Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1709 ATGCACCTTAGCTTCACATTGGAACTCCACTTTTCTTTCGGAAAGGATTTTGCCTTTAGTTATTTCGAATTTCATATAATTAAAGCGCGGAGGAGTAATCCCATACGGTCAGAAGCATTCGAAGCCGAAGCCGACCCCACAGCTTTCCAAATATCAACGGCTCAGATTCTCTACATTAAACATTACTTGATCTTCATTTTTCCCCCTTCTTCCCTAGTTTCAACTTCCGTGAGCTCTGTTCCAGTCTACTCTGTTTCTGGGGACTACCATCATTTTCCCGCAGAATTCTTTCCACTTTCCTGGAAAAATTTTCAAACCCATTTGGATTTACTGCAGTTTTTCGAAGTGGGTCAGTGTGACTTTTCTGGGTATGTTAAGGCAGTGAGAAAATCTAAGAGAAGAATGCCTGTTTCGACTCGGTCTCAGATCATGAACGACGGACAGATGGATCAAATTCCAGGTCAAGAAGACAAACAGCAACTGAATCTTCCACCTAGAAATCTTCACCATGGATTGAAAGAGAAGATGAAGGCATTAACCCTTTTGTACGAGCAACAGAAGCTTGCTTCAGCAGCTCTTAAGAGGCCGTCACCAAAAGGGGAAGATCTAAGATCCCCAACACATCCGAGCGTTGAGCTTAATGGTTCTTGTAAGAAAGAGGAGAAAGAGCCGAAGCTTGAGAATGTAATGAGAGAAAATGCAATGCCTAATTCAACTGTTACGAGAACTTATGTTCTTCCCCAACCACCGATGGCTGATGCAAAGGAGAATGTAGTGGTTGGAACTGATCGGATTGTCGGGTTTTCATGCTCAAAAAAGGCGAGTTTGTCAACGAATGTGGCGAGGAAATTGTCATTAGGGAACCCAATGCCTGTGGTGGAAATGAAGGAGAATGTGGGGTGTAAGAAATTGCAAGAAATGGAGGAATTGGGGAGTTTTTCAGAGAAGGAGAGTTTGGGGGAGAGTCGGATTTTGGTGTTTGTGAGGCTGAGACCAATGGCTAAGAAGGAAAAGGAAGCGGGAGCGAGGAGTTGTGTTAAAATAGTGAACAGAAGAGATCTTTATTTGACAGAGTTTGCTAATGAGAATGATTATTTGAGACTGAAGAGGCTTCGTGGACGCCATTTTACCTTCGACGCTTCATTTCCTGACACCACTAATCAGCAAGAAGTCTATTCCACCACGACAGCAGAGCTTGTAGAAGCAGTTCTGCAGGGAAGGAATGGTTCTGTGTTCTGCTATGGTGCCACTGGGGCTGGGAAAACCTACACAATGCTAGGAACGGTTCAGAACCCTGGAGTTATGGTTTTGGCTATCAAAGATCTCTTCACCAAGATTAGGCAGAGGAGCTGTGATGGGAACCATACAGTCCACCTCTCTTACATTGAGGTCTACAATGAAACAGTCAGAGATTTGTTGTCCCCAGGAAGGCCATTAGTCCTAAGAGAAGACAAGCAGGGAATTGTTGCTGCTGGTCTTACACAATACAGAGCTTACTCCACAGATGAAGTGATGGCCTTGCTTCAGCGAGGAAACCAAAACCGAACAACTGAACCGACCCGTGTTAACGAAACTTCTTCGCGTTCCCATGCTATACTGCAGGTTACAGTTGAATATCAAGCCAGAGATGGAGGAATGAATGTCGTAAACCAAGTGGGGAAGCTCTCATTGATTGATCTTGCTGGGTCAGAGAGGGCACTTGCCACAGATCAGAGGACATTAAGATCTCTTGAGGGAGCAAACATAAACAGATCACTACTTGCTCTAAGTAGTTGCATCAATGCCCTTGTGGAAGGAAAGAAACACATACCTTATAGGAATTCAAAACTCACACAACTTCTGAAGGACTCATTAGGAGGAGCTTGTAATACTGTGATGATTGCAAATATTAGCCCAAGCAACCTATCATTTGGTGAAACCCAAAATACACTTCATTGGGCTGATCGTGCTAAAGAGATCAGAACTAAGGTTGCAGAAGCAAATGAGGAGATAATGAAGGTACCGGAATCTGATTCAGACCAGGCGAAACTACTGCTTGAATTGCAGAAAGAAAATCGTGAATTGCGTGTGCAGTTGGCTCGCCAGCAACAGAAGTTACTTACATTACAGGCACAATCTCTAGCTGCAGTTGCTTCTCCAACCCCATCTTCGGCCACATCTCTTCTAACCCCTCCAACATCTGTTCACCAAAATGAAAAACGAAAACCAAGATCATCCTTCTTGAATGGGAACTGTTTCACACCAGAATCTAGAAAGAAGGGAGCAGAGGAAGGAGTTAGAGAGCTTCGCCGCACGGTGAAACAATTAGAAGCAGAACTTGAGAAGACAAAGAAAGAGCACGTTGTGCAGTTGAAGCACAAAGATGATCTTATCAGTGAGCTCTTGAAGAAAAGTGAAAAAACGGCAGCACTGGTGAGAGGAGAAAGGGTAAAGAGGGTAGAGACAAAAACCAGCTTAAGACCAAAGGAGCCAAGCATAGGTGAACTGAAGAGCCCAAGCCACCGTTTCAAATCACCAGCTCCAACAGCTAAGAAACGAAGCTTTTGGGACATAACAACAACTAATAGCCCATCTGTTGCCACAATAAATGGAAGGAAGACAAGAAGTCATGTACTTGCAGAGCCTCCTCCTACTGCTGCTCCCTCTATGCTTCGGCAGCCGGGTTTTGCTCGACAGAAACCATAG 2685 44.36 MHLSFTLELHFSFGKDFAFSYFEFHIIKARRSNPIRSEAFEAEADPTAFQISTAQILYIKHYLIFIFPPSSLVSTSVSSVPVYSVSGDYHHFPAEFFPLSWKNFQTHLDLLQFFEVGQCDFSGYVKAVRKSKRRMPVSTRSQIMNDGQMDQIPGQEDKQQLNLPPRNLHHGLKEKMKALTLLYEQQKLASAALKRPSPKGEDLRSPTHPSVELNGSCKKEEKEPKLENVMRENAMPNSTVTRTYVLPQPPMADAKENVVVGTDRIVGFSCSKKASLSTNVARKLSLGNPMPVVEMKENVGCKKLQEMEELGSFSEKESLGESRILVFVRLRPMAKKEKEAGARSCVKIVNRRDLYLTEFANENDYLRLKRLRGRHFTFDASFPDTTNQQEVYSTTTAELVEAVLQGRNGSVFCYGATGAGKTYTMLGTVQNPGVMVLAIKDLFTKIRQRSCDGNHTVHLSYIEVYNETVRDLLSPGRPLVLREDKQGIVAAGLTQYRAYSTDEVMALLQRGNQNRTTEPTRVNETSSRSHAILQVTVEYQARDGGMNVVNQVGKLSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGACNTVMIANISPSNLSFGETQNTLHWADRAKEIRTKVAEANEEIMKVPESDSDQAKLLLELQKENRELRVQLARQQQKLLTLQAQSLAAVASPTPSSATSLLTPPTSVHQNEKRKPRSSFLNGNCFTPESRKKGAEEGVRELRRTVKQLEAELEKTKKEHVVQLKHKDDLISELLKKSEKTAALVRGERVKRVETKTSLRPKEPSIGELKSPSHRFKSPAPTAKKRSFWDITTTNSPSVATINGRKTRSHVLAEPPPTAAPSMLRQPGFARQKP 894
