Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g1798 ATGGGAGGAGAATTTTCTAGGGCTCCAAACCCTCGAATTCCCTTCTCCTCCCTTCTCCTCCTCCTCCTCTCTCTCTGCCTGTCCGCCGCTCTCTCCGCCGCCCAAACCCCCTCATTCCGTTCCTTCTCCCCTCGCGACGCTTATTTGATCAACTGCGGCTCCCCGGACCAAACCCGTCTCGACGACGGCCGGATTTTCAAATCCGATCGCGAATCCACTTCTCTCCTTTCCACCGAAGAAGACGTTCAGATTTCCGTCGATTCCATTCCCTCAAACGCCGCTGTTTCGCCTCTCTCTTCTTGGTCATTACCTCTATTTCGCTCCGCTAGAATTTTCCCCGACGATTCCACCTACACTTTCTTCATTTCTCAGCCCGGCCGCCATTGGATCCGCCTCTACTTTTACCCTCTTCCTCACCCTAATTACAATCTCTCCGATTCCGTTTTCACCGTCACCACCGATACCTTCGTCCTCCTCCATGATTTCTCAATCAAACCCAATCCAAAAATCGTCTTCAAGGAGTACCTAATCAACATTACCACCGATCGATTCTCCCTCCAGTTCAAACCTAAGAAGAATTCCTTCGCCTTCGTCAATGCCATTGAAATCGTCTCCGCTCCAGATCCTCTTTTTTCCGATTCCGCCAACTCTGTTTCTCCGGTGGGATTTTTCAACGGATTGTCGAACATTGCTCTGCAAATTTGCTACCGTGTTAATGTGGGTGGCCCTGAACTTGTTCCTAAAAACGATACGCTGTCAAGAACATGGGAAACGGATTATGCTTACAACAAATTTCCACAGGGTTCTAAAAATGTTTCTGTGGCTTTGAACTCCATTAGATACCCTGGAGATGAAGTGACTCCATTAATTGCTCCTAATTGGGTTTATGCAACTGCAGAGGATCTCCAAGATCCTGAAACGATTCAAGTAAATTTCAATATGAGTTGGAGTTTCAATGTGGAACCGAGTTACTCGTATTTGATCAGACTCCATTTCTGTGACATTGTGAGCAAAGTCCTCAACAGTTTGTACTTCAATGTCTACATCAATGGGATGATGGGTATTGCAGATCTTGATCTTTCTCAACTAACTGGTGATCTTTCCACTCCATACTATAGAGACCTTGTTCTCAATGCCTCTGACATCAAGAACAACACCATCATGATTCAGGTTGGTCCATCAAATTTGGATTCAGGGCTTCAAGATGCGATTCTGAATGGAGTGGAAATCATGAAGATGAGTAACGATGCACAAAGCTTGGATGGTTTGTTTTCAGTGGATGGGACATACATGGGAGGCTCAAGATTTAGCACAATGAAGATTGTAGCTGCTGTAGCACTTGGAATGGCAGCCATTGCCATTGTATTAGTTGGAGTAATGTTCTTGAGATGGCAAAAAAGGCCTCAGGGATGGGAGAAGAGAAACAGTTTCTCTTCATGGCTTCTTCCTTTGAATTCAACTCACACTGCCAGTTTCTTCTCTTCAAAAAGCAGCTCCAGAAGATCATCAACCGTTTTTAGCTCTCGAAGGAGCAGGACTGGCCTCTCAGCCATTTACTCCAATGTCGGTCTTGGCCGTTTCTTCTCCCTCAACGAGTTACAGGCTGCTACCCAAAACTTCGAGGAGAAAGCAGTGATCGGCGTTGGTGGATTCGGCAAAGTCTACGTCGGAGCATTAGAAGATGGAACCAAAGTCGCCATTAAACGTGGAAACCCTAGTTCTGATCAAGGCATTAACGAGTTCAGAACTGAGATCGAAATGCTGTCTAAACTCCGCCATCGCCATCTCGTTTCTCTAATCGGTTACTGCGACGAGCAATCCGAGATGATTCTGGTTTACGAGTACATGGCCAATGGCCCATTTCGCGACCACTTGTATGGCTCTAATCTCCCTCCTTTGTCTTGGAAACAGAGGCTCGAAATCTGTATCGGCGCTGCCCGTGGCCTTCACTATCTCCACACTGGTGCGGCTCAGGGCATAATCCACCGTGATGTCAAGACCACTAACATTCTTCTTGATGAAAATTTTGTTGCCAAAGTTGCTGATTTTGGGCTTTCCAAAGCTGCGCCATCTTTGGAACAGACCCATGTGAGCACTGCAGTCAAGGGAAGTTTTGGTTACCTTGATCCTGAGTACTTCAGAAGACAGCAACTCACTGAGAAATCTGATGTTTACTCATTTGGGGTTGTTCTTTTTGAGGTTCTTTGTGCAAGACAAGTCATCAATCCCACATTGCCGCGTGAGCAGGTAAATTTGGCGGAGTGGGCAATGCAAAATTACAGAAAAGGAAAGCTAGAGAAGATAATTGATCCACAAATTAGCAGCTCAATTGTAGAGGGGTCACTGAAGAAATTTGTGGAAGCAGCAGAGAAATGCTTGGCTGAATATGGGGTTGATAGACCAAGCATGGGAGATGTGCTATGGAACTTAGAATACGCTTTGCAGCTACAAGAGGCTGTATCAGAGCTCGAGGACCCTGAGGAAGACAAATGCGAAGGCCTTGTGGCTTTGGACAAACCAAATGACAATGAACCAAAAGGAGGTACAAGTGCTTCTGTAAGTGATGATATTTCTGAAGTTTCAGTTAGTGCTCCTTTGTTTTCAGAAGTTCAAAATTTTCAGGGAAGATAA 2631 45.8 