Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1595 ATGATTGCAGATGCTATTACTCCGCCCGATAACTCCGACGGTATCCGGCATCAGCTTCGAGAGCATCTACTGGTGGTGAACGACGAAATTGAAAACGGAGGAGTGGACAGTCATGTGAAGATTCGTATACGTAATTTGACGAAGCTTTCAAACGGAATGGAGGATCCGATTCTCAGAGGAATCAGTGTGGATATACCTAAGGGGAAGATCGTCGGAATTATAGGCCCGAGTGGCGGTGGCAAATCCACGACGCTTAGGGCTCTTAATCGGCTGTGGGAGCCTCCGGCGGGAACCGTGTTTTTAGACGGCCACGATATTGTCAATCTCGACGTTCTTGGCCTTCGCCGGAAAGTCGGGATGCTCTTCCAACTTCCTGTTCTCTTTGAAGGTACTGTTGCTGATAATATAAGATATGGACCACAGTTAAGGGGAGAGAAGCTGAGTGATGATGAAGTTCACAAGTTACTCAATCTAGCAGATCTCGACTCGTCGTTCTTTAGCAAGATTGGTTCTGAACTATCCGTGGGGCAAGCTCAACGAGTCGCACTTGCTCGAACCTTAGCAAATGCACCTGAGGTGTTGTTGCTAGATGAACCAACGAGCGCATTGGATCCTATCTCGACCGAGAACATTGAGGACGTGTTAGTGAAGCTGAAGAAGAAATGGGGATTAACAATCGTAATGGTTTCACATAGCATCAAACAAATCCAAAGAATTGCAGACATTGTCTGTCTGCTCGTAAAAGGCGAGATTGTCGAAATCCTACCACCGAACAAACTATGCGAAGCCAAGCACCCCATGGCCCTCAAATCCACGATATCGGTTGGCTCCGACCTGATCCGACCCTCGAAATTGAGCATCGGGATGAAGAAAAGCCCCCAACATCAGTCACGTGCTAGGTTACCTCCGGGGCCCACATTCACTTCTGCCACGTCACCATCCTCCCTTCTACAGTACATGGGCGCCCTTCCCAATCCCTTCCCCTTCTCCTTCTCTCTCTTCTCTCTAGTTTTCCTCTTCACCGCCGTCTCACCCGCAACTTCTACCACCAGCCACCGACTTCTTAAGCTTATCCTGCCCCACCCTTTAAAGGAAACTGTTTTTGTTGCTTCTCCTTCTCCGCCGCCACCGCCGTCGTTTCCTTCTGCTCCTCCTCCCGAGGAGAAGCCGGTGTACTCTCCATTCCGGCCAAGCATGGCGGTGGTGGTGGGTGTTCTGACCACCACTTTCTCCATCACGTTTCTTCTCCTTTTATACGCCAAGCATTGCAAGCGTGGGAATGCGGTGGTGGTTGGTTACTCGATGCGTCCCAATACGATGATGGGTGTTACGAGCTTCTCGACGAGGAAGAACTCCGGCATCGACCAGGCCGTGATCGAATCGTTGCCGATTTTCCGATTTGGGTCGTTGAGTGGGCAAAAGGAAGGTCTGGAATGCGCCGTTTGTCTCAACAGATTCGAGCCGACGGAAGTTCTGAGACTTCTCCCTAAATGCAAACACGCCTTCCATGTCGAATGCGTCGATACTTGGCTCGACGCTCACTCCACTTGCCCTCTATGTCGCTACAGAGTCGACCCAGAGGACGTCTTATTAGTCGAAGACGTCAATATATTTCTCCACAACCCACCACCTCCTCCGCCACGGGGATCGAATTCCAAGGATGTTGTGTTGAACTTAGAACAGGGAAGAAGAAGCGGAAAGGCTGGATCCGGGAGAGTCTCCGGCAGACACTCGTCTGTCGGCGAGAAGAGAACAGGGGAGTCCAGTTACCGTGATCCAGCATTGTTGAGACGGTCACTCGACAGCAAGAGAACCGAAACGGTAGCTGTCGGATGCTTCGATCGGCACCGGAAGGACGGGCTACTTTTGCCGGAGGAGAAAAGAAATCAGAATCAGAATCAGAATCAGAATCAGAATCAGAACAGATTGGAGCACAGGATCATAGTGTCGCCGAGGCCGCCGGTACTGGTACAAGGGCAACAGAGATGGAGCGATGTACAAGCTTCGGATCTGTTGTATCTACGGTCAGAAATGATAATATCTGACAGCCGCAGATTTTCGGTAGCTTCATTACCACCGGAATTAAAGAGACAGCGACGGATGGGGATGATGGGGAAGCATGCCGGAAAAGGGACCGGGATGATGATGATGGCAGATGTGTAA 2163 50.95 