Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1650 ATGCAAAGATCACCAACAATGGCAGAGGCAAAGATAATTGGGTCAGCTTCAAGCCTATTCTGCATAAGGGTTGAATGGGCCTTGAAGCTCAAAGGAATTGAGTACGAGTACATACCTGAAGACTTGAGAAACAAAAGTGAGTTGCTTCTCAAGTCCAACCCCGTGCTCAAGAAAATACCTGTGCTTTTGCACAATGACAAAGCCATCTCCGAGTCGCTTCTCATTATCGAATACATCGACGAGACATGGAAGGAGAACCCAATATTGCCTGAAGATCCATATGACAGAGCCAATGCTCGCTCCTGGGCTAGGTTTTTAGATGAGAAGGGCGTGTTCGGTGCGTGGGAAGCTTGCCAGGCTGAAGGAGAAGAGAAGGAGAAGGCTGTGGAGGCTGCAGTACAAAATTTGGGACTGCTTGACAAAGAAATCCAAGGAAAGAAATTCTTTGGAGGAGAGAAAATTGGTTATCTAGATTTAGCTGCAGGTTGGATCTGCCACTGGCTCAATGTTCTGGATGAAGTGGGAGAGAGGGTCCCATCCCTTCATGAATGGGCTCAAAACTTCATCCAGATTCCAGTTATCAAAGAATCCCTTCCACCCAGAGAAAATCTTGTCAACTACTTCAAGGGGAGTCTGAGCTACGTCCGGTCCTTAGCTGCAAAAAAGTAA 669 45.89 MQRSPTMAEAKIIGSASSLFCIRVEWALKLKGIEYEYIPEDLRNKSELLLKSNPVLKKIPVLLHNDKAISESLLIIEYIDETWKENPILPEDPYDRANARSWARFLDEKGVFGAWEACQAEGEEKEKAVEAAVQNLGLLDKEIQGKKFFGGEKIGYLDLAAGWICHWLNVLDEVGERVPSLHEWAQNFIQIPVIKESLPPRENLVNYFKGSLSYVRSLAAKK 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30101832 30103167 - CePI673135_06g016500.1 Cec06g1650 206387

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1650 222 SFLD Main (cytGST) 7 214 - -
Cec06g1650 222 Pfam Glutathione S-transferase, C-terminal domain 123 192 IPR004046 -
Cec06g1650 222 FunFam Tau class glutathione S-transferase 5 91 - -
Cec06g1650 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 87 IPR004045 -
Cec06g1650 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 209 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cec06g1650 222 SUPERFAMILY Thioredoxin-like 12 108 IPR036249 -
Cec06g1650 222 FunFam Tau class glutathione S-transferase 89 218 - -
Cec06g1650 222 Pfam Glutathione S-transferase, N-terminal domain 19 81 IPR004045 -
Cec06g1650 222 SUPERFAMILY GST C-terminal domain-like 81 210 IPR036282 -
Cec06g1650 222 Gene3D Glutaredoxin 5 88 - -
Cec06g1650 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 208 IPR010987 -
Cec06g1650 222 CDD GST_C_Tau 93 210 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cec06g1650 222 Gene3D - 89 217 - -
Cec06g1650 222 SFLD Main.3: Omega- and Tau-like 7 214 IPR045073 -
Cec06g1650 222 CDD GST_N_Tau 11 83 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1650 K00799 - - csv:101217418 392.889
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0427 Cec-Chr5:3498118 Cec06g1650 Cec-Chr6:30101832 2.90E-49 dispersed
Cec05g0429 Cec-Chr5:3501130 Cec06g1650 Cec-Chr6:30101832 4.50E-42 dispersed
Cec06g1650 Cec-Chr6:30101832 Cec07g1156 Cec-Chr7:26931157 1.80E-38 dispersed
Cec06g1650 Cec-Chr6:30101832 Cec05g2664 Cec-Chr5:37244045 1.10E-29 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g252 . . . . . . . . . . . Cma11g00299 . . Sed08g0385 . . Bhi02g00117 Tan09g1846 Cmetu02g0734 . Hepe09g0371 . . Cla06g01435 Cam06g1590 Cec06g1650 Cco06g1642 Clacu06g1551 Cmu06g1506 Cre06g2315 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi06g01302 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013759 0 1 0 0 0 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 0 1 1 1 1 1 1 1 3 25