MGGEFSRAPNPRIPFSSLLLLLLSLCLSAALSAAQTPSFRSFSPRDAYLINCGSPDQTRLDDGRIFKSDRESTSLLSTEEDVQISVDSIPSNAAVSPLSSWSLPLFRSARIFPDDSTYTFFISQPGRHWIRLYFYPLPHPNYNLSDSVFTVTTDTFVLLHDFSIKPNPKIVFKEYLINITTDRFSLQFKPKKNSFAFVNAIEIVSAPDPLFSDSANSVSPVGFFNGLSNIALQICYRVNVGGPELVPKNDTLSRTWETDYAYNKFPQGSKNVSVALNSIRYPGDEVTPLIAPNWVYATAEDLQDPETIQVNFNMSWSFNVEPSYSYLIRLHFCDIVSKVLNSLYFNVYINGMMGIADLDLSQLTGDLSTPYYRDLVLNASDIKNNTIMIQVGPSNLDSGLQDAILNGVEIMKMSNDAQSLDGLFSVDGTYMGGSRFSTMKIVAAVALGMAAIAIVLVGVMFLRWQKRPQGWEKRNSFSSWLLPLNSTHTASFFSSKSSSRRSSTVFSSRRSRTGLSAIYSNVGLGRFFSLNELQAATQNFEEKAVIGVGGFGKVYVGALEDGTKVAIKRGNPSSDQGINEFRTEIEMLSKLRHRHLVSLIGYCDEQSEMILVYEYMANGPFRDHLYGSNLPPLSWKQRLEICIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARQVINPTLPREQVNLAEWAMQNYRKGKLEKIIDPQISSSIVEGSLKKFVEAAEKCLAEYGVDRPSMGDVLWNLEYALQLQEAVSELEDPEEDKCEGLVALDKPNDNEPKGGTSASVSDDISEVSVSAPLFSEVQNFQGR 876
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31457423 31463627 - CePI673135_06g017980.1 Cec06g1798 206535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g1798 876 SMART serkin_6 540 813 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1798 876 MobiDBLite consensus disorder prediction 835 857 - -
Cec06g1798 876 PANTHER OS07G0166700 PROTEIN 528 818 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cec06g1798 876 ProSitePatterns Protein kinases ATP-binding region signature. 546 568 IPR017441 GO:0005524(InterPro)
Cec06g1798 876 Gene3D - 230 416 - -
Cec06g1798 876 Gene3D - 46 207 - -
Cec06g1798 876 Pfam Protein tyrosine and serine/threonine kinase 543 802 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1798 876 ProSiteProfiles Protein kinase domain profile. 540 813 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec06g1798 876 FunFam Receptor-like protein kinase FERONIA 231 415 - -
Cec06g1798 876 FunFam Receptor-like protein kinase FERONIA 616 830 - -
Cec06g1798 876 CDD STKc_IRAK 546 811 - -
Cec06g1798 876 Gene3D Phosphorylase Kinase; domain 1 502 615 - -
Cec06g1798 876 FunFam Putative receptor-like protein kinase 47 207 - -
Cec06g1798 876 SUPERFAMILY Protein kinase-like (PK-like) 514 811 IPR011009 -
Cec06g1798 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec06g1798 876 Pfam Malectin-like domain 50 412 IPR024788 -
Cec06g1798 876 Gene3D Transferase(Phosphotransferase) domain 1 616 833 - -
Cec06g1798 876 FunFam receptor-like protein kinase FERONIA 502 615 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2167 Cec-Chr2:39119857 Cec06g1798 Cec-Chr6:31457423 1.40E-216 dispersed
Cec04g2228 Cec-Chr4:40049639 Cec06g1798 Cec-Chr6:31457423 1.30E-177 dispersed
Cec06g1330 Cec-Chr6:26670479 Cec06g1798 Cec-Chr6:31457423 1.90E-52 dispersed
Cec06g1798 Cec-Chr6:31457423 Cec11g1886 Cec-Chr11:33090248 6.60E-238 dispersed
Cec06g1798 Cec-Chr6:31457423 Cec09g0234 Cec-Chr9:2017553 8.30E-257 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72105 PF12819 Malectin_like 3.00E-35 CL0202 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g1798 - - - 0.0