Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1711 ATGCCACGACGCACGACGATCTCTTTCAATGGGCGCAATATATCAAACATTTGGAACAAAACCACAATAACCTCTGATAAAAATGCATATATCAACAATGCCCTTCCTCCACCACACCACCACCTCGATCGCCTCCTTCGATTCCGATCTTCTTCAACCGGTGGGATCGCCGTCGTCATTTTCCGGTTTCGCGTATTCGTTTTTTCCGTTGGCTTCTGGGACACCTCTCGAAGGTTCGATATGGAGCCGATGGACATAGTTGGAAAGTCTAAAGAGGACGCCTCGCTTCCAAAGGCGACTATGACCAAAATTATCAAAGAGATGTTACCCCCTGATGTACGGGTTGCAAGAGATGCCCAAGATCTTCTGATTGAGTGTTGTGTAGAGTTTATAAACCTTGTATCATCCGAGTCTAATGAAGTTTGTAGCAAAGAAGAAAAAAGAACAATTGCACCTGAACACGTGCTCAAGGCTCTTGAGGTGCTTGGTTTTAGTGAATACATTGAGGAAGTTTATGCTGCATATGAACAACACAGGCTCGAAACTATGCAGGACTCATTGAAAGGTGGGAAGTGGAGTAATGGAGCTGAGATGACCGAAGAAGAAGCTTTGGCTGAGCAGCAAAGAATGTTTGCTGAGGCACGTGCAAGAATGAATGGCAGTAACACTGCACCGAAGCAATCGGAGCCTGAGCAAAGTTTAGAGAGCTAA 711 45.43 MPRRTTISFNGRNISNIWNKTTITSDKNAYINNALPPPHHHLDRLLRFRSSSTGGIAVVIFRFRVFVFSVGFWDTSRRFDMEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30679842 30683472 - CePI673135_06g017110.1 Cec06g1711 206448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1711 236 MobiDBLite consensus disorder prediction 213 236 - -
Cec06g1711 236 MobiDBLite consensus disorder prediction 220 236 - -
Cec06g1711 236 Gene3D Histone, subunit A 84 225 IPR009072 GO:0046982(InterPro)
Cec06g1711 236 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 94 159 IPR003958 -
Cec06g1711 236 PANTHER PROTEIN DR1 HOMOLOG 81 234 IPR044255 -
Cec06g1711 236 FunFam Negative cofactor 2 beta 86 223 - -
Cec06g1711 236 SUPERFAMILY Histone-fold 92 222 IPR009072 GO:0046982(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1711 Cec-Chr6:30679842 Cec09g0592 Cec-Chr9:5127052 5.20E-12 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29815 PF00808 CBFD_NFYB_HMF 6.40E-22 CL0012 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1711 K21751 - csv:101214627 305.064