MIADAITPPDNSDGIRHQLREHLLVVNDEIENGGVDSHVKIRIRNLTKLSNGMEDPILRGISVDIPKGKIVGIIGPSGGGKSTTLRALNRLWEPPAGTVFLDGHDIVNLDVLGLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGEKLSDDEVHKLLNLADLDSSFFSKIGSELSVGQAQRVALARTLANAPEVLLLDEPTSALDPISTENIEDVLVKLKKKWGLTIVMVSHSIKQIQRIADIVCLLVKGEIVEILPPNKLCEAKHPMALKSTISVGSDLIRPSKLSIGMKKSPQHQSRARLPPGPTFTSATSPSSLLQYMGALPNPFPFSFSLFSLVFLFTAVSPATSTTSHRLLKLILPHPLKETVFVASPSPPPPPSFPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGNAVVVGYSMRPNTMMGVTSFSTRKNSGIDQAVIESLPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHNPPPPPPRGSNSKDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDSKRTETVAVGCFDRHRKDGLLLPEEKRNQNQNQNQNQNQNRLEHRIIVSPRPPVLVQGQQRWSDVQASDLLYLRSEMIISDSRRFSVASLPPELKRQRRMGMMGKHAGKGTGMMMMADV 720
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29517781 29521091 - CePI673135_06g015950.1 Cec06g1595 206332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1595 720 MobiDBLite consensus disorder prediction 626 642 - -
Cec06g1595 720 CDD ABC_PstB_phosphate_transporter 41 260 IPR005670 GO:0005315(InterPro)|GO:0016020(InterPro)|GO:0035435(InterPro)
Cec06g1595 720 MobiDBLite consensus disorder prediction 562 598 - -
Cec06g1595 720 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 453 528 IPR013083 -
Cec06g1595 720 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 273 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec06g1595 720 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec06g1595 720 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 18 270 IPR005670 GO:0005315(InterPro)|GO:0016020(InterPro)|GO:0035435(InterPro)
Cec06g1595 720 SMART AAA_5 67 250 IPR003593 GO:0016887(InterPro)
Cec06g1595 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 263 IPR027417 -
Cec06g1595 720 Pfam ABC transporter 58 201 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec06g1595 720 Gene3D - 36 284 IPR027417 -
Cec06g1595 720 SMART ring_2 479 520 IPR001841 -
Cec06g1595 720 MobiDBLite consensus disorder prediction 622 642 - -
Cec06g1595 720 FunFam RING-H2 finger protein ATL43 454 528 - -
Cec06g1595 720 FunFam ABC transporter, ATP-binding protein 38 271 - -
Cec06g1595 720 SUPERFAMILY RING/U-box 460 526 - -
Cec06g1595 720 CDD RING-H2_EL5-like 478 521 - -
Cec06g1595 720 ProSiteProfiles Zinc finger RING-type profile. 479 521 IPR001841 -
Cec06g1595 720 MobiDBLite consensus disorder prediction 577 598 - -
Cec06g1595 720 Pfam Ring finger domain 478 521 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1096 Cec-Chr3:22962810 Cec06g1595 Cec-Chr6:29517781 1.70E-24 dispersed
Cec06g0973 Cec-Chr6:13719573 Cec06g1595 Cec-Chr6:29517781 1.50E-41 dispersed
Cec06g0974 Cec-Chr6:13722114 Cec06g1595 Cec-Chr6:29517781 2.40E-36 dispersed
Cec06g1595 Cec-Chr6:29517781 Cec09g1166 Cec-Chr9:11706055 3.60E-32 dispersed
Cec06g1595 Cec-Chr6:29517781 Cec09g0117 Cec-Chr9:1022878 4.60E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1595 K02068 - csv:101203916 630.943