Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1686 ATGCGTATGAGCTGTAACGGATGCAGAGTTCTTCGCAAAGGCTGCAGTGAGAGCTGCTCCATCAGACCCTGTCTTCAATGGATCAAATCCCCCCAATCCCAAGCCAACGCCACTTTCTTCCTCGCCAAATTCTACGGCCGAGCTGGCCTTGTTAACCTCATCAATGCCGGCCCTGACCATCTCCGCCCAGCTATTTTTAAATCATTGCTTTTCGAGGCGTGTGGCCGGATTGTGAATCCCATTTTTGGGTCCGCTGGATTGTTGTGGTCCGGGAGCTGGCAGCTCTGTCAGGACGCCGTCGAAGCTGTTCTGAAAGGCGCGCCGATTCTGCCGGTTTCTTCCGAGACGGCGGCGTCGCACATGGGTCCACCCTTGAAAGGCTGCGATATCCGCCATGTCTCCAAACAGCAAAGCTCCGCCTCTGGTTCCGCACTTAAAAAGATCAAGACGCGGCGGCGGTTCAAACGCTCTGCGGTGGCGGTCAAGTCGAAGCCGAAGGAGGAGCCGGTGGTGGTGGTGTCGGAGTTCAAATTCGGAGACCCGACCCGGATTGTATCGGAGCCCCGGTGTTTGAAGTTTGAGTTGGATAATTGGGGGGGTCGTGAGTCGCCGGAGAAGGAGTGCGGCAGCGACCACACCGAGTGCTTGTCGGTGGAGACTGTGGAGGCTTCTTCGGTGGGCCAGGGTGGTGACGTGGAGTTGGAACTTACCTTGGGGTTTGGGCACAGTCGGATGCTGACGTGA 744 57.26 MRMSCNGCRVLRKGCSESCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDHLRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASHMGPPLKGCDIRHVSKQQSSASGSALKKIKTRRRFKRSAVAVKSKPKEEPVVVVSEFKFGDPTRIVSEPRCLKFELDNWGGRESPEKECGSDHTECLSVETVEASSVGQGGDVELELTLGFGHSRMLT 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30440467 30441310 + CePI673135_06g016860.1 Cec06g1686 206423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1686 247 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Cec06g1686 247 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 240 - GO:0010468(PANTHER)
Cec06g1686 247 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1437 Cec-Chr4:33980341 Cec06g1686 Cec-Chr6:30440467 3.10E-41 transposed
Cec05g1339 Cec-Chr5:14256246 Cec06g1686 Cec-Chr6:30440467 2.30E-73 transposed
Cec05g2272 Cec-Chr5:34078014 Cec06g1686 Cec-Chr6:30440467 3.10E-37 transposed
Cec05g2493 Cec-Chr5:35976194 Cec06g1686 Cec-Chr6:30440467 5.20E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29811 PF03195 LOB 6.30E-22 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1686 - - - 0.0