Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g1636 | ATGTGGACGTTGGGTTACGATGACAATGGCGGAGAATTTTGCTTCTCTGAGGCCTTTAATGGCGGTCGCAAGCTTCGACCTCTTGTCCCTCGCCCTTTGCCTTCCCTTCATGCCAATGGCGCTAACTTCTCTTCTCAATATTACCATCTTGGTAATCATTTGAATGAGGATAACAAGAGAGGGTTGTTGAATAATGGAAAGAGTTGGTCGGGTCCAACACCAGTAGTAGTTAGCTCATCAAGATGGAATCCAACGGCGGAGCAGTTGAGAATTCTGGAGGAGCTTTACCGGCGAGGGACACGAACGCCGTCCGCCGACCAAATCCAACACATCACCACCCAGCTCCGCCGCTACGGCAAAATAGAAGGCAAAAACGTTTTCTATTGGTTTCAAAATCACAAGGCTAGAGAGCGCCAAAAACGACGCCGTCAAACTGCCGCTGAACAAACCAAATATTCTGAGGCAGAAAAAGGGTACGAAACTGAAGAGACAAAGACGAAGTGTAGGTGGGGAAGGGCAACACCTCCACCCTCTATAATCTCCTCTACTCTACTTTCAAAGGAATGGGCAGAAACACAGAGAAAAACAAAAGTAGTTGAATTGGAAGAAGAAGAAGAAGAAACAAGAAGAGAGTCAGTGGAAAGAGAAGAGACATGGAATTACAATAATATATTGAATTGTCAACTCATAAACCCTACAAGGAAGACCCAACATCTAGACAGTGTCATCGAATCCCGCAACGGAGACCGACGACACAATGTCGTTGACAACAACAATGACGACGAGGAATCTAAAACGATGACACTTCAGTTGTTTCCACTCCATAGCACAAAGTTTTACAAATACGACAGCGAGAGAGAGGGACGACGTGATGACCAACTGGAGATCACGTCGGATTCAGACATGATCAAAAGCTCCTCCTTGTCTCCAAATTGTAGTTTCCAGTTCTTTGAGTTTCTTCCACTCAAAAACTAA | 975 | 45.23 | MWTLGYDDNGGEFCFSEAFNGGRKLRPLVPRPLPSLHANGANFSSQYYHLGNHLNEDNKRGLLNNGKSWSGPTPVVVSSSRWNPTAEQLRILEELYRRGTRTPSADQIQHITTQLRRYGKIEGKNVFYWFQNHKARERQKRRRQTAAEQTKYSEAEKGYETEETKTKCRWGRATPPPSIISSTLLSKEWAETQRKTKVVELEEEEEETRRESVEREETWNYNNILNCQLINPTRKTQHLDSVIESRNGDRRHNVVDNNNDDEESKTMTLQLFPLHSTKFYKYDSEREGRRDDQLEITSDSDMIKSSSLSPNCSFQFFEFLPLKN | 324 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 29965907 | 29969866 | - | CePI673135_06g016360.1 | Cec06g1636 | 206373 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g1636 | 324 | FunFam | WUSCHEL-related homeobox 4 | 79 | 146 | - | - | |
Cec06g1636 | 324 | MobiDBLite | consensus disorder prediction | 138 | 158 | - | - | |
Cec06g1636 | 324 | ProSiteProfiles | 'Homeobox' domain profile. | 85 | 140 | IPR001356 | GO:0003677(InterPro) | |
Cec06g1636 | 324 | MobiDBLite | consensus disorder prediction | 141 | 158 | - | - | |
Cec06g1636 | 324 | SMART | HOX_1 | 77 | 144 | IPR001356 | GO:0003677(InterPro) | |
Cec06g1636 | 324 | Pfam | Homeodomain | 80 | 139 | IPR001356 | GO:0003677(InterPro) | |
Cec06g1636 | 324 | SUPERFAMILY | Homeodomain-like | 79 | 144 | IPR009057 | - | |
Cec06g1636 | 324 | PANTHER | WUSCHEL-RELATED HOMEOBOX 1-RELATED | 74 | 319 | IPR044555 | GO:0003700(InterPro)|GO:0099402(InterPro) | |
Cec06g1636 | 324 | CDD | homeodomain | 81 | 141 | IPR001356 | GO:0003677(InterPro) | |
Cec06g1636 | 324 | Gene3D | - | 79 | 148 | - | - | |
Cec06g1636 | 324 | Coils | Coil | 198 | 218 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g2178 | Cec-Chr2:39193871 | Cec06g1636 | Cec-Chr6:29965907 | 9.00E-23 | dispersed | |
Cec03g0160 | Cec-Chr3:1585439 | Cec06g1636 | Cec-Chr6:29965907 | 4.90E-25 | dispersed | |
Cec06g1636 | Cec-Chr6:29965907 | Cec08g1665 | Cec-Chr8:27970519 | 2.60E-22 | dispersed | |
Cec04g1726 | Cec-Chr4:36280308 | Cec06g1636 | Cec-Chr6:29965907 | 8.60E-23 | transposed | |
Cec11g0658 | Cec-Chr11:7227661 | Cec06g1636 | Cec-Chr6:29965907 | 3.60E-22 | transposed | |
Cec01g1608 | Cec-Chr1:30740878 | Cec06g1636 | Cec-Chr6:29965907 | 1.00E-41 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29807 | PF00046 | Homeodomain | 3.40E-19 | CL0123 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g1636 | - | - | - | 0.0 |