Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1632 ATGCCGGATACACCAACATCGCCGAAGAGCGGTGGCCGTCTGGTGCTAATGGAGAATCTGCTCGGACTTCTCCGTATTCGCATCATTCGTGGTGTCAATCTTGCTGTTCGTGATGTTCGCAGTAGTGATCCTTATGTTGTCGTCAAGATGGGAAAGCAAAAACTGAAGACAAGGGTGATAAAGAAGGATGTTAATCCTGTATGGAATGAAGATCTAACTCTTTCTGTCAGTGATCCGAATCTTCCAATTAAGCTGACCGTTTACGATCACGACACATTTAGCAAGGATGATAAAATGGGATATGCTGAGTTCGATATCAAAGCATTTATGGAAGCTCTGAAGATGAACTTGAAAAATCTTCCCAGTGGAACTACAATCTCACGAATGCTACCGGCCAGGCAAAACTGTCTCGCTGAAGAGAGCTGTGTCGTCTGGAAAGATGGTAAAGTAGTCCAAGATATCTACCTTAGATTGAAAAATGTCGAATGCGGAGAAGTCGAAATTCAGTTGCAGTGGATTGATCTTCCGAACCCCAAAGGCTGA 543 44.01 MPDTPTSPKSGGRLVLMENLLGLLRIRIIRGVNLAVRDVRSSDPYVVVKMGKQKLKTRVIKKDVNPVWNEDLTLSVSDPNLPIKLTVYDHDTFSKDDKMGYAEFDIKAFMEALKMNLKNLPSGTTISRMLPARQNCLAEESCVVWKDGKVVQDIYLRLKNVECGEVEIQLQWIDLPNPKG 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29916336 29918621 + CePI673135_06g016320.1 Cec06g1632 206369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1632 180 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 17 178 IPR044562 -
Cec06g1632 180 CDD C2_ArfGAP 21 164 - -
Cec06g1632 180 SMART C2_3c 23 118 IPR000008 -
Cec06g1632 180 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 22 166 IPR035892 -
Cec06g1632 180 Gene3D C2 domain 18 179 IPR035892 -
Cec06g1632 180 ProSiteProfiles C2 domain profile. 8 119 IPR000008 -
Cec06g1632 180 Pfam C2 domain 22 109 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0789 Cec-Chr3:8998241 Cec06g1632 Cec-Chr6:29916336 1.60E-35 dispersed
Cec06g1632 Cec-Chr6:29916336 Cec08g1469 Cec-Chr8:26424761 1.70E-10 dispersed
Cec01g1159 Cec-Chr1:18222986 Cec06g1632 Cec-Chr6:29916336 4.20E-34 transposed
Cec05g1290 Cec-Chr5:12775535 Cec06g1632 Cec-Chr6:29916336 2.30E-67 transposed
Cec07g0675 Cec-Chr7:11152760 Cec06g1632 Cec-Chr6:29916336 3.00E-49 transposed
Cec01g1602 Cec-Chr1:30671446 Cec06g1632 Cec-Chr6:29916336 1.10E-73 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1632 - - - 0.0