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30670025 30674791 + CePI673135_06g017090.1 Cec06g1709 206446

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1709 894 Gene3D Kinesin motor domain 315 659 IPR036961 -
Cec06g1709 894 ProSitePatterns Kinesin motor domain signature. 553 564 IPR019821 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)
Cec06g1709 894 Coils Coil 752 786 - -
Cec06g1709 894 MobiDBLite consensus disorder prediction 714 759 - -
Cec06g1709 894 MobiDBLite consensus disorder prediction 847 865 - -
Cec06g1709 894 Coils Coil 678 705 - -
Cec06g1709 894 MobiDBLite consensus disorder prediction 191 223 - -
Cec06g1709 894 ProSiteProfiles Kinesin motor domain profile. 323 653 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec06g1709 894 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 323 698 IPR027417 -
Cec06g1709 894 PRINTS Kinesin heavy chain signature 554 572 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec06g1709 894 PRINTS Kinesin heavy chain signature 603 624 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec06g1709 894 PRINTS Kinesin heavy chain signature 406 427 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec06g1709 894 PRINTS Kinesin heavy chain signature 520 537 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec06g1709 894 PANTHER CENTROMERE PROTEIN E 321 803 IPR027640 GO:0003777(InterPro)|GO:0007018(InterPro)
Cec06g1709 894 SMART kinesin_4 321 661 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec06g1709 894 MobiDBLite consensus disorder prediction 714 729 - -
Cec06g1709 894 MobiDBLite consensus disorder prediction 816 894 - -
Cec06g1709 894 MobiDBLite consensus disorder prediction 816 830 - -
Cec06g1709 894 FunFam Kinesin-like protein 317 658 - -
Cec06g1709 894 Pfam Kinesin motor domain 329 653 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1709 K26157 - - csv:101222937 1396.33
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1502 Cec-Chr4:34542922 Cec06g1709 Cec-Chr6:30670025 4.80E-72 dispersed
Cec06g0918 Cec-Chr6:12437153 Cec06g1709 Cec-Chr6:30670025 1.90E-49 dispersed
Cec06g1709 Cec-Chr6:30670025 Cec10g1898 Cec-Chr10:33806410 8.70E-52 dispersed
Cec06g1709 Cec-Chr6:30670025 Cec04g0985 Cec-Chr4:29493126 2.90E-55 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g379 . . Bda06g00496 . . . . Bma12g00945 . . Cma10g00258 . Car10g00243 . . . . Bhi02g00015 . . . . . . Cla06g01495 Cam06g1649 Cec06g1709 Cco06g1707 Clacu06g1615 Cmu06g1564 Cre06g2376 . . Cone13ag0006 Cone19ag0005 . . . . . Blo15g00357 . . Bpe07g00737 . . Bma08g00253 . Cmo10g00275 . . . . . . Cpe18g00737 . . . . . . . . . . . . . . Lsi06g01359 Csa01g00353 Chy02g02390 Cme02g01775
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007142 1 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 0 1 1 34