGTCCTCAAAAGCTTCGCCGCCGTTCGCCATCTCAGAATCGACATCAACATTCTTGCTTTAATTGCAGTGATCGGGACAATTGTGCTGAAGGATTATTTGGAAGCGGCCACCATCGTCTTCCTCTTCACCATCGCCGAATGGCTCGAGTCCAGAGCCGCCCACAAGGCGAACGCCGTCATGTCATCCCTTCTAAGCATCGCTCCTCAGAAAGCTGTTCTAGCCGACACCGGCGAAGTTGTCGGCGCCGACGAGGTCAAATTGGGGACTCTGCTGGCTGTGAAGGCCGGCGAAGACATTCCCATTGATGGAATCGTTGTGGAAGGAAAATGCGAAGTGGATGAGAAAACACTTACTGGTGAATCTTTCCCTGTTCCCAAACAGAAGAATTCCACTGTTTGGGCTGGTACCATTAATCTAAATGGCTATGTTACTGTAAAGACTACTGCGCTTGCTGAAGACTGTGTGGTGGCCAAAATGGCTAAGCTGGTTGAAGAGGCCCAAAACAATAAATCTAGGACTCAAAGGTTCATTGACAAATGTGCCAAATTCTATACTCCAGCTGTTATAATCATATCAACTTGCATAGTAGTGATTCCAATTGCTTTGAGACTTCCCAATCACAGCCATTGGTTTCACTTGGCCCTGGTTGTGTTAGTAAGCGCGTGTCCCTGTGCACTCATCCTTTCCACGCCTGTTGCGTCTTTCTGTGCACTTACTAAGGCAGCAACATCTGGTCTTTTAATTAAAGGAGGTGACTACCTTGAAACTCTTGGCAAAATTAAGATCATGGCCTTTGATAAAACTGGAACAATAACAAGAGGTGAATTTATGGTGACTGAATTTCAAGTTCTTGATAAGGACAATATAAGCTTAGACACATTGCTATATTGGGTGTCAAGCATTGAGAGCAAGTCCAGTCATCCAATGGCAGCTGCACTTGTTGACCATGGAAGATCACTATCCGTTGATCCCAAACCTGAAAATGTGGATGACTTTCAAAATTTTCCTGGAGAAGGTGTTTATGGGAGAATTGATGGGAAAGACATTTATATTGGAAATCGAAAAATTGCTACAAGAGCCAACTGTGCAACAGTCCCAGAGATCAAAGATGAAGCAAAGGATGGGAGGACTGTTGGATACATATTCTGTGGAGCTACTGCAGCTGGAATCTTTAGTCTATCTGATTCTTGCAGAACAGGAGCTAAGGAGGCCATGGATGAGCTTCGATCTCTCGGTATAAAAACAGCCATGCTCACAGGAGACTGTTCTGCAGCAGCCTTGCAAGCACAAAAAGAATTGGGAAAGGCTTTACAAACAGTTCATGCAGAACTTCTACCTGAAGACAAGACAAGACTCATCAATGACTTTAAAAAGGAGGGACCAACAGCTATGATTGGAGATGGTTTGAACGACGCCCCTGCCTTGGCCACAGCTGATATTGGTATATCAATGGGAATCTCAGGTTCAGCCCTTGCAATAGAAACTGGAGATGTAATTCTTATGACTAATGATATCAGGAAAGTTTCAAAAGCCATTCGACTTGCAAGAAGAGCTAATAATAAAGTAATTGAAAATTTGATTCTGTCGATTGCTCCTAGGATTGCTATACTTGGCCTAGCATTTGGTGGTCATCCACTTGTTTGGGCAGCAGTTCTTGCTGATGTCGGTGCCTGTGTGCTAGTTATCCTCAACAGTATGCTCCTGCTGCGAGGAACTGACGGACCCAAGGGGAAAAAAGCTGGCAAGTTTTCTGCTACTCACTGTTCCTCCAAACATAAATGCTGTGATGTTAGTAGCCATTCAGATGAATATAGTGGCCACACCCATGATCACGGGTGCGACAATCACAGTTCCCACTCTTCTAGACATCATCACCATCACCATCACCATGAGCACGAGGACTGCACCTCTCTCAAGAAAACTCATGATGGTTGTTTACCTCAGAACCATGCTTCCAAGTGTGTCTCCAGGTTGAAAAATTCAAGTTTATGCAAGAAAAGTAAACTTGTGGACTCAAGTTCTAAGGTAGATGGTTCTACCGGCAATGTAAACCTCTGTGAACATGATCACAGGTGCAACACTGACAGCTCCGACTCTTCTAGTCATCATCACCACCACCACCATCATCATCATGAGCACGAAGACTGTGGCTCTCTCAAGAAAACTCATGAAGGTTGCTTACCTCAGAACTGTGCTTCCAAGTGTGATTCCGGGATGAAGACTTCAAGTTCATGCAAGAAAAGTAAACTCGTGGAGTCAAGTTCTAAGGTAGATGATTCTGCAGGCAGTCTAAAACTGTGTGAACATGGACATGTCCATAACGACCAGCCTGCTGATCATGACCATCATGCTTATTCTTCGTGCGCACATCATGTCGAGAACAAACATTGCTCTCCAAAGATTACACAAGAGTTTTGCTCGTTTCAGAAGCGTGCATCAAATTCATGTGAGAAAATCAAGTGCACAAGCTCAGCTGCAACCCTTGATGGTTCTGCTGTCACTCTTGAGCTCCATGAAAGTGGATGTTGTTCTCATAATGACCAATCTGCTCAACATGATCATGACATCCAAACTCCCAAGTGTGATTTGGATGACAGCCACTCATCCAGTCCTGAGCATCATGTTGGTAATGGTTGTAGCTCTCAAAAGAACCATGAGCACTGCCACCAAGGAAGCTTCGACACTTCTGATTTCATCTTGGAATCCCATGAAAAGCACAGGAAAAATTGCAGTGGACCTTGTAAATCAAAATCAATAAGCGGGTGCACAGACGATGAATGCAGGGAAAAGGTTGAAATGATAGATGATTGCGCTGAAGCAAACAGGCACCACAAAACGAAACAACATCATTGCGATACTCATTTGAGTCTTCAAAATGAAGAGGTTCATCCTCATTGTAAGGCATCAAATGGAGATAATAATGGAGCAATCAACAATACAGTTAATATCGAGCTCGAAGCACACCATTCAAACCCAGAATGCCCCAGCACTTGTAACAAGGCTTCGGAAAACAATGGGACAAACAACTGTAAAAGCTGCAAAAGGGGAAGCTCACAACTCAAAATTGGAAAATCTTGTGCAGGTTTGGATAAGAGAAAAATGGGTGGGTGTTGTAAGAGCTACATGAAGGAGTGTTGTAGGAAGCATGGCGATATCAGAATGGCGGTCCGAGGAGGCTTAAATGAAATTATTATAGAATAG 3633 44.43 MAAGEEEVAAAAASGVAGKKGGGLQKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVLHDNLLVSQTQIVKALNQARFEANVRAYGDQKDHRKKWPSPYAVASGMLLLLSLLKYVNPIFRWVALAAVAAGIWPIVLKSFAAVRHLRIDINILALIAVIGTIVLKDYLEAATIVFLFTIAEWLESRAAHKANAVMSSLLSIAPQKAVLADTGEVVGADEVKLGTLLAVKAGEDIPIDGIVVEGKCEVDEKTLTGESFPVPKQKNSTVWAGTINLNGYVTVKTTALAEDCVVAKMAKLVEEAQNNKSRTQRFIDKCAKFYTPAVIIISTCIVVIPIALRLPNHSHWFHLALVVLVSACPCALILSTPVASFCALTKAATSGLLIKGGDYLETLGKIKIMAFDKTGTITRGEFMVTEFQVLDKDNISLDTLLYWVSSIESKSSHPMAAALVDHGRSLSVDPKPENVDDFQNFPGEGVYGRIDGKDIYIGNRKIATRANCATVPEIKDEAKDGRTVGYIFCGATAAGIFSLSDSCRTGAKEAMDELRSLGIKTAMLTGDCSAAALQAQKELGKALQTVHAELLPEDKTRLINDFKKEGPTAMIGDGLNDAPALATADIGISMGISGSALAIETGDVILMTNDIRKVSKAIRLARRANNKVIENLILSIAPRIAILGLAFGGHPLVWAAVLADVGACVLVILNSMLLLRGTDGPKGKKAGKFSATHCSSKHKCCDVSSHSDEYSGHTHDHGCDNHSSHSSRHHHHHHHHEHEDCTSLKKTHDGCLPQNHASKCVSRLKNSSLCKKSKLVDSSSKVDGSTGNVNLCEHDHRCNTDSSDSSSHHHHHHHHHHEHEDCGSLKKTHEGCLPQNCASKCDSGMKTSSSCKKSKLVESSSKVDDSAGSLKLCEHGHVHNDQPADHDHHAYSSCAHHVENKHCSPKITQEFCSFQKRASNSCEKIKCTSSAATLDGSAVTLELHESGCCSHNDQSAQHDHDIQTPKCDLDDSHSSSPEHHVGNGCSSQKNHEHCHQGSFDTSDFILESHEKHRKNCSGPCKSKSISGCTDDECREKVEMIDDCAEANRHHKTKQHHCDTHLSLQNEEVHPHCKASNGDNNGAINNTVNIELEAHHSNPECPSTCNKASENNGTNNCKSCKRGSSQLKIGKSCAGLDKRKMGGCCKSYMKECCRKHGDIRMAVRGGLNEIIIE 1210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29140392 29146769 + CePI673135_06g015570.1 Cec06g1557 206294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1557 1210 NCBIfam heavy metal translocating P-type ATPase 159 712 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Cec06g1557 1210 CDD P-type_ATPase_HM 109 711 - -
Cec06g1557 1210 NCBIfam cadmium family heavy metal-translocating P-type ATPase 159 714 - -
Cec06g1557 1210 PRINTS H+-transporting ATPase (proton pump) signature 641 666 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec06g1557 1210 PRINTS H+-transporting ATPase (proton pump) signature 609 625 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec06g1557 1210 ProSiteProfiles Heavy-metal-associated domain profile. 25 91 IPR006121 GO:0046872(InterPro)
Cec06g1557 1210 Pfam haloacid dehalogenase-like hydrolase 404 623 - -
