Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1651 ATGGCTGAGCTCGATCCATCAAAGAAAGTGGCCGATAGATATTTAAAGCGTGAGGTTCTCGGAGAGGGTACCTATGGTGTTGTATATAAAGCCATTGATACTCAGACAGGCCAGACGGTTGCAATTAAGAAAATTCGGCTTGGGAAACAAAAAGAGGGAGTAAATTTTACGGCTCTTCGAGAAATCAAGCTGCTTAAAGAGCTCAAAGATTCAAATATAATTGAGTTAATTGATGCATTCCCTCACAAAGGAAATTTGCATCTTGTATTTGAATTTATGGAGACAGACCTTGAAGCTGTTATACGCGATCGAAACATATTTCTTTCCCCAGCTGACATAAAATCATACCTTCAGATGACTTTGAAAGGCCTTGCTTATTGCCACAAGAAATGGGTTTTACATAGGGATATGAAGCCAAATAATTTGTTGATAGGATCAAATGGTCAACTGAAACTTGCAGATTTTGGTTTAGCTCGGATATTTGGGAGTCCGGATCGTAGATTTACTCACCAGGTGTTTGCCCGATGGTACAGAGCACCTGAGTTATTGTTTGGCACTAAGCAATATGGTTCTGCAGTGGATGTTTGGGCAGCAGCTTGTATTTTTGCGGAACTACTACTTCGTCGTCCTTTTCTTCAGGGTTCAAGTGACATTGATCAATTAGGGAAGATTTTTGCAGCATTTGGAACTCCTACGCCTTCACAATGGCCTGATATGTTATACCTACCTGATTACGTTGAGTTCCAATATGTTCCTGCACCTCCTCTACGATCATTGTTTCCTATGGCTAGTGATGACACGCTGGATCTCCTATCAAAGATGTTTGCATATGATCCAAAATCTAGAATTACCATTCAACAAGCATTGGAGCATAGGTACTTCTCATCTGCACCACTTCCCACAGATCCTAGTAAGCTTCCAAGGCCTACTTCAAAGCGTGAACCTACGAACTCTCGAGTTTTGGACTTAAATTCAAATGAGGGTCCTACTGTCCTCTCACCTCCCAGAAAGTCAAGAAGAGTAATGCCAGAGCCTGAGGCTTTTGAAGGAAATGCACATCGAGCTGATAGGCTTGATGACCATGTTAATGAGGTGCGAGAGGTAGCTGCTGGAAATTCAAGCAAGAATGAAGCAGTGCCTATGTCGTTGGATTTTTCTATTTTTGGTGGAAAACCTCCAAATAGACCTACAATTAACAGTGCTGACAGATCACATCTTAAAAGGAAATTAGATCTTGAATTCCAGCAGGCAAATTGTGGAATTACTTCCCAAGGTAAAGACTGCCGGATCGTTTATCTTTTACCCTCTTATCCCCTTGAGCGACTGCTAAATTATACCGGTGTTTCATCATGTAATTTTTACATATAG 1368 41.15 MAELDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDSNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDMLYLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRITIQQALEHRYFSSAPLPTDPSKLPRPTSKREPTNSRVLDLNSNEGPTVLSPPRKSRRVMPEPEAFEGNAHRADRLDDHVNEVREVAAGNSSKNEAVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQANCGITSQGKDCRIVYLLPSYPLERLLNYTGVSSCNFYI 455
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 30105212 30110423 + CePI673135_06g016510.1 Cec06g1651 206388
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1651 455 MobiDBLite consensus disorder prediction 310 332 - -
Cec06g1651 455 ProSitePatterns Protein kinases ATP-binding region signature. 20 44 IPR017441 GO:0005524(InterPro)
Cec06g1651 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1651 455 MobiDBLite consensus disorder prediction 294 341 - -
Cec06g1651 455 FunFam Putative cyclin-dependent kinase 7 95 310 - -
Cec06g1651 455 FunFam Cyclin-dependent kinase D-1 5 94 - -
Cec06g1651 455 Gene3D Phosphorylase Kinase; domain 1 10 94 - -
Cec06g1651 455 PANTHER CELL DIVISION PROTEIN KINASE 14 294 IPR050108 GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0045944(PANTHER)|GO:0070985(PANTHER)
Cec06g1651 455 Pfam Protein kinase domain 16 294 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1651 455 Gene3D Transferase(Phosphotransferase) domain 1 95 310 - -
Cec06g1651 455 ProSiteProfiles Protein kinase domain profile. 14 294 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1651 455 CDD STKc_CDK7 13 307 IPR037770 GO:0005675(InterPro)|GO:0008353(InterPro)|GO:0070985(InterPro)
Cec06g1651 455 SMART serkin_6 14 294 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1651 455 SUPERFAMILY Protein kinase-like (PK-like) 10 301 IPR011009 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1651 Cec-Chr6:30105212 Cec11g1444 Cec-Chr11:28606514 3.00E-69 dispersed
Cec10g1271 Cec-Chr10:26864005 Cec06g1651 Cec-Chr6:30105212 1.00E-12 dispersed
Cec06g1651 Cec-Chr6:30105212 Cec08g1784 Cec-Chr8:28927488 4.90E-67 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72101 PF00069 Pkinase 2.30E-72 CL0016 Cec PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1651 K02202 - csv:101217645 819.305