Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1641 ATGGGGAGTGGAACTCTCGTGGACGGTGTTCGTCGCTGGTTTCAACGTCGCACTTCTTCTTCTTCTTCCACTTCTACTTCTAATTTTGGTTCTAGTTCTGATTCTTCTGATCCTAATCTCAATTACCCTAATCACCATAAGTTTGACTATGTTGATAATGGTGGTGTTAATGGTGACCAACTGTTGAGTAGCGATTTACGCGCCCAATCAACCATTACCCACAAACGCAAACCTCTAAGGAAACAACCCCAACTTGGAGGAGAAGGGATTCTTGAGCAATTACCTGAGGAGGAGGACGACGATCTTGATTACTCTGCCTTGAAGCTCATCAAAGTTCCTAAACGGACAAATCACTTCAGACATCCTCCTCCTCCTGCTTTAATGGACTCCCACAAGAAGGGTGGGTTGGAAACAGAATTTTTCACAGAGTATGGAGAGGCCAGCAGATATCAGGTTCAAGAAATAATCGGTAAAGGCAGCTATGGGGTTGTCGGTTCCGCCGTTGATACTCATACTGATGAGAAGGTCGCAATTAAGAAAATTAATGATGTTTTTGAGCATGTTTCTGATGCCACAAGGATTTTAAGAGAAATTAAACTCCTACGGCTGCTCCGTCATCCAGATATAGTAGAAATAAAGCACATTATGCTTCCTCCTTCACGGAGAGAATTCAGAGATATTTATGTTGTTTTTGAATTGATGGAATCTGACCTTCACCAAGTAATTAAGGCCAATGATGATCTCACTCCTGAGCATCATCAGTTTTTCTTGTACCAGCTTCTTCGTGGTCTGAAATATATTCATACAGCAAATGTATTTCATCGTGATTTAAAGCCCAAAAACATTTTAGCTAATGCCGACTGCAAACTGAAAATTTGTGATTTTGGACTTGCTCGTGTATCATTTAATGATGCACCATCTGCTATTTTCTGGACTGACTATGTTGCGACTCGGTGGTATCGTGCTCCTGAACTTTGTGGCTCTTTTTTCTCAAAATACACTCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCGGAAATGCTCACTGGAAAACCGCTGTTTCCTGGGAAAAATGTGGTGCACCAACTGGATCTGATGACTGATGTGCTTGGCACACCTTCCGCTGAGTCCATTGCTAGGATTCGGAATGAAAAGGCAAGAAGATACCTTAGTAACATGAGGAGAAAGCAGCCTGTTCCTCTCACACAAAAGTTCCCCAATGCCGATCCCTTGGCTCTCCGCTTGCTTCAACGCCTGCTTGCATTTGATCCCAAAGATCGTCCCACTGCTGAAGAGGCATTAGCTGATCCGTATTTTCATCGTTTGGCTAACGTGGATCGGGAACCATCAACACAACCAATTTCAAAACTTGAGTTTGAATTTGAGAGAAGAAAGTTAACAAAAGATGATGTTAGAGAATTAATTTATCGAGAGATCTTGGAGTATCATCCTCAGATGCTACAGGAATATCTCCGCAGTGGAGAACAAACAAGCTTCATGTACCCAAGTGGGGTTGATCGCTTCAAACGCCAGTTTGCACATCTAGAGGAACATTATGGCAAGGGTGAAAGAAGTACTCCACTTCAAAGACAGCATGCTTCATTGCCCAGGGAAAGGGTTTGTGCACCAAAAGATGAATCCGAACAACACAATGATTTAGAAGGAAGAAATGTTGCTACATCTCTTCAAAGTCCCCCAAAGTCGCAAGGAGATGGTTCCGAAAATGCAAACGGTAATGAACATAATGGACCAAACAAGCCAAATTACAGTGCTCGTAGCTTGTTGAAGAGTGCCAGCATTAGTGCCTCTAAATGTATAGATGTTAAACCAAGAAAAGACCTAGAGGAGGAACCGATTACCGAGATGAATGACGAGGCAATTGACGGATTGTCTCATAAGGACATTTTGGCTACAAGGCAAAGTGTAGCGAAGTTTCTGAAGTCAGGGCCCTTTCAGGTTGTTACCCTCGTGTAG 1980 42.73 MGSGTLVDGVRRWFQRRTSSSSSTSTSNFGSSSDSSDPNLNYPNHHKFDYVDNGGVNGDQLLSSDLRAQSTITHKRKPLRKQPQLGGEGILEQLPEEEDDDLDYSALKLIKVPKRTNHFRHPPPPALMDSHKKGGLETEFFTEYGEASRYQVQEIIGKGSYGVVGSAVDTHTDEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDVLGTPSAESIARIRNEKARRYLSNMRRKQPVPLTQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFHRLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRSGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVCAPKDESEQHNDLEGRNVATSLQSPPKSQGDGSENANGNEHNGPNKPNYSARSLLKSASISASKCIDVKPRKDLEEEPITEMNDEAIDGLSHKDILATRQSVAKFLKSGPFQVVTLV 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30022023 30027659 + CePI673135_06g016410.1 Cec06g1641 206378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1641 659 FunFam Mitogen-activated protein kinase 236 464 - -
Cec06g1641 659 ProSitePatterns Protein kinases ATP-binding region signature. 156 180 IPR017441 GO:0005524(InterPro)
Cec06g1641 659 MobiDBLite consensus disorder prediction 539 555 - -
Cec06g1641 659 MobiDBLite consensus disorder prediction 520 593 - -
Cec06g1641 659 Gene3D Transferase(Phosphotransferase) domain 1 236 464 - -
Cec06g1641 659 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 147 482 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cec06g1641 659 SMART serkin_6 150 441 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1641 659 MobiDBLite consensus disorder prediction 16 42 - -
Cec06g1641 659 FunFam Mitogen-activated protein kinase 465 487 - -
Cec06g1641 659 ProSiteProfiles Protein kinase domain profile. 150 441 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1641 659 Pfam Protein kinase domain 150 441 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1641 659 ProSitePatterns MAP kinase signature. 185 288 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1641 659 SUPERFAMILY Protein kinase-like (PK-like) 146 446 IPR011009 -
Cec06g1641 659 CDD STKc_TDY_MAPK 149 486 - -
Cec06g1641 659 MobiDBLite consensus disorder prediction 556 593 - -
Cec06g1641 659 MobiDBLite consensus disorder prediction 16 48 - -
Cec06g1641 659 Gene3D Phosphorylase Kinase; domain 1 166 487 - -
Cec06g1641 659 FunFam Mitogen-activated protein kinase 139 244 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0576 Cec-Chr6:6367183 Cec06g1641 Cec-Chr6:30022023 1.50E-206 dispersed
Cec06g1641 Cec-Chr6:30022023 Cec09g2339 Cec-Chr9:40244236 8.60E-198 dispersed
Cec03g0980 Cec-Chr3:17152601 Cec06g1641 Cec-Chr6:30022023 7.90E-208 transposed
Cec07g0713 Cec-Chr7:13395452 Cec06g1641 Cec-Chr6:30022023 1.00E-205 transposed
Cec01g1613 Cec-Chr1:30787732 Cec06g1641 Cec-Chr6:30022023 1.30E-207 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72100 PF00069 Pkinase 1.90E-68 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1641 - - - 0.0