Cec06g1557 1210 Gene3D - 419 541 IPR023299 GO:0000166(InterPro)
Cec06g1557 1210 Gene3D - 197 311 - -
Cec06g1557 1210 MobiDBLite consensus disorder prediction 750 777 - -
Cec06g1557 1210 PRINTS P-type cation-transporting ATPase superfamily signature 257 271 - -
Cec06g1557 1210 PRINTS P-type cation-transporting ATPase superfamily signature 633 645 - -
Cec06g1557 1210 PRINTS P-type cation-transporting ATPase superfamily signature 408 422 - -
Cec06g1557 1210 PRINTS P-type cation-transporting ATPase superfamily signature 609 628 - -
Cec06g1557 1210 PRINTS P-type cation-transporting ATPase superfamily signature 555 565 - -
Cec06g1557 1210 FunFam Copper-transporting ATPase 1, putative 197 311 - -
Cec06g1557 1210 SUPERFAMILY HMA, heavy metal-associated domain 22 96 IPR036163 GO:0046872(InterPro)
Cec06g1557 1210 NCBIfam HAD-IC family P-type ATPase 182 687 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec06g1557 1210 MobiDBLite consensus disorder prediction 998 1026 - -
Cec06g1557 1210 FunFam Putative cadmium/zinc-transporting ATPase 3 419 541 - -
Cec06g1557 1210 MobiDBLite consensus disorder prediction 840 859 - -
Cec06g1557 1210 SFLD p-type atpase 391 661 IPR044492 -
Cec06g1557 1210 FunFam Putative cadmium/zinc-transporting ATPase 3 21 94 - -
Cec06g1557 1210 SUPERFAMILY Calcium ATPase, transduction domain A 222 307 IPR008250 -
Cec06g1557 1210 ProSitePatterns Hypothetical cof family signature 2. 609 631 - -
Cec06g1557 1210 ProSitePatterns E1-E2 ATPases phosphorylation site. 410 416 IPR018303 -
Cec06g1557 1210 SFLD Haloacid Dehalogenase 391 661 - -
Cec06g1557 1210 MobiDBLite consensus disorder prediction 998 1015 - -
Cec06g1557 1210 SUPERFAMILY Calcium ATPase, transmembrane domain M 159 402 IPR023298 -
Cec06g1557 1210 ProSitePatterns Anaphylatoxin domain signature. 1156 1190 IPR000020 GO:0005576(InterPro)
Cec06g1557 1210 Gene3D - 23 94 - -
Cec06g1557 1210 Pfam E1-E2 ATPase 218 387 - -
Cec06g1557 1210 SUPERFAMILY HAD-like 408 710 IPR036412 -
Cec06g1557 1210 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 24 909 IPR051014 GO:0016020(PANTHER)|GO:0022857(PANTHER)|GO:0055085(PANTHER)
Cec06g1557 1210 Gene3D - 399 660 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1557 Cec-Chr6:29140392 Cec10g0935 Cec-Chr10:20610313 2.90E-58 dispersed
Cec06g1549 Cec-Chr6:29026071 Cec06g1557 Cec-Chr6:29140392 1.30E-18 proximal
Cec02g0780 Cec-Chr2:8893104 Cec06g1557 Cec-Chr6:29140392 8.50E-54 transposed
Cec02g0847 Cec-Chr2:10335609 Cec06g1557 Cec-Chr6:29140392 1.20E-41 transposed
Cec11g1232 Cec-Chr11:25798282 Cec06g1557 Cec-Chr6:29140392 1.10E-282 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1557 K01534 - csv:101211188 1732.23