Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1749 ATGGAAGTTAATACCTACAATGATCCATTACACAAAATTCTCTTTAAATGGGAATATTACTCGCCTCGACAGCAAAAGATTGCACTCTTAGCACTTCTGATCTTTACAGCTTTCTATTCAACTGGGGCATATGATCCATTGGATCCAAATGGAAACATAACAATCAAATGGGATGTAGTCTCCTGGACGCCAGACGGATATGTAGCTGTAGTGACAATGAACAATTTTCAGATGTACCGCCATATCAATTCACCAGGATGGACTCTAGGCTGGTCGTGGGCCAAGAAAGAAGTAATATGGTCAATGGTGGGAGCTCAGACAACGGAACAAGGAGATTGTTCCAAGTTCAAAGGAAATGTCCCTCACTGTTGCAAGAAAAGCCCAGTAGTTGTTGATTTGCTCCCTGGTGTTCCTTACAATCAACAATTCTCCAATTGCTGCAAGGGTGGAGTATTGGCATCCTGGGGACAGGATCCAGCAGGTTCGGTCTCCGCCTTTCAGGTGAGTGTTGGGCTAGCCGGCACTTCAAACAAAACTGTAAAATTGCCAAAGAACTTCACTTTGCTCGGACCAGGACCAGGATACACATGTGGACCTGCAAAGGTTGTGCCTTCTACAGTCTTCCTTACTCCTGATCGCCGGCGGAAAACTCAAGCACTGATGACATGGAATGTAACCTGCACTTACTCACAATTTCTGGCCTCCAAGAACCCAACTTGCTGTGTATCACTCTCAACTTTCTACAATGATACAATCACTTCTTGCCCAACGTGTGCGTGTGGCTGCCAGAACAAACATAATTGTATAAAGAGTGACTCAAAGCTACTGCACAAGGATGGAATAAACACTCCTAAAAAGGATAATACACCTTTACTACAATGCACCCATCACATGTGTCCTGTTAGAGTACACTGGCACGTAAAGATTAATTACAAGGATTACTGGCGCGTGAAGGTTGCTGTAACTAACTTCAACTATAGGATGAACTATACGCTGTGGACACTGGCAGTGCAGCATCCAAATCTGAACAATGTAACTCAAGTCTTCAGTTTTGACTACAAGCCCCTTGTTCCCTATGAATCCATCAATGATACTGGCATGTTCTATGGCATGAAATTCTACAATGATCTATTAATGGAAGCAGGGCCATTTGGAAATGTACAATCTGAAGTACTCATGAAGAAGGACAAGGATACCTTTACCTTCAAGCAGGGTTGGGCATTTCCTAGAAAAGTATACTTCAATGGCGACGAATGTCAGATGCCACCGCCAGAATCATACCCATTTCTACCCAACTCTGCGCCTGGACGCTCCGGTGCAGTTACCAAATTAACCACCTCCTTGCTTTTGATAATCTGGTTTTTGTGGTGA 1371 43.76 MEVNTYNDPLHKILFKWEYYSPRQQKIALLALLIFTAFYSTGAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMNNFQMYRHINSPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKSPVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPAGSVSAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSLSTFYNDTITSCPTCACGCQNKHNCIKSDSKLLHKDGINTPKKDNTPLLQCTHHMCPVRVHWHVKINYKDYWRVKVAVTNFNYRMNYTLWTLAVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNVQSEVLMKKDKDTFTFKQGWAFPRKVYFNGDECQMPPPESYPFLPNSAPGRSGAVTKLTTSLLLIIWFLW 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31021881 31024295 + CePI673135_06g017490.1 Cec06g1749 206486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1749 456 Pfam COBRA-like protein 67 230 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cec06g1749 456 PIRSF COBRA 19 456 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cec06g1749 456 PANTHER PROTEIN COBRA 31 449 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1639 Cec-Chr5:26333362 Cec06g1749 Cec-Chr6:31021881 4.70E-28 dispersed
Cec06g1749 Cec-Chr6:31021881 Cec07g1712 Cec-Chr7:32659758 6.30E-224 dispersed
Cec06g1749 Cec-Chr6:31021881 Cec06g1750 Cec-Chr6:31024962 1.10E-188 tandem
Cec01g1708 Cec-Chr1:31716187 Cec06g1749 Cec-Chr6:31021881 2.70E-159 wgd
Cec05g1122 Cec-Chr5:10008630 Cec06g1749 Cec-Chr6:31021881 1.40E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1749 - - - 0.0