Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1750 ATGAGGTCTCGGCGTTTCGCTTCCACCGGATCCGTCGCCGACCTTACCGGCTTAGCCGTCTTGCTCATCTTTCTACTTTCCAGCTTCAGTTTCACTTCAACAGAAGCCTATGATGCACTTGATCCCAACGGGAACATCACAATCAAGTGGGATGTAATGAGCTGGACTCCAGATGGCTATGTTGCTGTTGTTACAATGTACAACTTCCAGCAATACCGCCATATTCAAGCTCCAGGTTGGACATTAGGGTGGACATGGGCAAAGAAAGAAGTCATTTGGAGCATGATGGGAGGCCAAACAACCGAACAGGGCGACTGTTCAAGATTCAAAGGAAATACTCCTCATTGCTGCAAGAAAGATCCAACCGTTGTAGATTTATTGCCAGGAACACCTTACAATCAGCAGATTGCAAATTGTTGCAAAGGTGGAGTGATAAACTCATGGGCCCAAGACCCCGGCAATGCAGCAAGTTCATTTCAAGTCAGTGTTGGTGCTGCAGGAACAAGTAACAAAACTGTTAGACTTCCTAAAAACTTCACGCTTAAAGCGCCAGGACCTGGATACACTTGTGGGCCAGCAAAGATTGTGAAGCCAACCAAATTTGTATCTGGAGATAAAAGAAGAGTAACTCAAGCTTTGATGACTTGGAATGTTACATGCACCTATTCTCAATTCCTTGCTCAGAAGACACCCACTTGTTGTGTTTCCCTCTCTTCCTTCTACAATGATACTATAGTCAACTGCCCAACCTGCACTTGCGGATGTCAAAACAACACGGCGGGTTCTGGGAGCTGTGTGGATCCAGATTCTCCATATTTGGCTTCAGTAGTATCAGCTCCTGATAAATCAGGCAACAATGCACCCTTGGTTCAGTGTACCAGCCACATGTGCCCCATTCGAGTCCATTGGCATGTGAAGCTGAATTACAAGGATTACTGGAGGGTGAAGATCACAATCACCAATTTTAATTACCGAATGAACTACACACTCTGGAATCTTGTGGTGCAGCACCCCAATTTTGATAATATTACTAAATTATTCAGCTTTAACTACAAGTCGTTGAGCCCATATGGTGACCTAAATGATACTGCGATGTTATGGGGAGTTAAGTTCTACAATGATCTGCTCAATCAAGCTGGTCCTCTTGGTAATGTGCAGTCTGAGCTCCTATTCCAAAAAGACCAGAACACTTTCACTTTTGACAAAGGTTGGGCTTTTCCAAGAAGAGTTTATTTCAATGGTGATAACTGTGTGATGCCACCTCCAGATGCCTATCCTTATTTGCCAAATGCCAGTTCCAGACCAGCTATATCTCTACTCATGACCATCTTAATATCTTTGGCATTACTGTTGAATTTTGCACAATAA 1368 43.93 MRSRRFASTGSVADLTGLAVLLIFLLSSFSFTSTEAYDALDPNGNITIKWDVMSWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSRFKGNTPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWAQDPGNAASSFQVSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVKPTKFVSGDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCQNNTAGSGSCVDPDSPYLASVVSAPDKSGNNAPLVQCTSHMCPIRVHWHVKLNYKDYWRVKITITNFNYRMNYTLWNLVVQHPNFDNITKLFSFNYKSLSPYGDLNDTAMLWGVKFYNDLLNQAGPLGNVQSELLFQKDQNTFTFDKGWAFPRRVYFNGDNCVMPPPDAYPYLPNASSRPAISLLMTILISLALLLNFAQ 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31024962 31027689 - CePI673135_06g017500.1 Cec06g1750 206487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1750 455 PIRSF COBRA 9 455 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cec06g1750 455 PANTHER PROTEIN COBRA 25 447 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Cec06g1750 455 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1122 Cec-Chr5:10008630 Cec06g1750 Cec-Chr6:31024962 3.80E-138 dispersed
Cec06g1750 Cec-Chr6:31024962 Cec07g1711 Cec-Chr7:32656333 7.90E-219 dispersed
Cec06g1749 Cec-Chr6:31021881 Cec06g1750 Cec-Chr6:31024962 1.10E-188 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1750 - - - 0.0