Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1765 ATGGCGTCCGCTAAGCGATGCCATTACGAGGTACTCGGCCTCCACATCGACTGCACCGCCGACGAGATTCGATCGGCGTACCGGAAGCTAGCCCTCCAGCGCCACCCCGATAAGCTCGTCCAGTCCGGTTTGTCGCAAGCTGATGCCACCGCTCAGTTTCAAGAGCTCCAGCACGCGTACGAGGTCCTCTCCGATCCTAAAGAACGAGCCTGGTACGATTCTCATCGTTCTCAAATCCTCTTTTCTGATGCTGGATCGGTTAATTCCAACTCTGTTGTTCCCAATCTCTTTCCGTTCTTCTCCAATACCGTTTATTCTGGCTATTCGGATTCTGGACGAGGGTTCTATAAGATCTATTCTGACCTTTTTGATAAAATTTACGGTAATGAGATTAATTTCGCTAAGAAATTAGGATTGCGGTTGGATATGGTTCGTGAAGCTCCAGTTATGGGGAATTTAGATAGTCCGTATACGCAGGTGACTGCGTTTTATAATTACTGGCTTGGGTTTTGTACGGTTATGGATTTTTGCTGGGCTGATCAGTACGATGTCATGGCCGGTCCCAACCGGAAATCGAGAAGGTTAATGGAGGAGGATAACAAGAAGCTGAGGAAGAAGGCAAAGAGGGAGTATAATGAGACAGTGAGAGGTTTGGCTGAGTTTGTGAAGAAGAGAGATAAAAGGGTGATTGATATGGCTATGAAAAGGAACATGGAAATGGAGAAGAAGAAGGAAGAGGAGAGGGAGAGGAAAAAAAGGTTAGAGAGGGAGAAGATGGAGAAGCTTAGGGCATATGAGGAACCAGAATGGGTAAAGGTTGAGGAAGTTGAGGAGGATGAGGAAGATGGGTTTGAGGAAGAGAATAGGAGAGGGAAAGAGCTGTACTGTGTTTTGTGTGGGAAAAAGTTCAAGAGTGAAAAGCAATGGAAGAATCACGAACAGTCAAAAAAGCACAAGGAGAAGGTAGCAGAGTTCAAAGAATCACTAGATGATGAGGATGAATCTGAAGAATTTGTTGATGAAGAAGAAACAACACTGCTGGATGATGAGGTAGATAAACTAGGGGAGGAGCTCAAGGAAAGTTTTGATATTGAGGAAGCAGAAATTGAAAGTGGGGGAGAACTTAGTGGGAGTGAATATAATGATGTTCATGAAGTTGATGGATCAGATATGGTTGCTGAGGCACTTGGATCGAATGACGACGATGAAGACGAAACAGATGTTCTTGAAGCAATGGCTGCTGGGTTGCAAAATAGGAAAAATGCAGCTTCAGTGAATCAGCTTAAAGCTTCCCCAGTCAAAGCTCATTTTGAAAATGAGAACGATGAGCCTAGTCCGGCAGAATTCGAAAATGGTAAGAGGGGAAAAAAGAATCGTCGAGCCAAAAAGAAGGGCAAGGGAAATGATGAAGCTATGAATGAACTAGATTCTCAAAATGACAAAAACAACGGAGACGATTCATCGTATCAGCAGGATTCCCCATCCAATTCGTTGCATAAGGATGAAAGTAGTGATAAGGGGACCAGTGAGTGGGCTAAAGAACAAAGGACTTCAAGTAAATCAGCTGATCGGAAAACAGTGGTGCAGAATGATACAAAGATCAACCCTAGACACTCATCTAAAGGAAAGAAATCCAAGGCAACATCGAAGGATTCTGGCAATTCATGTGAAACATGTGGAGAGCAATTTGACTCGAGGAATAAATTGCATAAGCATTTGGGAGCCACAGGACATGCTGCTTTAAAATATCGATGA 1755 43.99 MASAKRCHYEVLGLHIDCTADEIRSAYRKLALQRHPDKLVQSGLSQADATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDAGSVNSNSVVPNLFPFFSNTVYSGYSDSGRGFYKIYSDLFDKIYGNEINFAKKLGLRLDMVREAPVMGNLDSPYTQVTAFYNYWLGFCTVMDFCWADQYDVMAGPNRKSRRLMEEDNKKLRKKAKREYNETVRGLAEFVKKRDKRVIDMAMKRNMEMEKKKEEERERKKRLEREKMEKLRAYEEPEWVKVEEVEEDEEDGFEEENRRGKELYCVLCGKKFKSEKQWKNHEQSKKHKEKVAEFKESLDDEDESEEFVDEEETTLLDDEVDKLGEELKESFDIEEAEIESGGELSGSEYNDVHEVDGSDMVAEALGSNDDDEDETDVLEAMAAGLQNRKNAASVNQLKASPVKAHFENENDEPSPAEFENGKRGKKNRRAKKKGKGNDEAMNELDSQNDKNNGDDSSYQQDSPSNSLHKDESSDKGTSEWAKEQRTSSKSADRKTVVQNDTKINPRHSSKGKKSKATSKDSGNSCETCGEQFDSRNKLHKHLGATGHAALKYR 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31180342 31182433 + CePI673135_06g017650.1 Cec06g1765 206502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1765 584 Pfam DnaJ domain 8 73 IPR001623 -
Cec06g1765 584 SMART dnaj_3 6 68 IPR001623 -
Cec06g1765 584 ProSiteProfiles Zinc finger C2H2 type domain profile. 554 583 IPR013087 -
Cec06g1765 584 Pfam Zinc-finger double-stranded RNA-binding 294 319 IPR022755 -
Cec06g1765 584 MobiDBLite consensus disorder prediction 418 561 - -
Cec06g1765 584 MobiDBLite consensus disorder prediction 308 344 - -
Cec06g1765 584 MobiDBLite consensus disorder prediction 498 531 - -
Cec06g1765 584 Gene3D DnaJ domain 1 90 IPR036869 -
Cec06g1765 584 MobiDBLite consensus disorder prediction 482 497 - -
Cec06g1765 584 Coils Coil 193 213 - -
Cec06g1765 584 MobiDBLite consensus disorder prediction 329 344 - -
Cec06g1765 584 MobiDBLite consensus disorder prediction 464 481 - -
Cec06g1765 584 Pfam Zuotin-like, zuotin homology domain 143 229 IPR054076 -
Cec06g1765 584 SUPERFAMILY Chaperone J-domain 4 97 IPR036869 -
Cec06g1765 584 CDD DnaJ 7 65 IPR001623 -
Cec06g1765 584 MobiDBLite consensus disorder prediction 308 328 - -
Cec06g1765 584 SUPERFAMILY beta-beta-alpha zinc fingers 285 338 IPR036236 -
Cec06g1765 584 MobiDBLite consensus disorder prediction 435 455 - -
Cec06g1765 584 Gene3D Classic Zinc Finger 280 341 - -
Cec06g1765 584 ProSitePatterns Zinc finger C2H2 type domain signature. 556 578 IPR013087 -
Cec06g1765 584 PRINTS DnaJ domain signature 48 68 IPR001623 -
Cec06g1765 584 PRINTS DnaJ domain signature 27 42 IPR001623 -
Cec06g1765 584 PRINTS DnaJ domain signature 9 27 IPR001623 -
Cec06g1765 584 ProSitePatterns Zinc finger C2H2 type domain signature. 296 318 IPR013087 -
Cec06g1765 584 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 2 584 IPR044648 -
Cec06g1765 584 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Cec06g1765 584 SMART ZnF_U1_5 291 325 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
Cec06g1765 584 Coils Coil 230 264 - -
Cec06g1765 584 SMART c2h2final6 294 318 IPR013087 -
Cec06g1765 584 SMART c2h2final6 554 578 IPR013087 -
Cec06g1765 584 ProSiteProfiles dnaJ domain profile. 7 76 IPR001623 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1765 Cec-Chr6:31180342 Cec09g0540 Cec-Chr9:4643795 1.80E-13 dispersed
Cec06g1765 Cec-Chr6:31180342 Cec01g0584 Cec-Chr1:6187467 2.40E-10 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29821 PF00226 DnaJ 4.00E-21 CL0392 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1765 K09506 - csv:101217729 922.924